Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908 258683 776 71 [0] [0] 71 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)66 (1.050) 51/268 0.2 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers

CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTG  >  NC_000913/258544‑258824
                                                                                                                                            |                                                                                                                                            
ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                            >  2:245540‑M2/141‑143 (MQ=255)
ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatagtcgtgaaggtaAGt                                                                                                                                            >  1:1062332‑M2/141‑143 (MQ=255)
taccaaattggcaaaatttagcaaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaatagcagattgatcaaaaaatttaccgcactaggcccgtagattcgtgaaagtaagt                                                                                                                                            >  2:67854‑M2/141‑143 (MQ=255)
 taaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttacggagtggacacccgaagagcagcttgatcaaaaaatttaccgcactaggcccgtagagtcgtgaaggtaAGTg                                                                                                                                           >  2:271532‑M2/140‑143 (MQ=255)
    aacttggctacactttgccaatttggtaatacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaacaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCaa                                                                                                                                        <  2:486818‑M2/7‑1 (MQ=255)
     catctgctatattttcccaattttgtataccagttgcatcacaacaggagatagcaatgacgttaccgtgtggccacccgaagagcagattgttcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCaaa                                                                                                                                       <  2:121102‑M2/8‑1 (MQ=255)
         tgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATa                                                                                                                                   >  1:586045‑M2/132‑143 (MQ=255)
            taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacccctgaagagcagagtgataaaacaatacacgtcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                >  1:1138688‑M2/129‑143 (MQ=255)
            taaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                >  1:834067‑M2/129‑143 (MQ=255)
            taaatcttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                <  1:23812‑M2/15‑1 (MQ=255)
              aattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccggagagcagaatgatcaaaaaatttaccgcactaggcgcgtatattcgtgaaggtaAGTGAAAAGATACTCGa                                                                                                                              >  2:775816‑M2/127‑143 (MQ=255)
              aattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGa                                                                                                                              >  2:286468‑M2/127‑143 (MQ=255)
                     ccaatttggtaaaacagttgcatcacaacaggttatatcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATGATCGATTCtttt                                                                                                                       >  1:1204728‑M2/120‑143 (MQ=255)
                     ccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtagattcgtgaaggtaAGTGAAAAGATCATCGATTctttg                                                                                                                       >  1:544346‑M2/120‑142 (MQ=255)
                        agttggtaagacaggtgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCg                                                                                                                    <  2:813310‑M2/27‑1 (MQ=255)
                             gtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaacaattacactcattaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCAATtgg                                                                                                               >  1:1194949‑M2/112‑142 (MQ=255)
                              taaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatgaaaaaatttaccgcactaggcccgcatattcgggaagaaaAGTGCAAAGATAAGCGCTCCTTTGTCGATGgtt                                                                                                              >  2:787738‑M2/111‑142 (MQ=255)
                                 aacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTgg                                                                                                           <  2:370621‑M2/36‑1 (MQ=255)
                                  acagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactgggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGc                                                                                                          >  2:591667‑M2/107‑143 (MQ=255)
                                   cagtggcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCt                                                                                                         <  1:959453‑M2/38‑1 (MQ=255)
                                      ttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTa                                                                                                      >  2:227359‑M2/103‑143 (MQ=255)
                                         catcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc                                                                                                   >  1:641633‑M2/100‑143 (MQ=255)
                                         catcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAACGGATTCTTTTTCGCTTGCCTGGCtgtaggg                                                                                                   >  1:81609‑M2/100‑140 (MQ=255)
                                             acaacaggagatagcaatggcggtaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCa                                                                                               <  1:265967‑M2/48‑1 (MQ=255)
                                                acagtagatagcaatgacgttaccgagtgggcacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACg                                                                                            <  2:1130562‑M2/51‑1 (MQ=255)
                                                   ggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGa                                                                                         <  1:539079‑M2/54‑1 (MQ=255)
                                                    gagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgcagattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGaa                                                                                        >  2:905043‑M2/89‑143 (MQ=255)
                                                         agcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCgg                                                                                   <  1:282229‑M2/60‑1 (MQ=255)
                                                               gacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCgg                                                                             <  2:834067‑M2/66‑1 (MQ=255)
                                                                  gttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTGAACGTGAAACCGGCACCGGAAg                                                                          >  2:571841‑M2/75‑143 (MQ=255)
                                                                   ttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGt                                                                         <  2:55413‑M2/70‑1 (MQ=255)
                                                                       cgagtggacacccgaagaccagattgatcaaagaatttaccgcgctaggcgcgtatattcgtgaaggtaAGTGGAAAGATAATCGATTCTTTTGCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                                                                     <  2:1137971‑M2/74‑1 (MQ=255)
                                                                               cacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTg                                                             <  1:227359‑M2/82‑1 (MQ=255)
                                                                                acccgaagcgcagatggatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgg                                                            <  1:1159766‑M2/83‑1 (MQ=255)
                                                                                acccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgg                                                            <  1:591667‑M2/83‑1 (MQ=255)
                                                                                  ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                          >  1:1196997‑M2/59‑143 (MQ=255)
