| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.030) | 33 (0.840) | 30/284 | 0.3 | 97.1% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.030) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
TATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCC > NC_000913/4001505‑4001782 | tATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGCCCCGTTTCCTTGAAGCCGGCGTCGTCCTTCattcc > 1:350460/1‑140 (MQ=255) gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGAATACGGTCGGGTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg > 1:300605‑M1/1‑126 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTGGCTTTGCAGACGACGCCGGCCTGCAGctccttcttctcttttgc > 1:339286‑M1/1‑125 (MQ=255) acgacgacgAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgga < 1:384355‑M1/143‑28 (MQ=255) gacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaag > 1:632789‑M1/1‑114 (MQ=255) acgacgaGCGCCGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCACCCCGCCCGGAAGTGGAAGACATCGAAGCCTCGGCACGTTTCTTTGAAGGTGACGGCGGCCACCAGctccttcttcttctttgaagatgcggaaga < 2:351238‑M1/143‑31 (MQ=255) aGCAACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgc < 1:389514‑M1/143‑37 (MQ=255) gACTGCGCGTACAATCTTATCGTGGCCATAGCCTGGCAATCCGCCCGGTACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgg < 2:77842‑M1/143‑40 (MQ=255) cgcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATGGGAAAGTTTCTTTGAAGACGACGACGGCCTGCATttccttcttcttctttgacgatgcggaggatcacgcccgtaacg > 2:388523‑M1/1‑99 (MQ=255) gTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCAACGGATCTTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttgcaagttgcggaaggtaacaccagtaactcaa > 1:269072‑M1/1‑96 (MQ=255) aaTCCGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt < 1:424239‑M1/143‑52 (MQ=255) ttgacttGGGCAGAGCCTGGCAACCCGCCCGGAACTGAAAGACATCGAAGCACCGGCACGTTTCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggca < 2:110811‑M1/140‑56 (MQ=255) tGAGCTTTGCCAGAGCCTCGCAACCCTCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcctctttgaagatgcggaagatcacgccggtaactccactgtggca < 2:716588‑M1/143‑56 (MQ=255) cTTCGCCAGGGCCTGGCAACCCCCCCGTTACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta < 2:21960‑M1/143‑60 (MQ=255) gCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 1:424214‑M1/143‑70 (MQ=255) gtgGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 1:71883‑M1/142‑72 (MQ=255) ccgcccgGAACTGGAAGACATCGAATCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgggaactccactgtggcatttaccgtccgtgctgctcggctg > 1:648614‑M1/1‑64 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt < 2:145898‑M1/143‑82 (MQ=255) cccgGAACTGGAAGACATCTAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttt < 1:549512‑M1/143‑83 (MQ=255) aaCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcgcgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct > 1:63121‑M1/1‑56 (MQ=255) cttgAAGACATCTAAGCATCGGCACGTTTTTTTTTAGTTTACGTCGTCCTGCAT‑‑‑‑‑CTCCCGCTTCGACTGTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 1:178527/140‑1 (MQ=255) gagACGTCGCCGCGTCCGCACGTTTCTTTGAACACGACCACGGCCTGCATctgcttcctcttctttgaagctgcggaagatcacgccggtaactccactgtggcatttaccatccttgatggtcgtctgtttactctgcgtga < 2:152266‑M1/142‑94 (MQ=255) aGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgag > 1:448450‑M1/1‑49 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgggggatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgggcgtga > 1:99915‑M1/1‑44 (MQ=255) gcttcggTACTTTTCTTTGAAGACGACGACGGCCTGCATctcctgctgcgtcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 1:203682‑M1/140‑105 (MQ=255) ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgct > 1:367062‑M1/1‑34 (MQ=255) cGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttc < 1:634092‑M1/143‑114 (MQ=255) gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgttcgcgtgtactgcccgcttttcg > 1:613333‑M1/1‑29 (MQ=255) ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc < 1:504786‑M1/143‑117 (MQ=255) tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcctgcttttggtct > 2:205981‑M1/1‑26 (MQ=255) aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgcctgtttactctgcgtgagcgtgaactgcccgcgtttcggctgcacac > 2:378601‑M1/1‑20 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgcgcgtgtactgcccgcttttcttctgtatcgtatgcgtg > 1:88822‑M1/1‑12 (MQ=255) gacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtg > 2:526254‑M1/1‑12 (MQ=255) ggCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgccc > 1:356542‑M1/1‑9 (MQ=255) cgcAGctccttcctgttctgtgggggtgcggaagctcacgccggcaactccacggtggcatttaccctccgtggtggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtag < 2:99915‑M1/142‑139 (MQ=255) | TATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCC > NC_000913/4001505‑4001782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |