Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,526,449 IS5 (+) +4 bp intergenic (‑300/‑17) nudE ← / → yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)66 (0.990) 53/284 0.2 98.5% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3526449 = 1 (0.020)intergenic (‑300/‑20) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein
* ? NC_000913 = 2290113NA (NA)68 (1.030) 58/282 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3526452 0 (0.000)intergenic (‑303/‑17) nudE/yrfF adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase/putative RcsCDB‑response attenuator, inner membrane protein

Only 100 of 143 total aligned reads displayed.

TGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526307‑3526591
                                                                                                                                              |                                                                                                                                              
tGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCACGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGAc                                                                                                                                                >  1:7972/1‑143 (MQ=255)
tGATAGTCCGCCGTCAGACGGTTTGCTATGATCAGCGGTTACTGCAATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTCGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGAc                                                                                                                                                <  1:1046313/143‑1 (MQ=255)
   tatTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGGTACTGTGATGTGCTTAATAATGCTCAAGTTAGACTGCACGCTTGCCGATAGCCCACCGCAGAATCATGTATTGTGTCCGGCGCGACTGACCACGCCTCCCAGACtaa                                                                                                                                             >  1:6101/1‑143 (MQ=255)
     ttCCGCTTGCAGAGTATCTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCCCAAGTTAAACTCCACGCTCGCCGATAGCCAACCGCATAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAgg                                                                                                                                           >  2:892796‑M2/1‑141 (MQ=255)
       ccGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACtcagcac                                                                                                                                         >  2:683095/1‑140 (MQ=255)
       ccGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGCGCAACCGACCGCGCCTGACAGACTAAggaa                                                                                                                                         <  2:1100489‑M2/143‑5 (MQ=255)
          gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacataaagaaatgaaatgactgagtcagccgagaagaatttccccgcatattcgcaccatccCTGAGAAAgaa                                                                                                                                      >  2:562102‑M2/133‑142 (MQ=255)
          ccTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggt                                                                                                                                      >  1:991100‑M2/1‑136 (MQ=255)
            cgtaaatggcgaagaaacggtctaaagaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATgg                                                                                                                                    <  1:58907‑M2/13‑1 (MQ=255)
                  gggTTTGCTATGATCAGCGGTTCCTGTGATGTGCTTAATGATGCTCAAGTTAACCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaa                                                                                                                              >  2:922870‑M2/1‑128 (MQ=255)
                     tttGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACAACGCCTGACAGACTAAgggaggtgcgtacaagta                                                                                                                           <  1:319245‑M2/143‑19 (MQ=255)
                      gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATg                                                                                                                          >  1:501619‑M2/121‑143 (MQ=255)
                       aagaaacggtctaaataggctgattcaaggcatttacgggagaaaaactagcgttagatgggaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGa                                                                                                                         <  1:274166‑M2/24‑1 (MQ=255)
                        gCTATGATCAGCGGTTTCTGTGATGTGCTTAATTATTCTCAAGTTAAACTCCACGCTCGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCCCGCCTGACAGACTAAggaaggtgcgaacaagtccct                                                                                                                        >  2:361716‑M2/1‑122 (MQ=255)
                            tGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCACATTGGTAACGGAAGAATCATGTATTGTGTCCGGTGCGACTCACCACGCCTTACAGACTAAggaaggcgcgaacaagcccctgata                                                                                                                    <  2:1171617‑M2/143‑26 (MQ=255)
                               tCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                 <  1:10559‑M2/143‑29 (MQ=255)
                                tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATtg                                                                                                                <  2:461330‑M2/33‑1 (MQ=255)
                                 ctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATtgt                                                                                                               <  2:124921‑M2/34‑1 (MQ=255)
                                      ttACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatg                                                                                                          <  2:510450‑M2/143‑36 (MQ=255)
                                          tgtgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                      <  1:1022664‑M2/143‑40 (MQ=255)
                                          ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGAttttttt                                                                                                      <  1:121354‑M2/43‑1 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgtctgagtcagccgagaagaatatccccgcgtattcgcgccttccCGAAGTAAGATGGGGAAAGCATGAGCACCATTGTGattttgttc                                                                                                     >  1:165096‑M2/100‑142 (MQ=255)
