New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =4 (0.100)33 (0.950) 27/252 0.3 89.7% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 4 (0.110)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC  >  NC_000913/1207648‑1207932
                                                                                                                                              |                                                                                                                                              
ctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagctcataagaatgttaaatccccctggtaaaagcaggaatgatgacatttgcttgttatttcttcattttcataaacgt                                                                                                                                                <  2:244808‑M1/1‑1 (MQ=255)
 tggtggAGGCACCCGGGGCCAGCCTGGAGCAGGGGCGGCACGACCACTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTT                                                                                                                                               <  1:229309‑M1/143‑1 (MQ=255)
  ggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                              <  1:579475‑M1/143‑1 (MQ=255)
     gggggcttCCGGTGCCAGTCCGGAGACGGGTCGGCAGGACCGGTTCCGTGCCGCCCTTCGCGCGCTGCTGTTACGCCGCAAGAATCCGTTGGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                           <  2:495197‑M1/140‑1 (MQ=255)
     ggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                           <  1:602897‑M1/143‑1 (MQ=255)
      gAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTT                                                                                                                                          >  2:586847‑M1/1‑143 (MQ=255)
        ttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                        >  2:160656‑M1/135‑143 (MQ=255)
        ggCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                        <  1:475112‑M1/143‑1 (MQ=255)
           agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataacagTTGGGTTGGgag                                                                                                                                     <  1:245922‑M1/12‑1 (MQ=255)
              gcattacgttgtagatctgtgttctagtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                                                                  >  2:328780‑M1/129‑143 (MQ=255)
                ttttcgttgtagatccgtgctcgggtaatttgttgatacgcgtacaaagccaataagcatgttaaatccacctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                >  1:28116‑M1/127‑143 (MQ=255)
                attacgttgtagatctgtgttctggtcatttgttgatacgcgtacttcggttgaaagcttaaaaaaaccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                >  1:711526‑M1/127‑143 (MQ=255)
                attacgttgcagctctgcgtgctgggcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcagaaacgTTGGTTTGGGAGAAGGa                                                                                                                                >  1:279089‑M1/127‑143 (MQ=255)
                  tacgttggagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGc                                                                                                                              >  1:22036‑M1/125‑143 (MQ=255)
                    cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACCGTGCAAACGGCTCTCGAAAACCTTGGCTTGGGAGAAGGctctg                                                                                                                            >  2:461912‑M1/1‑138 (MQ=255)
                      ttgtatatttttgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                          >  2:400696‑M1/121‑143 (MQ=255)
                        cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCCTGGTTTGGGAGAAGGctctgcatt                                                                                                                        >  1:472824‑M1/1‑134 (MQ=255)
                          ggATAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                      <  1:581456‑M1/143‑12 (MQ=255)
                           gatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTTGGCGCAGGAGCACACCTCaa                                                                                                                     <  1:191636‑M1/28‑1 (MQ=255)
                           gatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                     <  2:300384‑M1/28‑1 (MQ=255)
                           gagaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTCAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAGCGCCTCCAGAAAACCTTGGTTTGGCAGGAGGctctgactcacc                                                                                                                     >  2:622854‑M1/1‑131 (MQ=255)
                           gagaAGGGGCGGCACGACCAGTTACTTACCGAACTTCGCGCGGTGGCGTGAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacc                                                                                                                     >  1:491580‑M1/1‑131 (MQ=255)
                            atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                    <  2:566371‑M1/29‑1 (MQ=255)
                               tgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgGTGGTTTGGGAGAAGGAGCACAATTCAATgca                                                                                                                 <  2:233134‑M1/32‑1 (MQ=255)
                                   ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGGGAAGGAGCAAAACTCActccagcca                                                                                                             <  1:110871‑M1/36‑3 (MQ=255)
                                   ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                             <  2:323606‑M1/36‑1 (MQ=255)
                                   gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCTCAAGAATCCGTTTGGCGGTATCGAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtg                                                                                                             >  1:544169‑M1/1‑123 (MQ=255)
                                       cACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                         >  2:269722‑M1/1‑119 (MQ=255)
                                             ttgttgatactcgtacatagtcaataagcatgttaaatacccctggtaaaagcaggaatgatgccatttgctggttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTacact                                                                                                   >  2:322498‑M1/98‑141 (MQ=255)
                                               gctgagacgcgggcagagccaataagcatggtaaatcgccctggtaaaagcaggaatgatgccatttgcttgttatttctgcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAg                                                                                                 >  1:186622‑M1/96‑143 (MQ=255)
                                                  acttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGCTGGCACTGTGCCAACGGCTCTCGAAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                                                                              >  2:498901/1‑143 (MQ=255)
                                                   cttacCGCACTCCGCGCGCTGCTGTTAAGCCGCCCGAATCCGTTTGGCGATATCAAGTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                             <  2:212078‑M1/143‑37 (MQ=255)
                                                   atacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttagttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCCGCAACGGCTGCACTCGGACg                                                                                             <  2:407166‑M1/52‑1 (MQ=255)
                                                       gcgtacatagccaataagcatgttaaatccccctggtaaaaacagaaatgataccatttacttgtaatttcttcattttcataaacgTTAGCTTCGTAGAAGGAGCAAAACTCAATGCAACACCGGCAACATCAGGACGCAcc                                                                                         <  2:230379‑M1/56‑1 (MQ=255)
                                                         gCACTGCGCGCGCTGCTGTTAGGGCGCAAGAATCCGTGTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                       <  1:569542‑M1/143‑43 (MQ=255)
                                                           acatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                                                     <  2:62468‑M1/60‑1 (MQ=255)
                                                                    gctgctGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGCAGGctatccactaccttttggtgtcgcggtcccgaggccttcagcccctccgccaa                                                                            >  1:446074‑M1/1‑90 (MQ=255)
                                                                     taagcatgttaaagccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                                                                           >  1:137789‑M1/74‑143 (MQ=255)
                                                                        ctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTCGGTTTGGGAGAAGGctctgcattacctgttggagtaccggtaccgtggccttgagacactccggcaatcgg                                                                        >  2:108507‑M1/1‑86 (MQ=255)
                                                                         tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggc                                                                       >  2:231067‑M1/1‑85 (MQ=255)
                                                                         tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGAACTCTCCAATTTTTGCTCTATTTCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                       <  1:329704/143‑1 (MQ=37)
                                                                          gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggct                                                                      >  1:572389‑M1/1‑84 (MQ=255)
                                                                          atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                      <  2:157498‑M1/75‑1 (MQ=255)
                                                                           ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAACGGTTTCATAGCTATACCgga                                                                     >  2:324931/1‑142 (MQ=255)
                                                                             ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAACCTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                   <  1:20775‑M1/78‑1 (MQ=255)
                                                                                ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAACCGGCTCTCGCACACCTTGGCTTGGGCGACGGctctgcattacctgttggtgtcccggttccgtggcctccagccaccccgccaccacgctgcccgc                                                                >  2:190863‑M1/1‑78 (MQ=255)
                                                                                ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggccggccga                                                                >  2:308716‑M1/1‑78 (MQ=255)
                                                                                   cAAGAGTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaat                                                             <  2:491580‑M1/143‑69 (MQ=255)
                                                                                    tctttggtagaaggagtaatgaggcaatttgattgttatttcttaattttcataaaggTGGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                            >  1:309462‑M1/59‑143 (MQ=255)
                                                                                     ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                           <  2:333716‑M1/86‑1 (MQ=255)
                                                                                       ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACGTTAGGACGCACCGGTGTCATAGCTATACCGGTTATGGTtggtgg                                                         <  1:23576‑M1/88‑1 (MQ=255)
                                                                                         tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctatgcattacctgttggtgtcccggatccgtggccttcagccactccgccaacaggctggctgaaatgcaatg                                                       >  1:290645‑M1/1‑69 (MQ=255)
                                                                                            aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                    <  2:254305‑M1/93‑1 (MQ=255)
                                                                                             aaagcaggaatgatgccatttgcttgttattacctacttttcttaaacgTTGGTTTGGGAGATGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                   >  1:362767‑M1/50‑143 (MQ=255)
                                                                                              gtgGCGATATGAAATCGGATGGCACGGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgcc                                                  <  2:443950‑M1/142‑80 (MQ=255)
                                                                                                   gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgacatgcaatggtgccgcttt                                             >  1:405819‑M1/1‑59 (MQ=255)
                                                                                                    gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                            >  1:566371‑M1/43‑143 (MQ=255)
                                                                                                    gaaggatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                            >  1:576354‑M1/43‑143 (MQ=255)
                                                                                                       tgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa                                         >  1:182277‑M1/40‑143 (MQ=255)
                                                                                                         aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgacgtgcaatggtgccgcttgttctgc                                       >  1:182160‑M1/1‑53 (MQ=255)
                                                                                                         aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgccttttctgc                                       >  2:93104‑M1/1‑53 (MQ=255)
                                                                                                          tggcatttgtttgttatttctttattttcataaacgTGGGGTTGGGAGAAGGAGCAAAACGGAATGCAGCAACGGCTACATTAGGACGCACCGGTCTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                      >  1:537676‑M1/37‑143 (MQ=255)
                                                                                                           ggcgtttgtgtgttctgtcttcattttcagaagcgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCa                                     >  2:245922‑M1/36‑143 (MQ=255)
                                                                                                                    ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                            <  1:272061‑M1/117‑1 (MQ=255)
                                                                                                                     aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgacgaataccc                           >  1:134774‑M1/1‑41 (MQ=255)
                                                                                                                       tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgg                         >  1:96381‑M1/1‑39 (MQ=255)
                                                                                                                         atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATGAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATGCAGTGGCGGTgg                       <  2:158469‑M1/122‑1 (MQ=255)
                                                                                                                               cGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                 <  2:595649/143‑1 (MQ=255)
                                                                                                                                 attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc               <  1:102481‑M1/130‑1 (MQ=255)
                                                                                                                                   tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg             <  1:586847‑M1/143‑117 (MQ=255)
                                                                                                                                   tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaacggggaagcg             >  2:607232‑M1/1‑27 (MQ=255)
                                                                                                                                    ttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa            >  1:74629‑M1/11‑143 (MQ=255)
                                                                                                                                    ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc            >  2:176159‑M1/1‑26 (MQ=255)
                                                                                                                                       gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctta         >  2:225714‑M1/1‑23 (MQ=255)
                                                                                                                                         aaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc       <  1:269722‑M1/143‑123 (MQ=255)
                                                                                                                                           aCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccg     <  1:225714‑M1/143‑125 (MQ=255)
                                                                                                                                             cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttcggtggccttcagccactccgcgaacaggctggctgaaatggaacggtgccgctctttcggctgaagcataccgggaactgcggagggcttagccgac   >  2:438503‑M1/1‑17 (MQ=255)
                                                                                                                                              TTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTAGTGGTATTGAGCAATCAGTAATCATTCAGCGGGCGTGGAATGCCGCAAATGCATctgga  <  2:749‑M1/143‑3 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCC  >  NC_000913/1207648‑1207932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.