New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 609415	38 (0.970)	3 (0.080)	3/268	5.7	7.7%	intergenic (+238/+44)	insL1/entD	IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex
	?	NC_000913	= 609431	36 (0.970)					intergenic (+254/+28)	insL1/entD	IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAA  >  NC_000913/609291‑609565                                                                                                                                             |                                                                                                                                       aCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCg                                                                                                                                      >  2:295614/1‑143 (MQ=255)      gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGa                                                                                                                                 >  2:92645/1‑143 (MQ=255)           gAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGt                                                                                                                            >  2:292093/1‑143 (MQ=255)            aGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTa                                                                                                                           <  1:376641/143‑1 (MQ=255)              gtgTCGTATTCTTCAGATGGTGCCGCCCGTAAGTGAGCGCGCATGGGAGTAAGCCGGGCATATCCGGTTGTCAGGTTAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTAcc                                                                                                                         <  1:238924/141‑1 (MQ=255)                  cgtagtcttcACGTGGTGCGACCCTCAAGTGCGCGGTTCAGGGAGTAGTCACCGCCTATCCGGGTGTCAGGTCAGGATGGTAAGGCCCCTGCTTTACGCTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAt                                                                                                                     <  1:688858/138‑1 (MQ=255)                  cGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAACCCCCGCATATCCGGTTGTCAGGTCAGGATGGCAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAt                                                                                                                     <  1:237318/143‑1 (MQ=255)                     aTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgtt                                                                                                                  >  1:161469/1‑143 (MQ=255)                        cttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCAGTGGTCAGTGATGGCTGCGGGCGAATCGTACCGGAggttggc                                                                                                               >  2:493791/1‑141 (MQ=255)                             gATGGTTCAAGCCTTGAGGTAGCGATTATGGGAGTAGTCCCCGCATGTCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTa                                                                                                          <  2:656740/143‑1 (MQ=255)                              aTGGTTCAACCCTTAAGTTAGCGCTTATGGAAGTAATCACCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGAGGGCTGCGGGCGAATCGTACCAGATGTTGTCAAttca                                                                                                         >  2:8712/1‑141 (MQ=255)                                  ttCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCgt                                                                                                     >  1:317794/1‑143 (MQ=255)                                        ccTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGCCAATTAAACGTGTTGGc                                                                                               >  2:598625/1‑143 (MQ=255)                                         cTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTGAATTAATCGTGTTGGca                                                                                              >  2:653900/1‑143 (MQ=255)                                          ttAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGcac                                                                                             >  1:507378/1‑143 (MQ=255)                                                           ggAGTAATCACCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGGGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTAGGAGTAtcat                                                                            >  2:687079/1‑141 (MQ=255)                                                               tAATCCCCGCATACCCGGTCGTCGGGTCAGGATGGTAAGACACCCACTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAtcttttct                                                                        <  1:59511/143‑1 (MQ=255)                                                                aaTCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTGTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAccttttcct                                                                       <  2:124286/143‑3 (MQ=255)                                                                 aTCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAtcttttcttt                                                                      <  1:292093/143‑1 (MQ=255)                                                                  tCCCCGCATATCCGGTTGCCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATcttttctttt                                                                     <  1:295614/143‑1 (MQ=255)                                                                     ccGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGCTGTTGTCAATTAATCGTGTTGGCACAGCGTTATGCCTATCTTTTCTTTTATc                                                                  >  1:696101/1‑143 (MQ=255)                                                                             ccGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTg                                                          <  1:92645/143‑1 (MQ=255)                                                                               ggatGTCAGGTCAGGAGGGTAAGGCACCTGCGTTACACTTTCGCCCGGGGTAAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCAGAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGca                                                        <  1:208384/140‑1 (MQ=255)                                                                               ggTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTACTCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGACAGTGca                                                        >  1:32416/1‑143 (MQ=255)                                                                                        gtcaggATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCACTGCACAGCAAACa                                               >  2:205052/1‑143 (MQ=255)                                                                                             gATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCa                                          <  1:690082/143‑1 (MQ=255)                                                                                                      tcatcTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGa                                 <  1:631160/139‑1 (MQ=255)                                                                                                      gCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACACCAAAGATCTCATTCTCGCGa                                 >  1:460191/1‑143 (MQ=255)                                                                                                          cTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACCGCGTTATGACTATCTTTTCTTTTATCTGCCAGTTCCCCGCAAACATCTCATTAACACGatgaa                             >  1:39786/1‑143 (MQ=255)                                                                                                           tGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGAGAATCGTACCAGATGTTGTCAATGAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCAAAGCAAACATAGCAATCTCACGatgaat                            >  2:218422/1‑143 (MQ=255)                                                                                                                   acTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGCATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATAACTATCTATTCTTTTATCTGCCAGTGCACACCAAACATCTCATTCTCACTATGCATGATGACct                    >  1:598359/1‑143 (MQ=255)                                                                                                                     tttCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGGTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTAACGATGAATGATGACctgc                  >  1:90717/1‑143 (MQ=255)                                                                                                                      ttCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACctgct                 >  1:355391/1‑143 (MQ=255)                                                                                                                           ccGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGGATGATGACCTGCTGTTTa            >  2:570434/1‑143 (MQ=255)                                                                                                                             gTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTAtt          >  1:468193/1‑143 (MQ=255)                                                                                                                                gTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCa       <  2:161469/143‑1 (MQ=255)                                                                                                                                 tcggTGATGGCTGCGGGCGAATTGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAg      <  1:324551/140‑1 (MQ=255)                                                                                                                                     tGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTACCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTac  >  1:362976/1‑142 (MQ=255)                                                                                                                                             |                                                                                                                                       ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAGCTAA  >  NC_000913/609291‑609565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.