| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 110 (1.460) | 68/284 | 0.0 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 116 (1.540) | 69/284 | 0.0 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
CTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGT > NC_000913/2101608‑2101882 | cTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACAAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTACTATAG‑GAGTTTATGATTTATTaagg > 2:805562/1‑143 (MQ=255) ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTaagga > 2:249284/1‑143 (MQ=255) ttCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCCTTAG‑GAATTTTTGTTTTATTcagga > 2:637122/1‑143 (MQ=255) cacaGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GCATTTTTGTTTTATTaaggaag > 2:497468/1‑143 (MQ=255) aGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTCTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTg > 2:235540/1‑143 (MQ=255) aGTACATAAAGTAAACTTGATCGAAGCCATTTACACAAACAAAATCTGAAAAACGTACAAGCATAAATAATCCTACGCACCAATCAACAACCGTATAAGAATAATTTCTTTTATTAG‑AAATATTTATTTTATTaaggattgtg > 2:534057/1‑138 (MQ=255) cATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGaa > 1:686757/1‑143 (MQ=255) aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAAt > 1:903774/1‑143 (MQ=255) aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAAt > 2:441317/1‑143 (MQ=255) aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACGTTCGTTAG‑GAATTTTTGTTTTATGAAGGAAGGTGCGGAt > 2:381319/1‑143 (MQ=255) ccTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGa < 2:466908/143‑1 (MQ=255) cTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGaa > 1:1127253/1‑143 (MQ=255) cTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGaa > 2:495872/1‑143 (MQ=255) ttGATCGAAGCCATTTACACGCACACAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGaaa < 2:1358993/143‑1 (MQ=255) ttGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTAACGGCGGATATGATCCTGCGCACCACTCAAAGACCGTATCAGAATAGATACTTACTTTCG‑GAAGTTTTGTTTTATTCATGAAGGTGCGAATTAGCGCGGaaa > 2:96739/1‑143 (MQ=255) aTCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGGAAttc > 1:1258256/1‑143 (MQ=255) tCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAACttct > 2:1187334/1‑143 (MQ=255) tCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAAttct > 1:904871/1‑143 (MQ=255) cGACGCCATTTACAAGCACAAGAGCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAGCCGTATCAGAATAGATACTTTCTTTAG‑GAATTCTTGTTTCATTAAGGAAGGTGCGAATAAGCGGGGAAAttctt < 2:1192232/143‑1 (MQ=255) aaGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATtcttct < 1:7535/143‑1 (MQ=255) aTTTACACGCACAAAATCTGAAAAACGTACCAGCATCCATGCTGTTGCCCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt < 2:1322420/143‑1 (MQ=38) aTTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTAGTTTTATTAAGGAAGGAGCGAATAAGCGGGGAAATTCTTCTCGGCt > 2:810514/1‑143 (MQ=255) acGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGATGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa > 2:1142996/1‑143 (MQ=255) acGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCACAATAGATCCTTTATTTAG‑GAATTTTGGGTTTACAATGGAAGGTGCGAATAACAGGGGAAATTCTTCTCGACGGACTCa > 2:166559/1‑143 (MQ=255) acaAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca > 1:204719/1‑143 (MQ=255) caaaTCTGCAAAACGTACCCGCATAAATGATCCTGCGCACCAATCGACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt < 2:999910/142‑1 (MQ=255) aaaaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGTCTGACTCAGtcatt > 2:1012399/1‑143 (MQ=255) aaaaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt > 2:250449/1‑143 (MQ=255) caTCTGAAAGACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttc < 1:1067674/142‑1 (MQ=255) aaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttc > 1:13982/1‑143 (MQ=255) tcagAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat < 1:821544/140‑1 (MQ=255) tCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat > 1:909751/1‑143 (MQ=255) tCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACGTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat < 2:899689/143‑1 (MQ=255) tGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt < 1:802354/143‑1 (MQ=255) aacaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCCTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttct < 2:1096625/140‑1 (MQ=255) aaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTCTCAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCATTTCATttcttc > 2:476960/1‑143 (MQ=255) gttccAGCATAAATGATCCTGCGCACCAATCAACAGCCGGATCAGAA‑AAAAACACCGTTGGGTGTGTTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt < 1:993541/140‑1 (MQ=17) aaTAAATGATCCCGCGCCGCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc < 2:986625/142‑1 (MQ=255) aTAAATGATCCTGCGCACCAATCAACAACCGTATCAGACTAGTTAATTTCTGTGG‑CTTAATTGGTTTTTTTAGGAAAGCGGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg > 1:315767/1‑143 (MQ=17) aaaTGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAt > 1:909947/1‑143 (MQ=255) gATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttttt < 2:686757/143‑1 (MQ=255) aTCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt < 1:1316840/143‑1 (MQ=255) tGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTcc > 2:766335/1‑143 (MQ=255) tGCGCACCAATCAACAACCGTATCAGAATAGATACGTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTcc < 2:1292213/143‑1 (MQ=255) cACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAACCGATTTTTTCTCCCGTa > 1:678416/1‑143 (MQ=255) aCCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa < 2:963552/143‑1 (MQ=255) cAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAAGTTTGAGCCGCTTTGTTCTCGTGTAAAt > 1:1051019/1‑143 (MQ=21) caacaaCCGTATCAGAATAGATACCTTCTTTCA‑TATTTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCt < 1:249284/143‑1 (MQ=18) aacaacCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATCCCtt > 2:1228188/1‑143 (MQ=255) aacaacCGTAGCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt < 2:620643/143‑1 (MQ=255) caacCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGTGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGACGATTTTTTTTCTCGTAAAtactttta > 2:1241492/1‑136 (MQ=21) caacCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCCTTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa > 2:659851/1‑143 (MQ=255) ttccttATCAGTATCGGTACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGTCTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa < 2:756131/138‑1 (MQ=17) aactctATCAGAATAGATATTTTCTTTAG‑AGATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTTATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa < 2:496703/138‑1 (MQ=17) acCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTATTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtttcat > 2:1006961/1‑139 (MQ=255) gTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg < 1:1062374/143‑1 (MQ=255) aTCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCACTTCTTCATGGTGGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGcc > 2:283646/1‑143 (MQ=255) aGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTTATGTTTGAGCCGATTTTTTCTCCCGTAAATTTCTTGAATCAGCCtct > 2:717242/1‑141 (MQ=255) aaTAGAGACTTTCTTTAG‑GAAGTTTTGTTGTATTAAGGGAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAttt < 2:1153843/143‑1 (MQ=255) aGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGa < 2:315767/143‑1 (MQ=255) aTACTTTGTTTAG‑TAATTTTTGTTTTATTAAGTAAGGGTCGTATTAGTGGTGAACTTCTTCTCGGCTTACTCTGTCAGTTCATTTCTTCATGTTTGAGTCTATTTTTTCTTCCGTATATGCTTTGAATCAGCCTATTTAGAcc < 2:350582/143‑1 (MQ=14) aTACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTAGGATGTCTCAACCATTTCATTTCTTCATGTTTGAGCCGCTTTTTTCTCCCGTCAATTCCTTGTTTCAGCCTCTTTGGAcc > 2:163451/1‑143 (MQ=17) tttctttAG‑GAATTTTTGTTTTATTAAGGAAGGTTCGATTAATCGGGTATTTTCTTCTTTGCTGCCTCTGTCAGTTCATGTCTTCATGTTTTATCCGATTTTTTCTCTCGTATATTCCTTGATTCAGGTTGTTTAGATCGttt > 2:1191651/1‑143 (MQ=255) tttctttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGttt > 1:1319949/1‑143 (MQ=255) tttctttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCGCCTGTAAATGCCTTGAATCAGCCTAATTTGACCGttt > 2:1252568/1‑143 (MQ=255) ttctttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttc < 2:788680/143‑1 (MQ=255) tctttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttct < 2:1127253/143‑1 (MQ=255) tttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc > 1:790619/1‑143 (MQ=255) ttAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg > 1:579632/1‑143 (MQ=255) tAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCTGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGc < 1:684703/143‑1 (MQ=255) aG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCTGTAAATGCCTTTAATCAGCCTATTTAGACCGTTTCTTCGcc > 2:38047/1‑143 (MQ=255) aG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGcc > 2:218136/1‑143 (MQ=255) gAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAt > 2:1023439/1‑143 (MQ=255) tttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg < 1:242112/143‑1 (MQ=38) ttttATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGGATCAGTCATTTAATTTCTTCATGTTTGAGCCGCTTTTTTCTCCCGTAAATGCCTTGAATCAGCCTGGTTCGACCCTTTATTCCCCGATTAAGGCGt > 2:233528/1‑143 (MQ=11) ttttATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCGTATTTAGACCCTTTCTTCGCCATTTAAGGCGt > 2:383515/1‑143 (MQ=21) | CTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAG‑GAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGT > NC_000913/2101608‑2101882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |