New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2791004 =	55 (1.060)	5 (0.100)	5/270	6.6	8.5%	coding (1023/1269 nt)	lhgO	L‑2‑hydroxyglutarate oxidase
	?	NC_000913	2791022 =	55 (1.110)					coding (1041/1269 nt)	lhgO	L‑2‑hydroxyglutarate oxidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTCGGGGATTCGCCGGGTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTAT  >  NC_000913/2790866‑2791135                                                                                                                                           |                                                                                                                                    gtcgGGGATTCGCCGGGTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTAAGTAAAGCGAACTACAGACCTGGaccc                                                                                                                                 >  2:103707/1‑142 (MQ=255)  tcgGGGATTCGCCGGGTGCTGCAAAACCATCGACGCTCAGGACTGGGCGAGATGAAACACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCccgc                                                                                                                                <  1:801042/143‑1 (MQ=255)  tcgGGGATTCGCCGGGTGCTACAAAAACATCTACGCTCAAGACTGGGCGAGATGAAAAAATCGCTGTGCAAAAGAAGCTATCTGCGGCTGATGCAAAAGTATTGTACCCGGATTTCGTTAAGCAAACACCAGACCTTGCctgc                                                                                                                                >  2:320254/1‑143 (MQ=255)    ggagATTCGACGGGTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCccgccg                                                                                                                              <  1:431143/140‑1 (MQ=255)                 gTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTCTCTGCGGCTGGTGCCAAAGTATTGTCCACGGCTTTCGTTAAGCGATCTCCAGCCCTGGCACGCCGGAGTGCGCGCGCa                                                                                                                 >  1:164836/1‑143 (MQ=255)                 gTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCa                                                                                                                 <  1:549269/143‑1 (MQ=255)                     tgcAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAGAAGTATTGTCCCCGGCTGCAGTTATGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCg                                                                                                             >  1:652364/1‑143 (MQ=255)                     tgcAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCTCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCg                                                                                                             >  1:941599/1‑143 (MQ=255)                      gcgagaCCATCTGCGCTCAGGGCTGGGCGTGATGAAAAACGCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCgg                                                                                                            <  2:562379/138‑1 (MQ=255)                      gcAAAACCATCTACGCTCAGGCCTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCgg                                                                                                            <  2:139967/143‑1 (MQ=255)                       gacacccATCTACGTTCGGGACTGGGCGAGATGAAAAACGCGCGGTGCAAAAGGGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTGTCGTTAAGCGATGTCAACCCGTGTGGCTCGGGTGTGCGGGCGCAGGCGGt                                                                                                           <  2:117485/138‑1 (MQ=255)                       cAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGc                                                                                                                        <  2:616533/130‑1 (MQ=255)                       cAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGc                                                                                                                        >  1:616533/1‑130 (MQ=255)                         aaaCCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTAt                                                                                                         >  1:749143/1‑143 (MQ=255)                                 tACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGAc                                                                                                 <  1:404296/143‑1 (MQ=255)                                     cTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCa                                                                                             >  2:339981/1‑143 (MQ=255)                                            cTGTGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGAt                                                                                      <  1:528296/143‑1 (MQ=255)                                              gggCGAGATGTAAAACTCGCTGTGCAATAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTGAAGCGCTGTCCAGCGCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGAttc                                                                                    <  2:587310/143‑2 (MQ=255)                                               tgCGTGATGGAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCTGCTTTCGTTCAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGa                                                                                   <  2:728772/142‑1 (MQ=255)                                               tgCGAGATGAGGACCTCGCTGGGCAAAGGCGGGTGTCTGCGGCTGGTGCAGAAGGATTGGCCCCGGCCTGCGTTACGCGCTCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGa                                                                                   <  1:198779/142‑1 (MQ=255)                                               ggCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGa                                                                                   <  1:402490/143‑1 (MQ=255)                                               ggCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGa                                                                                   <  2:749143/143‑1 (MQ=255)                                                 cGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACg                                                                                 <  2:124949/143‑1 (MQ=255)                                                    gagcaaaaaCTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGAtt                                                                              <  1:169250/139‑1 (MQ=255)                                                       gAAAACCTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTc                                                                           <  1:296908/143‑1 (MQ=255)                                                       gAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTACGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCGGATGGACGATTTTc                                                                           >  2:331357/1‑143 (MQ=255)                                                       gAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCCGGCGGTATCGCCGGACGGCCGGCTGCGTGACGGTTTTc                                                                           >  2:438179/1‑143 (MQ=255)                                                        aaaatCTCGCGGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGAATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCt                                                                          <  1:770865/143‑1 (MQ=255)                                                         aaaaCTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCGGGCGGTATCGCCGGACGGCAAGCTGGTTGACGATGTTCTg                                                                         >  1:575346/1‑143 (MQ=255)                                                         aaaaCGCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTg                                                                         <  1:921848/143‑1 (MQ=255)                                                                gCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATCGTACCAGGCTTGCTTTGCGCGATCTCCGGCTCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTca                                                                  <  1:178322/143‑1 (MQ=255)                                                                    tgCAAATGCGGCTGTCTGGGGCTGGTGCAAAAGTATTGTCCCCGTCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTcaccac                                                              <  2:565745/143‑1 (MQ=255)                                                                    tgCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTcaccac                                                              <  1:429953/143‑1 (MQ=255)                                                                      cAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGAAGCTTTTCTGTTTGTAAcccccc                                                            >  2:54382/1‑143 (MQ=255)                                                                       aaaaGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCGCCAcccc                                                           >  1:142357/1‑143 (MQ=255)                                                                       aaaaGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCAcccc                                                           <  1:339981/143‑1 (MQ=255)                                                                                   cTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGCTCca                                               >  2:844322/1‑143 (MQ=255)                                                                                    tGCGGCTGGTGCAAAAGTATCGTCCCGCGCTTTGTTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCGGGCTGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCcac                                              <  2:151723/143‑1 (MQ=255)                                                                                    ggCGGCTGGGGCAAAAGTGTTGGCCCCGGGTTTCGTTAAGCGACCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCcac                                              <  2:546115/142‑1 (MQ=255)                                                                                             tGCAACAGTATTCCCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAAt                                     <  1:377444/143‑1 (MQ=255)                                                                                             tGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAAt                                     >  2:262891/1‑143 (MQ=255)                                                                                             tGCAAAAGTATTGTCCCCGGCTGTCGTTAAGCGAGCTCCAGCCCTGGACGGACTCATTCCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAAt                                     <  1:947993/143‑1 (MQ=255)                                                                                               cAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCCCGACCCCCACCTGCAATgc                                   >  2:801668/1‑143 (MQ=255)                                                                                               cAAAAGCATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACAGCAAGCTGATTGACGATTTTATGTTTGTCACCACCCCGCGCACGATCCACACCTGCaagga                                   >  1:109819/1‑140 (MQ=255)                                                                                                 agaggaTTGGCCGCGTCTTGCGTTAGGCGATCTCCAGCCCGGGCGCGCCGGGGTGCGGGCGCTGGCGGTATCGCGGGGCGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGAGCCACACCTGCAATgcgc                                 <  2:189803/138‑1 (MQ=255)                                                                                                      aTTGTGCCCTGCTTTCGTTAAGCGTTCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGTGGTATCGCCTGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTcc                            <  2:462118/143‑1 (MQ=255)                                                                                                        tggccccGGCTTTCGTTCAGCTATCTCTATCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTcccc                          <  1:805215/140‑1 (MQ=255)                                                                                                        tGTCTCCGGTGTTCTTTAAGCTATCTGCTGTCCGGGCTCGTCTTGGTGTGGGCGCAGGCAGTATCGCCTGACGGCACGCTGATTGTCTATTTTTTGTTTGTTACGACCACGCGCGAGATCTACACCTGCAATGCGCCCTcccc                          <  2:864516/143‑1 (MQ=255)                                                                                                            cccGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCa                      >  1:732009/1‑143 (MQ=255)                                                                                                             ccGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAg                     >  2:138172/1‑143 (MQ=255)                                                                                                             ccGGCTTTCGTTAAGCGATCTCCAGCCCTGCCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGGTGGTTTCCCCACCGCCCCCACCCCGCGCACGATCCACACCCGCAATCCGCCCTCCCCGGCac                     >  1:217975/1‑142 (MQ=255)                                                                                                              cGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGc                    >  1:394964/1‑143 (MQ=255)                                                                                                                            cGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCCATGCCCCCTCCCCGGCAGCGACCTCAGCGATTc      >  1:617125/1‑143 (MQ=255)                                                                                                                               cctcgcgCCCCGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGCCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTa   <  2:913917/137‑1 (MQ=255)                                                                                                                                ctcCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGTCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTAt  <  1:103707/143‑1 (MQ=255)                                                                                                                                           |                                                                                                                                    GTCGGGGATTCGCCGGGTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTAT  >  NC_000913/2790866‑2791135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.