New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 4528522 = | 49 (0.940) | 4 (0.080) | 4/274 | 7.3 | 8.5% | coding (396/807 nt) | sgcQ | putative nucleoside triphosphatase |
? | NC_000913 | 4528542 = | 38 (0.750) | coding (376/807 nt) | sgcQ | putative nucleoside triphosphatase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CGATTGCCCAGATACACGGCGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGC > NC_000913/4528415‑4528680 | cgATTGCCCAGATACACGGCGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTaaa > 2:12133/1‑143 (MQ=255) tGCCCAGCTGCACCGCGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATAtc < 2:707784/143‑1 (MQ=255) ccagcgacacGGCGGCCTCTGGGCCGATCTCTAACAATGACTTCCCCGCGGCTGGGCGTATTCTGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTcg < 2:878328/137‑1 (MQ=255) cAGATACACGGTGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATACGCACCGGTAAATATCTcgc > 2:621618/1‑143 (MQ=255) gATACACGGCGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGGCCCAGACGCCAAAGTCGCTGGCGTAGGCACCGGTAAATATCTCGCgg > 1:248211/1‑143 (MQ=255) aTACACGGCGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCAGCGGTAAATATCTCGCGGa > 1:883258/1‑143 (MQ=255) cacGGCGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCCTAGGCACAGGTACAGATCCCGCGGACaa > 2:373160/1‑143 (MQ=255) acGGCGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGATGTTAGTGTCCCGGACGCCAAAGACCGCGCCATGGGCACCGGTAAATATCTCGCGGATaaa > 2:9179/1‑143 (MQ=255) cggcCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTa < 1:600510/143‑1 (MQ=255) ggcCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCACAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAg < 2:370584/143‑1 (MQ=255) ccTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAgcg < 1:742378/143‑1 (MQ=255) tGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAGACTTAGcggcgg > 2:99204/1‑143 (MQ=255) tGGGACGATATTGAACAAGGTTTTCACTTCGCCGGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCgg < 1:374345/143‑1 (MQ=255) ggACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGACTCACGGACGTTATTGTCCCAGACGCCAAAGTCGCTGGCCTAGGCCCCGGCAAATATCTCCCGGATAACCTTAGCGCCggca > 2:629637/1‑141 (MQ=255) gACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATTGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAg > 2:538047/1‑143 (MQ=255) gATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCa < 2:561029/143‑1 (MQ=255) gATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCa < 2:553078/143‑1 (MQ=255) atatTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCCCGCGGATAAACTTAGCGCCGGTAGCCAt > 1:802260/1‑143 (MQ=255) tatTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATc > 1:624907/1‑143 (MQ=255) tatTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCCCCGGTAGCCATc > 1:192766/1‑143 (MQ=255) tGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGcc < 2:492047/143‑1 (MQ=255) gAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCa < 1:351925/143‑1 (MQ=255) gAACAAGGTGTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCa < 2:433340/143‑1 (MQ=255) agggTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTc < 2:910821/141‑1 (MQ=255) tCACTTCGCCTGCACTATTCCGGTTTTTATGACGTATGGTCTCACCGACGTTAGTGGCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAg < 1:884380/143‑1 (MQ=255) tCGCCCGCAGCAACCCGGTGAGGACAACGGAGGGTCGCACCGACGTTAGTGTCCCAGACGCCAAAGTCCCTGGCATAGGCACCGGTAAATATCTCCCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGAc < 1:572026/143‑1 (MQ=255) gCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCAGATAAACTTAGCGCCGGTAGCCATCGCCAGGTGGAATGAAGCggacg > 2:211381/1‑139 (MQ=255) gCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGCTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAAGATCTCGCGGATACACTGAGCGCCGGTCGCGATAGCCAGCGCGAATGAGGCGGCCg > 2:596464/1‑143 (MQ=255) cTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGCAACTATCTCGCGGATAAACTTAGCGCCGGTAGCCATCTCCAGGCCGAATCAGGCGACCGGa > 2:287186/1‑143 (MQ=255) cACCAATCGGGTGTTGATGACGGATGGTGGAACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGTACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATcc < 2:540919/143‑1 (MQ=255) cAATCCCTTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAATTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCcac < 1:251136/143‑1 (MQ=255) ggTGTGGCTGACGGATGGTCTCACCGCCGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACa < 1:290334/143‑1 (MQ=255) gtgtTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACAt < 1:91443/143‑1 (MQ=255) ttAGTGTCCCAGACGCCAAAGGCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCt < 1:610344/143‑1 (MQ=255) cgtggCCCAGGCGCCGAAGTCGCTGGCATGGGCACCGGTAAATAGCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCa < 2:12819/142‑1 (MQ=255) gtgtCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCCTCGCCAGGTCGAATGACGCGCCCGGATCCCACAGAACATTCACGCCACACGGGATGCGGATATCGCTCAt > 1:488910/1‑143 (MQ=255) cAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGAGCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTg > 1:32890/1‑143 (MQ=255) atccAAAGACGCTGGTATAGGGACCGGTAAATATGCCGCGGATAAACTTAGCGCCGGTAGCCAGCGCCAGGGCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCg < 1:315530/141‑1 (MQ=255) cTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTCGCCATCGCCAGGTCGAATGAGGCGATCGGGACGCACAGTACGTTCGCGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGAttggcga > 2:717040/1‑138 (MQ=255) | CGATTGCCCAGATACACGGCGGCCTCTGGGACGATATTGAACAAGGTTTTCACTTCGCCTGCACCAATCCGGTGTTGATGACGGATGGTCTCACCGACGTTAGTGTCCCAGACGCCAAAGTCGCTGGCATAGGCACCGGTAAATATCTCGCGGATAAACTTAGCGCCGGTAGCCATCGCCAGGTCGAATGAGGCGACCGGATCCCACAGAACATTCACGCCAAACGGGATGCGGATATCGCTCATTAATTGCCCGATGATTCGTGC > NC_000913/4528415‑4528680 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |