Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)33 (0.840) 30/284 0.3 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)52 (1.320) 47/284 0.0 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

TTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGAC  >  NC_000913/1292897‑1293179
                                                                                                                                              |                                                                                                                                            
ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTCTTTTGTgccg                                                                                                                                              >  2:396845/1‑143 (MQ=255)
ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGAGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccg                                                                                                                                              >  2:373880/1‑143 (MQ=255)
   aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                           <  1:444738‑M2/143‑4 (MQ=255)
    cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTCgcgccgccca                                                                                                                                          <  2:19644‑M1/12‑3 (MQ=255)
      gtggtggttttgccgtgacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaata                                                                                                                                        >  2:681780‑M1/130‑143 (MQ=255)
       cggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataa                                                                                                                                       >  1:142668‑M1/129‑143 (MQ=255)
        tttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga                                                                                                                                      >  2:92088‑M2/1‑135 (MQ=255)
         ttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgac                                                                                                                                     >  1:523394‑M2/1‑134 (MQ=255)
             ttttgccgttacgcaccaccccgacagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCt                                                                                                                                 <  1:102933‑M1/21‑1 (MQ=255)
              tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCACTACATATCtt                                                                                                                                <  2:91902‑M1/22‑1 (MQ=255)
                 ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactt                                                                                                                             >  1:16838‑M2/1‑126 (MQ=255)
                 gccgggacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc                                                                                                                             >  1:278159‑M1/119‑143 (MQ=255)
                    gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATa                                                                                                                          <  2:38461‑M1/28‑1 (MQ=255)
                    gCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAAAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTATGCCGggtaatcactccaccttctt                                                                                                                          <  2:701787‑M2/143‑21 (MQ=255)
                     ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTCTGCCGCCAATAAATCTCTTTTCATaa                                                                                                                         <  1:277127‑M1/29‑1 (MQ=255)
                      tCATTGTAGTAAGCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattga                                                                                                                        >  1:315716‑M2/1‑121 (MQ=255)
                       ccgcaccaccccgtcagtagctgaacaggaggcacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                                                                       >  1:405905‑M1/113‑143 (MQ=255)
                       acgcaccaccccgtcagtagctgaacaggagggacagctgatagcaacagaagccactggagcacctcaaaaacaccatcatccactaactcagtaagttggcagcatcaccTTGTGCCGCCAATAACTATCTTTTCATaaaa                                                                                                                       >  2:15493‑M1/113‑143 (MQ=255)
                         ttGTAGTAATCTCAAACTTATATTGGGGTTGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatag                                                                                                                     >  2:40990‑M2/1‑118 (MQ=255)
                           accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATACAATTAg                                                                                                                   <  1:597020‑M1/35‑1 (MQ=255)
                             cacgccgtcggtggctgtagaggagggacagctgatagaaacagaagccagtggagcacttgaataacaccatcatacactacatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGcc                                                                                                                 >  2:467962‑M1/107‑143 (MQ=255)
                             caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                                     <  2:432189‑M1/17‑1 (MQ=255)
                             caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                                     >  1:432189‑M1/107‑123 (MQ=255)
                                 aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCACTAGCCAGGCATGTAAGGAATTCACACTTGTTCTTTATTTTGTGCCGggtaaagactacaacaaaatgatagtgtgttat                                                                                                             <  1:316016‑M2/143‑34 (MQ=255)
                                  cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaa                                                                                                            <  1:627753‑M1/42‑1 (MQ=255)
                                    tcAAATTTATATGGGGGTGGTTTGTTGAGGTAATCATTGGGCCTTAAATGCAGTTGTGCAATAGCCAGGAATGTAAGGAATCCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                          >  2:91545‑M2/1‑107 (MQ=255)
                                    tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                          <  2:152080‑M2/143‑37 (MQ=255)
                                      atactGATATGGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAGTGGGTCTTTATGTTGTGCCGggtaatgacgccaacttattgatagtgttttatgttca                                                                                                        >  1:204545‑M2/3‑105 (MQ=255)
                                       aaCTTATAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcag                                                                                                       >  2:196479‑M2/1‑104 (MQ=255)
                                        tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactacatcagtaagttggcagcatccccTTGTGCCGCCAATAAATATCTTGTCATAAAATTAGCCAGAAAAgactc                                                                                                      <  2:303246‑M1/48‑3 (MQ=255)
                                         agctgaaccggagagatagctgacaagatcagcatccactggagcacgtcaaaaacaccatcatacactaaatcattaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgcg                                                                                                     >  2:343834‑M1/95‑143 (MQ=255)
                                              atgaggggggtttgGTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                                >  2:372157‑M2/5‑97 (MQ=255)
                                              aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTGTCATAAAATTAGCCAGAGAAGCCGCGgcaga                                                                                                <  1:203625‑M1/54‑3 (MQ=255)
                                                cagtagggacagctgatagaaacagaagccactggagcatctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                              >  2:458035‑M1/88‑143 (MQ=255)
                                                   gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTGCATAAAATTAGCCAGAAAAGACGCGGCATATGGcc                                                                                           <  1:269923‑M1/59‑1 (MQ=255)
                                                     gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCt                                                                                         <  1:567978‑M1/61‑1 (MQ=255)
                                                       gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGCAAACACGCGGCATATAGCCCtac                                                                                       <  2:655457‑M1/63‑2 (MQ=255)
                                                         ttgttgAGGTAATCATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                     >  1:416236‑M2/1‑86 (MQ=255)
                                                         cagcggatagaaacagaagccactggcgcacctcaaaaacaccatcatacactaaagcagtaagttggcagcatcaccGTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAttt                                                                                     >  2:705278‑M1/79‑143 (MQ=255)
                                                          agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTa                                                                                    <  2:321309‑M1/66‑1 (MQ=255)
                                                           gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                                   >  1:662850‑M2/1‑84 (MQ=255)
                                                            ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCctatttcca                                                                                  <  2:204858‑M1/68‑4 (MQ=255)
                                                             tgatagcaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                                 >  1:74961‑M1/75‑143 (MQ=255)
                                                              gAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                <  1:508406‑M2/143‑63 (MQ=255)
                                                                 agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATATCCCTATTTACACCgat                                                                             <  2:522859‑M1/73‑1 (MQ=255)
                                                                    ataataCTGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAAGTGTTCTTTATTTTGTGCCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct                                                                          >  2:24386‑M2/1‑75 (MQ=255)
                                                                         agagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                     <  1:713933‑M2/143‑74 (MQ=255)
                                                                         aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgc                                                                     >  1:277569‑M1/63‑143 (MQ=255)
                                                                          gagCCTTAAATTCAGTTGTGCAATAGCCAGGAGTGTAAGGAATTCAAAATTGTTCTTTCTGTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcaggtccaccg                                                                    <  1:341941‑M2/143‑75 (MQ=255)
                                                                          agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgca                                                                    >  2:102933‑M1/62‑143 (MQ=255)
                                                                              actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATCGCCCTATTTACACCGATGATtttgcagtac                                                                <  1:591479‑M1/86‑4 (MQ=255)
                                                                                tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactgccacatatggatagtgttgcacggtctgataatgcccgatgactttgtcatgcagctccaccgattttg                                                              <  1:195491‑M2/143‑81 (MQ=255)
                                                                                 tgattCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                             >  2:555317‑M2/3‑62 (MQ=255)
                                                                                 gaagcaccacaaaaacaccagcatacactaaatcagtaaggtggcagcatcaccTTGTGCCGCCAATAAATATCTGTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTg                                                             >  1:203715‑M1/55‑143 (MQ=255)
                                                                                  gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAGAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGcacgaga                                                            <  1:406443‑M1/90‑4 (MQ=255)
                                                                                      acctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGtt                                                        <  1:568525‑M1/94‑1 (MQ=255)
                                                                                         ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                     >  1:538450‑M2/1‑54 (MQ=255)
                                                                                         tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                                     <  2:392270‑M1/97‑1 (MQ=255)
                                                                                         tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                                     >  1:38461‑M1/47‑143 (MQ=255)
                                                                                         tcaaaaacaccatcatacactaaatcaataagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATAACGCAGCACGAGAGGCTaaa                                                     <  2:435357‑M1/97‑1 (MQ=255)
                                                                                          caaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaaa                                                    <  1:570881‑M1/98‑1 (MQ=255)
                                                                                              cAATAGCTAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgcatttgtccgacagcgccaccgattttgagaacgacagcgac                                                <  1:484389‑M2/143‑95 (MQ=255)
                                                                                              cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtagtgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaacgctttttagaacgacagcgcc                                                <  2:410637‑M2/143‑95 (MQ=255)
                                                                                                  aGCCAGTAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGagtaatgactccaacttattgcttgtgtgttattttcagataattcccgatgactttgtcatgcagctactccgattttgagaacgacagcgacttcc                                            >  2:151830‑M2/1‑45 (MQ=255)
                                                                                                  aGCCAGTAACGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                            >  1:315313‑M2/1‑45 (MQ=255)
                                                                                                  aGACACGAATCTATGGACGTCAAAATTTTTCTTTCTTTTGTCGCGggttatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                            >  2:205045‑M2/1‑45 (MQ=255)
                                                                                                   gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaaaacgacagcgtcttccg                                           <  1:431572‑M2/143‑100 (MQ=255)
                                                                                                    ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                          >  1:155374‑M2/1‑43 (MQ=255)
                                                                                                           cctaaatcagtaagttggcagcatcaccGTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca                                   >  2:93035‑M1/29‑143 (MQ=255)
                                                                                                           actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca                                   <  1:654531‑M1/115‑1 (MQ=255)
                                                                                                               aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTCAAAACTTCCTGATTCATgtcacaat                               <  1:74807‑M1/119‑3 (MQ=255)
                                                                                                               aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttctgttcagataatgcccgatgactttgtcatgcagctacaccgattttgagaacgacagcgacttccgtcccagccgtgc                               <  1:185675‑M2/143‑112 (MQ=255)
                                                                                                                  aaTTTAACATTGTCCTTTATTTTGCGCCGggtaatggctctaacttattgatcgtgttttatgttcagatcatgcccaatgcctttgtcatgcagctccgccgattttgagaacgacagcgacttccgtcccagccgtgccag                            >  2:471720‑M2/1‑29 (MQ=255)
                                                                                                                   agtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCCCATTTTAt                           <  1:605925‑M1/123‑1 (MQ=255)
                                                                                                                   aTTCAAATGTGTTCTTTATTTTGTGCCGggtaatgtctccaacttattgatagtgttttatgttcagataatgtctgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtctcatccgtgccagg                           >  2:157665‑M2/1‑28 (MQ=255)
                                                                                                                    ttCAAAAATGTTCGTGATTTCCTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgccccattactttgtcatgcagctccaccgattttgagaacgatagcgacttccgtcccagccgtgccaggt                          >  1:79379‑M2/1‑27 (MQ=255)
                                                                                                                    gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTATATg                          <  2:402713‑M1/124‑1 (MQ=255)
                                                                                                                     taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                         <  1:117062‑M1/125‑1 (MQ=255)
                                                                                                                     taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                         >  1:220577‑M1/19‑143 (MQ=255)
                                                                                                                              agcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTc                                         <  2:189175‑M1/109‑1 (MQ=255)
                                                                                                                              agcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTc                                         >  1:189175‑M1/10‑118 (MQ=255)
                                                                                                                               gcatcaccTGGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc               >  2:553778‑M1/9‑143 (MQ=255)
                                                                                                                                    accTGGTGCCGCCAATAAATATCTATTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg          >  1:604518‑M1/4‑143 (MQ=255)
                                                                                                                                     ccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc         >  1:655457‑M1/3‑143 (MQ=255)
                                                                                                                                           gccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTCAATCAAGTTAGTGTTTTTGGGGAGATTATCGTAGGCTgacga   >  1:297857/1‑143 (MQ=255)
                                                                                                                                            ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGACGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacgac  >  2:334529/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                            
TTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGAC  >  NC_000913/1292897‑1293179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.