New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3150551 =	NA (NA)	3 (0.050)	3/262	9.7	NA	intergenic (+5/+267)	yghA/exbD	putative oxidoreductase/membrane spanning protein in TonB‑ExbB‑ExbD complex
	?	NC_000913	3150580 =	NA (NA)					noncoding (27/255 nt)	RIP222 (repetitive extragenic palindromic) element; contains 5 REP sequences and 2 IHF sites	RIP222 (repetitive extragenic palindromic) element; contains 5 REP sequences and 2 IHF sites
Rejected: Coverage evenness skew score above cutoff.

TTTGGTCAGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCA  >  NC_000913/3150409‑3150692                                                                                                                                               |                                                                                                                                              tttGGTCAGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTaaaaaaa                                                                                                                                               >  1:1039326/1‑143 (MQ=255) tttGGTCAGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTAATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGAGCGGCGGCGAGCATCTAGGTTaaaaaaa                                                                                                                                               >  2:715634/1‑143 (MQ=255)  ttGGTCAGCAAACGACGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAAt                                                                                                                                              <  2:2953/143‑1 (MQ=255)    gggcAGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGGCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGc                                                                                                                                            <  2:1193165/140‑1 (MQ=255)        aGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCgg                                                                                                                                        >  1:198522/1‑143 (MQ=255)          cAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCGCGGtt                                                                                                                                      >  2:522117/1‑143 (MQ=255)          cAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGGCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGtg                                                                                                                                      >  1:257676/1‑142 (MQ=255)          aaaaCGCCGATGACACGTGCGGCGCAACCGGCGGAACTGTCCACTGTATAAGATGATCACGCAAGTCAGGAGTCGACCTACGTTACCCCAGAAGTCCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGtt                                                                                                                                      <  2:72939/142‑1 (MQ=255)             aCGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTtgtg                                                                                                                                   >  1:197221/1‑143 (MQ=255)                 cGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGaaaa                                                                                                                               <  1:32309/143‑1 (MQ=255)                           tGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGc                                                                                                                     <  1:769305/143‑1 (MQ=255)                            gCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGca                                                                                                                    <  1:1151179/143‑1 (MQ=255)                             cGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACGGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGcat                                                                                                                   >  2:602113/1‑143 (MQ=255)                                 tcttttggcggAGCTGGCCCCCGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCAtt                                                                                                               <  1:864662/137‑1 (MQ=255)                                 gggaCCGGCGTAAGTGGCGTCTGTATATGTGTAGCGGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGGGGGGGGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCAtt                                                                                                               <  2:152907/140‑1 (MQ=255)                                 gCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCAtt                                                                                                               <  1:1013584/143‑1 (MQ=255)                                 gCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCAGTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCAACAtt                                                                                                               >  2:991338/1‑143 (MQ=255)                                  cgaCCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATtg                                                                                                              <  2:372455/141‑1 (MQ=255)                                  cAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATtg                                                                                                              >  1:325940/1‑143 (MQ=255)                                     ccGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCATGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGa                                                                                                           >  2:223986/1‑143 (MQ=255)                                      cggcggAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGGGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGaa                                                                                                          >  1:390761/1‑143 (MQ=255)                                       ggcggAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGCACAGCCACCGGGCATCATTGTGAAt                                                                                                         >  1:744430/1‑143 (MQ=255)                                          ggAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCa                                                                                                      <  2:632264/143‑1 (MQ=255)                                               tgcccccTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCtt                                                                                                 <  1:633130/140‑1 (MQ=255)                                               tGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCtt                                                                                                 >  1:1124416/1‑143 (MQ=255)                                                 gCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTAc                                                                                               <  2:1039326/143‑1 (MQ=255)                                                  ccccTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTAcc                                                                                              <  2:250132/143‑1 (MQ=255)                                                   cccTGTATATGTTTACCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCGCGGCGTGTGCGGCGGCGAGCATTTCGGTTAAAAAAATGCCCGGTTGTGAGCAGCCACCGGCGATCCTTGTGAGTTCACTCTCACCt                                                                                             >  2:372287/1‑143 (MQ=255)                                                      tGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGAt                                                                                          >  2:688171/1‑143 (MQ=255)                                                           atGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGTTTAAAAAAATGCCCGGTTGTGAAAAGAAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGc                                                                                     <  1:944243/143‑1 (MQ=255)                                                            tGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCATCCCTGATGTGGCg                                                                                    >  2:639867/1‑143 (MQ=255)                                                             gTTTATCTGGCAAGTCAGGAGTCGAGGTACGTCACCGCAGAAGTGCACGGCGTGTACGGCGGCGAGCATGTAGGTTAAAAAAATGCCCAGGTGTGAACAGCAACCGGGACTCCTTGTGGATTCACTCTTCCCTGATGTGCCGa                                                                                   >  1:841056/1‑143 (MQ=255)                                                             gTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGACGTGGCGa                                                                                   >  2:1058849/1‑143 (MQ=255)                                                                taccTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGaaaa                                                                                <  1:692619/140‑1 (MQ=255)                                                                 aTCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAAc                                                                               >  1:10082/1‑143 (MQ=255)                                                                  tCTGGCAAGTCAGGAGTCGAGCTACGTCACCTCATAAGTTCACGTGGTGTGCGGCGGCGAGCATTTAGGTTAAAAATATGCCCGGGTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAGACg                                                                              >  2:796103/1‑143 (MQ=255)                                                                  tCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCAGTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCAATGTGAATTCACTCTTACCTGATGTGGCGAAAACg                                                                              >  2:525622/1‑143 (MQ=255)                                                                   ctcgCAAGTCAGGAGTCGCGCTACGTCACCGGAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAGAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCTCTCTTACCTGATGTGGCGAAAACGc                                                                             <  2:1022091/140‑1 (MQ=255)                                                                   cTGGCAGGGCAGGAGGCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGc                                                                             <  2:272063/143‑1 (MQ=255)                                                                      gCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCtt                                                                          >  2:460187/1‑143 (MQ=255)                                                                       gaaGTCAGGGGGGGGGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATCGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTa                                                                         <  2:1004805/142‑1 (MQ=255)                                                                       cAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGCATTCACCCTTACCTGCTGTGGCGGAAGCGCCTTa                                                                         >  1:628324/1‑143 (MQ=255)                                                                        aaGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTAt                                                                        >  1:892995/1‑143 (MQ=255)                                                                            cAGGAGGCGAGCTACGTCCCCGCAGAAGTTCACGGCTTGTGCGGCGGCGCGCATTTAGGTTACAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGc                                                                    <  1:320913/143‑1 (MQ=255)                                                                                 gTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACa                                                               >  1:171271/1‑143 (MQ=255)                                                                                   cGAGCTACGTCACTGCAGCAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACaaa                                                             <  2:1025235/143‑1 (MQ=255)                                                                                    gAGCGACGTCACCGCAGAAGGGCACGGCGTGTGCGGCGGCGAGCATGTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAAc                                                            <  1:975183/143‑1 (MQ=255)                                                                                      gCTACGGCACCGCAGAAGGGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGc                                                          <  2:293629/143‑1 (MQ=255)                                                                                         aCGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATg                                                       >  2:224879/1‑143 (MQ=255)                                                                                          cGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGa                                                      <  1:520518/143‑1 (MQ=255)                                                                                           gccACCGCACAAGAGCACGCCGTCTGCCGCGGCGAGCACTTAGGTTAAAAAAATGTCAGCTTGTGAAAAGCAACCGGGCATCATTGTGACTTCACGCGTACACGCTGTGGCGTAGTCGCCTTATCCGCCTACAAACGCATGaa                                                     <  2:484807/141‑1 (MQ=255)                                                                                            tCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAg                                                    >  2:286537/1‑143 (MQ=255)                                                                                                cGCAGAAGCGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTc                                                <  1:384586/143‑1 (MQ=255)                                                                                                  cAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCaa                                              <  1:1085734/143‑1 (MQ=255)                                                                                                   aGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAAc                                             >  2:192020/1‑143 (MQ=255)                                                                                                        ggCAGGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGtt                                        <  2:608470/142‑1 (MQ=255)                                                                                                             ggCGTGTGCGGCCGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAAt                                   <  1:857382/143‑1 (MQ=255)                                                                                                                gtgtGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTAAACATGTTGCAATAGa                                >  1:660623/1‑143 (MQ=255)                                                                                                                    gcggcggcgAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGTGCATCATTGGGAATTCGCTCTTACCTGATTTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGAtttt                            <  1:796103/143‑1 (MQ=255)                                                                                                                     cggcggcgAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTg                           >  2:170111/1‑143 (MQ=255)                                                                                                                          gcgAGCACTTAGGTTCAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGc                      <  1:76379/143‑1 (MQ=255)                                                                                                                            gAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTAc                                                                <  1:802757/99‑1 (MQ=255)                                                                                                                            gAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTAc                                                                >  2:802757/1‑99 (MQ=255)                                                                                                                               cATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACACACGCCTGCAGATTCACCATGTTGCAATAGATTTTGTAAGCCTGac                 >  1:297921/1‑142 (MQ=38)                                                                                                                               cATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGAt                 >  1:244030/1‑143 (MQ=255)                                                                                                                                  ttAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCCACAGATTTTGTAGGCCTGATAAg              >  1:175246/1‑143 (MQ=255)                                                                                                                                      gTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTa          >  1:532557/1‑143 (MQ=255)                                                                                                                                      gTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTa          <  1:280791/143‑1 (MQ=255)                                                                                                                                       ttAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAg         >  1:281544/1‑143 (MQ=255)                                                                                                                                        tAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGGAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAgc        >  1:1086151/1‑143 (MQ=255)                                                                                                                                           aaaaaTGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCa     >  1:800105/1‑143 (MQ=255)                                                                                                                                             aaaTGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATc   <  1:460187/143‑1 (MQ=255)                                                                                                                                              taTGCTCGTTTGTGAAAAGCAACCGCGCATTATTGTGTATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATGCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCa  <  1:57316/142‑1 (MQ=25)                                                                                                                                               |                                                                                                                                              TTTGGTCAGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAAAAAAATGCCCGGTTGTGAAAAGCAACCGGGCATCATTGTGAATTCACTCTTACCTGATGTGGCGAAAACGCCTTATCCGCCTACAAACGCATGAAGATTCAACATGTTGCAATAGATTTTGTAGGCCTGATAAGCGTAGCGCATCA  >  NC_000913/3150409‑3150692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.