                                                                                  ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                          >  2:159528‑M2/59‑143 (MQ=255)
                                                                                   cgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGc                                                         >  1:1157215‑M2/58‑143 (MQ=255)
                                                                                   cgaagagcagattgatcaaaaaatttaccgcactaggcccgcatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGCGAATTCTGGGGc                                                         >  2:936995‑M2/58‑143 (MQ=255)
                                                                                    gaagagcagattgatcaaaaaatgtaccgcactaagcccgtatattcgtgaaggtaAGTGCAAAGATAATCAGTCGTGTTGCGTGTGTCTGGCTCTCTGCGTCAACGTGAAACCGGCACCGTCAGTGCGTGAATTCTGGGGCt                                                        >  2:975254‑M2/57‑143 (MQ=255)
                                                                                       gagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgatggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggt                                                     <  2:1194242‑M2/90‑1 (MQ=255)
                                                                                            gatttatcaaaaaatttcccggactaggcccgtatattcgcgaaggtaAGTGCAAAGACAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                                <  1:79349‑M2/95‑1 (MQ=255)
                                                                                            gattggtcaaaaaatgtaccgcactaggcccgtatagtcgtgaaggtgTGTGCTAACATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatg                                                <  1:273044‑M2/95‑1 (MQ=255)
                                                                                                 atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCt                                           <  1:228046‑M2/100‑1 (MQ=255)
                                                                                                  tcaaaaaatttacagaaatagttccgtttattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTg                                          <  2:387424‑M2/101‑1 (MQ=255)
                                                                                                    aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGa                                        >  1:576759‑M2/41‑143 (MQ=255)
                                                                                                     agatgtttaccggactaggtgcgtatattcgtgaaggtaAGTGCAAAGATACTCGATTCTTTTGCGATTGTCTGGGTGTATGCGTCAACGTGGAGCCGGGACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaa                                       <  2:931978‑M2/104‑1 (MQ=255)
                                                                                                     aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGGATTCGGGGGCTGGTGGGTGGAGCTGgag                                       >  1:116982‑M2/40‑142 (MQ=255)
                                                                                                     aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaa                                       >  1:973947‑M2/40‑143 (MQ=255)
                                                                                                     aaaaatttaccgcactaggcccgcatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaa                                       <  1:231267‑M2/104‑1 (MQ=255)
                                                                                                     aaaaagttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaa                                       <  1:556094‑M2/104‑1 (MQ=255)
                                                                                                        aatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGACTCTTTTTCGATTGTGTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATACTGGGGCTGGTGGATGGAGCTGGAGgcg                                    >  2:376239‑M2/37‑143 (MQ=255)
                                                                                                          tttaccgcactaggcccgtatattcttgaagctaAGTGCAAAGATAATCGATTCTTTTTCGCTTGTCCGCCTGTATGCGTCAACGTGAAACCGGCACCGGACGTGCGCGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                  >  1:258019‑M2/35‑143 (MQ=255)
                                                                                                           ttaccgcactcggcccgtatattcgtgaacataAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAg                                 <  2:1100645‑M2/110‑1 (MQ=255)
                                                                                                             tccgctctaggcttgtatattcgtgaaggtaAGTGCAAAGGTAGACGATTCAGCGTCGACTGTCCGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGa                               <  1:45353‑M2/112‑1 (MQ=255)
                                                                                                             accgcactaggcccgtatgttcgtgaaggtaAGTGCAAAGATAATCGATTGTTTTTCGATTGTCTGGCTGGATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGa                               <  1:44290‑M2/112‑1 (MQ=255)
                                                                                                              ccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTATAAGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCCGGAAGCGCCGGaa                              >  2:1109325‑M2/31‑143 (MQ=255)
                                                                                                                     aggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGtt                       <  1:571841‑M2/120‑1 (MQ=255)
                                                                                                                      ggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGGAGGAATCCCGttt                      >  2:676899‑M2/23‑143 (MQ=255)
                                                                                                                      ggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGttt                      <  2:696145‑M2/121‑1 (MQ=255)
                                                                                                                        cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTCGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTCTTa                    >  2:742425‑M2/21‑143 (MQ=255)
                                                                                                                              tattcgtgagagtaAGTGCAAAGATAACCGAGTCTTGTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACa              <  1:57043‑M2/129‑1 (MQ=255)
                                                                                                                                 tcgtcaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCCGGGGCTGGTGGATGGAGCTGGGAGCGCAGGAATCCCCTtttacctcaaagt           >  2:1123442‑M2/12‑137 (MQ=255)
                                                                                                                                   gtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGCCACAGGGATCGTAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGCAGCGCAGGAATACCGTTTTACATACAGTtaa         >  1:755622‑M2/10‑142 (MQ=255)
                                                                                                                                   gtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGGCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTAc         <  2:586045‑M2/134‑1 (MQ=255)
                                                                                                                                   gtgaaggcaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGGATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTAc         <  2:286687‑M2/134‑1 (MQ=255)
                                                                                                                                     gtaagtaAGTGCAAAGATAATCGACTCTTGTTTGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCa       <  1:315124‑M2/136‑1 (MQ=255)
                                                                                                                                      aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCAGGCTGTATGCAACAACGTGAAACCGGCACCGGAAGTGCGGGAATTCTGGGGCTGGTGGATGGAGGTGGAAGCGGAGGGATGCCGTTTGACCtccagttggcag      >  2:1173457‑M2/7‑138 (MQ=255)
                                                                                                                                          taAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg  <  2:973947‑M2/141‑1 (MQ=255)
                                                                                                                                          taAGTGCAAAGATAATCGATGCTTTTTCGAGTGGCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg  <  1:967693‑M2/141‑1 (MQ=255)
                                                                                                                                          gaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg  <  1:264456‑M2/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTG  >  NC_000913/258544‑258824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: