New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3877665NA (NA)4 (0.060) 4/270 9.2 NA noncoding (80/98 nt) RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3877676 NA (NA)noncoding (91/98 nt) RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 166 total aligned reads displayed.

AATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCA  >  NC_000913/3877524‑3877804
                                                                                                                                             |                                                                                                                                            
attggCGGATTGCAGAAATAAAAAGGGCGGGGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa                                                                                                                                             <  2:1058788/139‑1 (MQ=255)
aaTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCAGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa                                                                                                                                             <  2:721212/143‑1 (MQ=255)
 aTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCACGATTTTCGCAGGCCTGCTaa                                                                                                                                            >  2:693510/1‑143 (MQ=255)
 aTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa                                                                                                                                            <  2:659720/143‑1 (MQ=255)
 aTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa                                                                                                                                            <  1:89517/143‑1 (MQ=255)
  ttGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCGCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATGCAATACATTGCAAGATTTTCGTAGGCCTGATAAg                                                                                                                                           <  2:291964/143‑1 (MQ=255)
      ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAAAGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGCTTTTCGTAGGCCAGATAAGCGTa                                                                                                                                       >  2:197730/1‑143 (MQ=255)
      ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTCCCTATAGCAATGTACCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTa                                                                                                                                       <  1:1191838/143‑1 (MQ=25)
             aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTAACGTGCCTGCAACCTCACGAAACTTCAATACATTGCAAGATTTTGGTAGGTCTGATAAGCGTAGCGCAta                                                                                                                                >  2:532323/1‑142 (MQ=37)
              taactAAACAGGGCGGAGATGCTCTCCGCCCTTTTCTTATAGCTTCTTTCCGTATGCGGCGTGAACGCCTTATCCGGCTTAGAAAATCATTAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCa                                                                                                                               <  2:538992/139‑1 (MQ=21)
              gAAATAAGAAGGACGGGTGTGATCTCCGGCCGTTTCTTAGAGCTTCGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCa                                                                                                                               <  2:832573/143‑1 (MQ=18)
              aaaaTAAAAATTGCGGAGATGATCTTCTCTTTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCTGCTTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCa                                                                                                                               <  2:209335/142‑1 (MQ=21)
                aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                                                             <  2:457334/143‑1 (MQ=255)
                aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAgg                                                                                                                             <  1:567939/143‑1 (MQ=255)
                    aaaaGGGCGGAGATCATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTCCAAGCTTTTCGAAGGCCTGATAAGCGTAGCGCATCGAGCACg                                                                                                                         >  2:234740/1‑143 (MQ=25)
                     aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGc                                                                                                                        >  1:995807/1‑143 (MQ=255)
                           cGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCAt                                                                                                                  <  1:210773/143‑1 (MQ=255)
                              aggtggtctcCGCCCTTTTCTTATCGCTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGt                                                                                                               <  2:278824/137‑1 (MQ=255)
                                atgatCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTa                                                                                                             >  2:828279/1‑143 (MQ=255)
                                   ctctcCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcg                                                                                                          <  1:379122/142‑1 (MQ=255)
                                   atCTCCGCCCTTTCCTGATAGCTTCTTGCCGGATGCGGCGTGCACGCCTTATCCGGCCTACAAAATCATGTAAATGCACTACATTGCAAGTTTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcg                                                                                                          <  1:534117/143‑1 (MQ=21)
                                    tctcCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACACAATCATGAAAATTCAATACATTGCAAGCTTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcgc                                                                                                         >  2:290484/1‑143 (MQ=255)
                                       ccGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGCACGCCTTATCCGGCCTACAAAATCATGAAAATTCACTACATTGCAAGATTTTCGTAGGCCGGATAAGCGTAGCCCATCGAGCACGCCCGCATCGTTAgcgcgct                                                                                                      >  2:498989/1‑140 (MQ=21)
                                       ccGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATCAGCGTAGCGCGTCAGGCACGCTCGCATGGTTAGCGCCAt                                                                                                      >  1:40514/1‑143 (MQ=255)
                                             ttttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAata                                                                                                >  2:95230/1‑143 (MQ=255)
                                             ttttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATAATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATAAGGCACGATAGCATGGTTGGCGCAATTAAata                                                                                                >  1:674801/1‑143 (MQ=21)
                                              tttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAatat                                                                                               <  1:1172279/143‑1 (MQ=255)
                                                tCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCACATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCg                                                                                             <  1:280333/143‑1 (MQ=255)
                                                  ttATAGCTTCTTGCCGAATGCAGCGTGAAAGACACAACATAACGACAAAATCATGAAAATTCAATAGAGTGCAGGAGTGTCGAAAGCCGGAATACCACAGCGGAACAGGCACGCTCGCTTGGTTAGCGCCATTAGATGTCGac                                                                                           >  2:22088/1‑142 (MQ=255)
                                                    ataGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCGCGCATGGTTAGCGCCATTAAATATCGatat                                                                                         >  1:84714/1‑143 (MQ=255)
                                                     taGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAtt                                                                                        >  1:1129728/1‑143 (MQ=255)
                                                     taGCTTCTTGCCGGATGCGGCGGGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAtt                                                                                        >  1:626880/1‑143 (MQ=255)
                                                      aGCTTTTTGCCGAATGCGGCGTGAACGCCTTTTCCGGCCTACAAAAGCATGAAAAGTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTc                                                                                       <  2:1094830/143‑1 (MQ=21)
                                                      aGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTc                                                                                       <  1:775034/143‑1 (MQ=255)
                                                       gCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcg                                                                                      >  2:28731/1‑143 (MQ=255)
                                                        cttcttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgc                                                                                     >  1:253060/1‑143 (MQ=255)
                                                        cttcttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgc                                                                                     <  2:941238/143‑1 (MQ=255)
                                                         ttcttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgcc                                                                                    >  1:416684/1‑143 (MQ=255)
                                                          tcttGCCGGAGGCGCCGTGAACGCCGTATCCGACCTACCAAAGCATGCAACGTCAATACAATGCAAGATTGTCGTAGGCCTGATAAGCGTAGAGCATCAGGTACAGGGACAAGATGATGCCCATTAAATATCGATATTcgccg                                                                                   <  2:370288/143‑1 (MQ=9)
                                                              gCCGGGTGCGGCGGGAGCGCCTTATCCGGGCTACAAAAGCGTGAAAATTCAAGACATTGCAAGATTTTCGTAGGCCGGCTAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCttt                                                                               <  2:302649/143‑1 (MQ=25)
                                                               ccagATGTGGCGTGATCGCCGTATCCGGCCTACAAAATCATAAAACGCCTATTCACTGCGAGATTTTCGTAGGCGTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTc                                                                              <  2:194297/140‑1 (MQ=25)
                                                               ccGGCTGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCCAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCCCGCTCGCATGGTTAGCGCCATTAGAGATCGATATTCGCCGCttcc                                                                              >  1:294530/1‑141 (MQ=21)
                                                                 ggAGGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAg                                                                            <  1:650232/143‑1 (MQ=255)
                                                                  gATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAGTTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAACTATCGATATTCGCCGCTTTCAgg                                                                           >  1:911364/1‑143 (MQ=255)
                                                                  gATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCGTCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAgg                                                                           <  2:753716/143‑1 (MQ=255)
                                                                  gATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCACTAAATATCGATATTCGCCGCTTTCAgg                                                                           >  1:509022/1‑143 (MQ=255)
                                                                       ggcgTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGtt                                                                      <  1:569185/143‑1 (MQ=255)
                                                                         cgTGGACGCCTTGTCCGGCCTTCAAAATCATGAAAATTCATTACGTTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtct                                                                   <  2:1014004/143‑1 (MQ=37)
                                                                          tccaaCGCCGCATCCGGCCTACAAAACCATGAAAATTCAAGACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtctc                                                                  <  1:433872/140‑1 (MQ=37)
                                                                          gTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCCGGGCGTtctc                                                                  >  1:1035622/1‑143 (MQ=255)
                                                                           tGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTctct                                                                 <  1:516140/143‑1 (MQ=255)
                                                                            gAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCtt                                                                <  1:289358/143‑1 (MQ=255)
                                                                            gAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGAAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAACATCGCTATGCGCCGCTGGCAGCGCGTtcttgt                                                                >  2:599819/1‑140 (MQ=21)
                                                                             aaCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTc                                                               <  1:1036429/143‑1 (MQ=255)
                                                                              aCGCCTTATCCGGCCTACAGAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCa                                                              <  2:557611/143‑1 (MQ=255)
                                                                              aCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTGTATTcg                                                              >  1:35102/1‑142 (MQ=255)
                                                                               cGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCaa                                                             <  1:461974/143‑1 (MQ=255)
                                                                               cGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCaa                                                             <  2:76789/143‑1 (MQ=255)
                                                                               cGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATGAAAGACCGATATTCGCCGCTTTCAGGGCGTTCTCTTCaa                                                             >  2:528656/1‑143 (MQ=255)
                                                                                gCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCact                                                            >  1:821782/1‑141 (MQ=255)
                                                                                  cTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa                                                                                                                                            >  1:290704/1‑62 (MQ=255)
                                                                                   ttATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATaaa                                                         <  1:832542/143‑1 (MQ=255)
                                                                                   ttATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCCTTCAGGGCGTTACTCTCAATaaa                                                         >  2:1062158/1‑143 (MQ=255)
                                                                                     aTCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACg                                                       >  2:666158/1‑143 (MQ=255)
                                                                                      tCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTGTTCAATAAAGGc                                                      >  1:314882/1‑143 (MQ=255)
                                                                                       ccGGCCTACAAAATCATGAAAATTCAATACATTGCACGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCCATACACGcc                                                     >  2:514956/1‑142 (MQ=255)
                                                                                        cGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCAc                                                    >  1:507323/1‑143 (MQ=255)
                                                                                         ggCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCCCg                                                   >  2:921591/1‑143 (MQ=255)
                                                                                          gCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCCCTTTCACGGCGTTCTATGCACTAAACGCACgg                                                  >  1:6849/1‑143 (MQ=37)
                                                                                             tACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGgcgc                                               >  1:212781/1‑143 (MQ=255)
                                                                                             tACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGgcgc                                               >  2:147279/1‑143 (MQ=255)
                                                                                                aaaaTCACGAAAATTCAATACAATGCAAGATTTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTGCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGt                                            <  1:378663/143‑1 (MQ=255)
                                                                                                 gaaTCATGAAAATTCAATACATTGCAAGATTTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGtt                                           <  2:168212/142‑1 (MQ=255)
                                                                                                     cATGAATATTCAATACATTGCAAGATTTTCGTAGGCTTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAAc                                       <  2:404908/143‑1 (MQ=255)
                                                                                                     cATGAAAATGCAATACAGTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAAc                                       <  1:1002185/143‑1 (MQ=255)
                                                                                                      aTGAAAGTGCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACg                                      <  1:718240/143‑1 (MQ=255)
                                                                                                        gAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGc                                    >  2:1089030/1‑143 (MQ=255)
                                                                                                         aaaaTTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTCGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCg                                   >  1:1152860/1‑143 (MQ=255)
                                                                                                           aaTTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGCTGTTCGCCACACTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTc                                 >  1:874877/1‑143 (MQ=38)
                                                                                                             ttCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAACCGCACGGCGCGGTTCAACGGCGTGGc                               >  2:376505/1‑143 (MQ=255)
                                                                                                                aaTACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGAGATTCGCCGCTTTCAGGGCGTTGTCTTCGATTGACTGAGGGCGCGGTTCAACGGCGTCGCCCa                            >  1:607167/1‑143 (MQ=38)
                                                                                                                aaTACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGAGATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCa                            <  1:795850/143‑1 (MQ=255)
                                                                                                                  tACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATc                          >  1:1106832/1‑143 (MQ=255)
                                                                                                                  tACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATc                          <  1:765448/143‑1 (MQ=255)
                                                                                                                  tACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATc                          <  1:394671/143‑1 (MQ=255)
                                                                                                                  tACATGGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATc                          <  1:116073/143‑1 (MQ=255)
                                                                                                                        gCAAGATTTTCGTAGGCCTGATAGGCGTAGCGCATCAGGCACGCTCGAATGGTGAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtg                    <  2:1040283/143‑1 (MQ=255)
                                                                                                                         catgATTGTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtgg                   <  2:1138401/140‑1 (MQ=255)
                                                                                                                          acgcttctCGTTGGCCTGATAGGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGAGATTCGCCGCTTTCAGGGCGTTCTCTTCAATACACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggt                  <  2:127982/136‑1 (MQ=255)
                                                                                                                          aaGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggt                  <  1:637001/143‑1 (MQ=255)
                                                                                                                             aTTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaa               <  2:295288/143‑1 (MQ=255)
                                                                                                                                ttCGTAGGCCTGATGAGAGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGTCGTCGCCCATCAGCGTGGTGaacaa            <  2:568283/143‑1 (MQ=255)
                                                                                                                                 tCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaacaac           <  1:161009/143‑1 (MQ=255)
                                                                                                                                   gTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTg         <  2:547435/143‑1 (MQ=255)
                                                                                                                                    tAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTgg        >  1:791190/1‑143 (MQ=255)
                                                                                                                                     aGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGt       <  1:38908/143‑1 (MQ=255)
                                                                                                                                      ggCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTc      <  1:828279/143‑1 (MQ=255)
                                                                                                                                      agCCTGATAAGCGTAGCGCGTCGGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTc      <  2:1010381/142‑1 (MQ=255)
                                                                                                                                          tGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTGGCTGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGGCGgca  >  1:1009331/1‑143 (MQ=255)
                                                                                                                                          tGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGgca  <  2:995807/143‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                            
AATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCA  >  NC_000913/3877524‑3877804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.