                                           tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAGGATGGGGAAAGCATGAGCACCATTGTGAGTTTTTTa                                                                                                     >  1:365241‑M2/100‑143 (MQ=255)
                                            tgATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                                                                    <  1:147251‑M2/143‑42 (MQ=255)
                                             gATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                   >  1:1100489‑M2/1‑101 (MQ=255)
                                             attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagacagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAgc                                                                                                   >  1:756487‑M2/98‑143 (MQ=255)
                                              ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcgTTTTGCAAAACCGAGAAAGAATGAGCACCATTGTGATTTTTTTAgct                                                                                                  >  1:1188022‑M2/97‑143 (MQ=255)
                                                gtgCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatacgagatcatgtttgtcatct                                                                                                <  2:1067035‑M2/143‑46 (MQ=255)
                                                 tgCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctcatatgcgatcatgtttctcatctg                                                                                               <  1:503338‑M2/143‑47 (MQ=255)
                                                 aaggcatttacgggagaaaaaatcggctcaaacatgaaggaatgaaatgactgagtcagccgagaagaattttcccgcttattcgcaccttccCTAAGTAAGAGGGGGAAAGCAGGAGGAGCGTCGTGAGTTGTTtagctggt                                                                                               >  1:300704‑M2/94‑141 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCCACATCGTGATTTTTTTAGCTGCtt                                                                                              >  2:582221‑M2/93‑143 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCtt                                                                                              >  1:412148‑M2/93‑143 (MQ=255)
                                                   ggcagttacgggagaagaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCttt                                                                                             <  1:56683‑M2/52‑1 (MQ=255)
                                                    ttAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACGGGGGGTTCAGTTACTCTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                            >  1:552600‑M2/1‑94 (MQ=255)
                                                     tAATGAGGCTCAAGTTAAACTCCACGCGTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc                                                                                           >  1:975319‑M2/1‑93 (MQ=255)
                                                      aaGGATGGTCAAGGTAAGCTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc                                                                                          >  1:408382‑M2/1‑92 (MQ=255)
                                                         gatgCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgtacacgtccctgatctgccatcatgtctgtcatctggagcaata                                                                                       <  1:897619‑M2/143‑55 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGAACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTg                                                                                    >  2:661265‑M2/83‑143 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGCGCAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTCGCCTg                                                                                    >  1:577914‑M2/83‑143 (MQ=255)
                                                            gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacctaccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTg                                                                                    <  2:391781‑M2/61‑1 (MQ=255)
                                                            gCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTACggaaggtgcgaacaagtccctgatatgagatcatgtttgtcgtgtggagccatagaa                                                                                    <  2:717991‑M2/143‑58 (MQ=255)
                                                            gCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctagagccatagaa                                                                                    <  2:199238‑M2/143‑58 (MQ=255)
                                                             ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagacgagaagaatttccccgctgattcgcaccttccCTAAGTAAGACGGGGAAAGCATGAGCACCACTCTGATGTTCTTCGCGGCTTTGCTGGcctcc                                                                                   >  2:764750‑M2/82‑141 (MQ=255)
                                                             cTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCAAGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaggtccctgatatcagatcaagtttggtatctggggccatagcgg                                                                                   <  2:1022899‑M2/143‑59 (MQ=255)
                                                              gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCCCCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCt                                                                                  >  1:838690‑M2/81‑143 (MQ=255)
                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCa                                                                                >  2:503710‑M2/79‑143 (MQ=255)
                                                                   ttAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                             <  1:972555‑M2/143‑65 (MQ=255)
                                                                        cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGc                                                                        <  1:905732‑M2/73‑1 (MQ=255)
                                                                         ggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCg                                                                       <  1:385599‑M2/74‑1 (MQ=255)
                                                                           ctcgtTTGCCGAGAGCCCACCGCAGAACCATGTATTGTGGCCGGTGCGACTGACCACGCCTGACAGACTAAtgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                     >  2:95764‑M2/3‑71 (MQ=255)
                                                                           ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTACGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTAATTGCggg                                                                     >  1:474343‑M2/68‑143 (MQ=255)
                                                                           cAGGCTTGCCGACAGCCAACCGCAGTATCATGTATTGTGTCCGGTACGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                     >  2:265210‑M2/1‑71 (MQ=255)
                                                                           cACGCTTGCCGATGGCCAACCGCAGAACCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                     >  2:892594‑M2/1‑71 (MQ=255)
                                                                           cACGCTTGCCGATAGCCAACCGCAGAAGCATGTATTGTGTCCGGTGCGACTGACCACGCCTGAGAGACTAAggaaggtgcgaacaaggccctgatgtgagagcatgtttgtcatctggagccatagaacagggttcatcatga                                                                     <  1:258286‑M2/143‑73 (MQ=255)
                                                                            aCGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag                                                                    >  1:64158‑M2/1‑70 (MQ=255)
                                                                              gCTGGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                  >  1:86623‑M2/1‑68 (MQ=255)
                                                                               aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTCAGATGGGGAAAGCATGAGCACCCTTGTGATTTTTTTAGCTGCTTTTCTGGCCTGCTCAATACTTGCGGGATgg                                                                 >  2:1142646‑M2/64‑143 (MQ=255)
                                                                                acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGc                                                                >  1:951768‑M2/63‑143 (MQ=255)
                                                                                    cGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTCAggaaggtgcgaacaagtccctgatatgagatcatgtttgacgtctggagccatagaacagggttcctcatggagcatcaac                                                            <  2:206254‑M2/143‑82 (MQ=255)
                                                                                        aGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac                                                        >  1:896155‑M2/1‑58 (MQ=255)
                                                                                              aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGa                                                  <  1:1090303‑M2/95‑1 (MQ=255)
                                                                                                 cAGAATCATGTATGGTGTCAGGGGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                               >  2:230561‑M2/1‑49 (MQ=255)
                                                                                                  actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCa                                              <  1:49252‑M2/99‑1 (MQ=255)
                                                                                                   gAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgccccgggttcatcatgagtcatcaacttaccttcgccgaca                                             >  1:510450‑M2/1‑47 (MQ=255)
                                                                                                   gAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                             >  1:263150‑M2/1‑47 (MQ=255)
                                                                                                   ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAg                                             >  1:567975‑M2/44‑143 (MQ=255)
                                                                                                    tgaggcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGa                                            <  1:455981‑M2/101‑1 (MQ=255)
                                                                                                     gcgtcagccgagaagaatctccccgcttattcgccccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTTCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGAc                                           <  2:1032018‑M2/102‑1 (MQ=255)
                                                                                                        acgtaTTGTGTCCGGTGCGACTGACCAGGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                        >  1:991087‑M2/3‑42 (MQ=255)
                                                                                                        aTGTATTGGGTCCGGTGCGACTGACCACGGCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                        >  1:1010945‑M2/1‑42 (MQ=255)
                                                                                                         tGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat                                       >  1:1150762‑M2/1‑41 (MQ=255)
                                                                                                          gTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                      >  2:147251‑M2/1‑40 (MQ=255)
                                                                                                          gTATTGTGGCTGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                      <  2:27650‑M2/143‑104 (MQ=255)
                                                                                                            ccgagaagaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCa                                    >  1:841088‑M2/35‑143 (MQ=255)
                                                                                                              tgtgTCCGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaactcagc                                  <  1:850311‑M2/143‑108 (MQ=255)
                                                                                                               gtgtCCGGGGCGACTGACCACGCCTGACAGACTAAggtgggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaatttaccttcgccgacagtgaattcagca                                 >  2:259793‑M2/1‑35 (MQ=255)
                                                                                                                  agaatgtccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGcc                              <  1:480809‑M2/115‑1 (MQ=255)
                                                                                                                   gaatttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTCCTTGCGGGATGGCTGATAAAAGTGCGCTCCAGACGGCGTCCGCTgcct                             >  2:915088‑M2/28‑142 (MQ=255)
                                                                                                                   ccGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                             <  2:438424‑M2/143‑113 (MQ=255)
                                                                                                                    cGGTGCGACTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcagcgtgctgtgggcgacggtgaatgcagcaggaag                            <  1:243567‑M2/143‑114 (MQ=255)
                                                                                                                     attgccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTg                           <  2:827728‑M2/118‑1 (MQ=255)
                                                                                                                       ttccccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGa                         <  2:787289‑M2/120‑1 (MQ=255)
                                                                                                                        tcccaggttattcgcagcttccCTAGGTAAGATGGGGAAAGCATGAGCACCAGTGTGATTTTTTTAGCTGCTTTGCGGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGAc                        <  1:1117558‑M2/121‑1 (MQ=255)
                                                                                                                           ccgcttattcgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCTGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCaa                     <  1:1142646‑M2/124‑1 (MQ=255)
                                                                                                                           aCTGACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaccgtgaattcagcagtaagcgccgtc                     <  2:805543‑M2/143‑121 (MQ=255)
                                                                                                                            tgcttattagcaccttcgCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACGTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAAc                    <  2:865777‑M2/125‑1 (MQ=255)
                                                                                                                              gACCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                  >  1:457686‑M2/1‑20 (MQ=255)
                                                                                                                               aCCACGCCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                   >  2:482025‑M2/1‑19 (MQ=255)
                                                                                                                                tattcgcaccttccCTTAGTAAGATGGTGAAAGCATGAGCACCATTGTGCTTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCt                <  2:648853‑M2/129‑1 (MQ=255)
                                                                                                                                 cccgcCTGACAGACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacca               >  2:823904‑M2/3‑17 (MQ=255)
                                                                                                                                  ttcgcactttccATAAGTAAGAATGGGAAAGCATGAGCATCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGACCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTc              <  1:719617‑M2/131‑1 (MQ=255)
                                                                                                                                    cgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCCCTCCTTGCGGGATGCCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGCCCCACCGCCTTcgc            >  2:319589‑M2/11‑143 (MQ=255)
                                                                                                                                    cgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgc            <  1:740155‑M2/133‑1 (MQ=255)
                                                                                                                                    cgcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgc            >  2:1136155‑M2/11‑143 (MQ=255)
                                                                                                                                     gcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgcg           >  1:933732‑M2/10‑143 (MQ=255)
                                                                                                                                     gcaccttccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTcgcg           >  1:671124‑M2/10‑143 (MQ=255)
                                                                                                                                     ccTGACAGACTAAggaaggtgcaaacaagtcactgatatgatatcgtgttagtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa           <  2:982356‑M2/143‑131 (MQ=255)
                                                                                                                                      cgggcagagTAAggaaggtgggaacatgtctctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa          >  2:1004853‑M2/5‑12 (MQ=255)
                                                                                                                                      cTGACATACTAAggaaggtgcgaaccagtctccgatatgagatcatgtttgtcatctggagccatagaacagggctcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa          >  1:804622‑M2/1‑12 (MQ=255)
                                                                                                                                          tgccCTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATgc      <  1:408352‑M2/139‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
TGATATTCCGCCTTCAGAGGGTTTGCTATGATCAGCGGTTACTGTGATGTGCTTAATGATGCTCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCCGGTGCGACTGACCACGCCTGACAGACTAAGTAAGATGGGGAAAGCATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAA  >  NC_000913/3526307‑3526591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.