New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4254000NA (NA)4 (0.070) 4/270 8.3 NA noncoding (100/130 nt) RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
?NC_000913 = 4254030 NA (NA)noncoding (130/130 nt) RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

GGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTC  >  NC_000913/4253864‑4254141
                                                                                                                                        |                                                                                                                                             
tggcaTGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATGTATTGAATTTGCCGATTATGGAAGGCCGGa                                                                                                                                         >  1:239322/5‑143 (MQ=255)
   aaTGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCCATTTATTGAATTTGCAGATTATGGAAGGCCGTATaa                                                                                                                                      >  2:96109/1‑143 (MQ=255)
   aaTGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATaa                                                                                                                                      <  1:100156/143‑1 (MQ=255)
           acaggCATTGCTGGAGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGtttt                                                                                                                              <  1:116735/140‑1 (MQ=255)
           aCTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTAGTGAATTTGCAGATTATGGAGGGCCGGATAAGGCGtttt                                                                                                                              >  1:3881/1‑143 (MQ=255)
            cTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCACAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTc                                                                                                                             >  1:505807/1‑143 (MQ=255)
             tGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTcg                                                                                                                            <  1:229744/143‑1 (MQ=255)
             tGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTcg                                                                                                                            >  2:508410/1‑143 (MQ=255)
               gCATTTCTGATGACGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTcgcc                                                                                                                          <  1:1029443/143‑1 (MQ=255)
                       ggtgatgTAAAAAGGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCgg                                                                                                                  <  2:511800/141‑1 (MQ=255)
                           atgTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAAt                                                                                                              <  1:396389/143‑1 (MQ=255)
                            tgTAAGAAAGGCGGATGATCATCCGGCTTTCTTGTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAAtt                                                                                                             <  2:156968/143‑1 (MQ=255)
                              tAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTCCACAACAAATCGCAATTTATTGAATTTGCAGATTAGGGAAGGCCGGACAAGGCCATTTCTCCGCGTCCGGCCAtggt                                                                                                           >  1:616274/1‑140 (MQ=255)
                               aaaaaaGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtctc                                                                                                          >  1:547343/1‑143 (MQ=255)
                                aacaaGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCCATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtctct                                                                                                         <  1:667474/140‑1 (MQ=255)
                                 taaaGCCGGGTGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATtctctc                                                                                                        <  1:916300/142‑1 (MQ=255)
                                  aaaGCGGGCTGATCTTCGGGATTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTTAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTctctct                                                                                                       <  2:855299/143‑1 (MQ=39)
                                  aaaGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTCCACAACACATCGCAATTTATGGGAGTTGCAGATTGTGGCAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCCATTctccct                                                                                                       >  1:150521/1‑143 (MQ=255)
                                      ccGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGGTGAGTGGCGATTTGCTGACCTACACAACACATCGCAGTTTGTTGACTTTGCAGATTATGGAACGCCGGCTTAGGCGTTTTCGCCGCCTCCCGCACTTctctctactt                                                                                                   >  2:1071531/1‑139 (MQ=255)
                                        ggATGATCCTCCGGCTTTCTTCTCGGTGGCGTCAGGCGTGGAGCTTCTCAGGCCTAGACAACACATTGCAATTTATTGAATTTGCAGATTATGGCATGCCGGCTGCGTCTACCACTCCACATCTGGCAATTCTCACTGATTAc                                                                                                 <  2:784501/143‑1 (MQ=255)
                                         gatgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTAcc                                                                                                >  2:399006/1‑143 (MQ=255)
                                          atgatCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTAccc                                                                                               <  1:442016/143‑1 (MQ=255)
                                             atcatcCGTCTTTCTTCTGGGTTGCCTGATGCGCGGTGCTTTGCAGGCCTACATAAGTCATCGTAATTTATTGAATTTGCAGATTATGGAAGGCTGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTc                                                                                            <  2:25656/143‑1 (MQ=38)
                                             atcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGAGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTc                                                                                            >  1:741035/1‑143 (MQ=255)
                                             atcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTAAACAACACATCGCAATTGATGGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGGAGTTCTCTCTGATTACCATTc                                                                                            >  1:1002803/1‑143 (MQ=255)
                                              tcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCg                                                                                           <  1:634025/143‑1 (MQ=255)
                                              tcatcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGGTTTCGCCGCATCCGGCAATTCTCTCTGGTTACCCTTCg                                                                                           >  1:768089/1‑143 (MQ=255)
                                                atcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACTTCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGcc                                                                                         >  2:759782/1‑143 (MQ=255)
                                                atcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGcc                                                                                         >  1:902976/1‑143 (MQ=255)
                                                atcCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGcc                                                                                         <  2:845820/143‑1 (MQ=255)
                                                atcCGGCGGTCTTCTGGGTTGCCTGATGCGCGGCGCTTACCAGGCCTACACAAGACGTCGCAACGTATTGAGTTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGcc                                                                                         <  2:233633/143‑1 (MQ=38)
                                                       tttCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGGTTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTc                                                                                  >  1:924703/1‑143 (MQ=255)
                                                         tcttctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGc                                                                                <  2:577344/143‑1 (MQ=255)
                                                          cttctGGGTTGCCTGATGCGCGGCGGTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCa                                                                               <  2:368482/143‑1 (MQ=255)
                                                            tctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCAct                                                                             >  1:915737/1‑143 (MQ=255)
                                                             ctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCActc                                                                            >  1:782953/1‑143 (MQ=255)
                                                             ctGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGCAAGGCCGGATAAGGCGTTTCCACTGCACCCTGCACTTCTCTCTGATTACCCTTCGCCCTGCGTCGCActc                                                                            >  1:1038682/1‑143 (MQ=255)
                                                              tGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCActct                                                                           <  1:994029/143‑1 (MQ=255)
                                                                ggTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATACGGGGATTCACTCTTATTACCCTTCGCCCTGCGTCGCACTCTCa                                                                         >  2:770917/1‑143 (MQ=255)
                                                                   tGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATc                                                                      <  1:315262/143‑1 (MQ=255)
                                                                   tGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTAATGCACTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATc                                                                      <  1:352604/143‑1 (MQ=255)
                                                                   cgCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAACTTATTGAATTGGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGTCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATc                                                                      <  1:477135/142‑1 (MQ=255)
                                                                     ccTGACGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTCTTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTCCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGt                                                                    <  2:249864/143‑1 (MQ=255)
                                                                      cTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTc                                                                   <  1:506745/143‑1 (MQ=255)
                                                                      cTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTAGAGGTCAACGGGAGTGCGCTCTGATTACCCTTCGCCCTGCGTCGCCGTCTCAATCGTc                                                                   >  1:502491/1‑143 (MQ=255)
                                                                             gcggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTGAATCGTCAAACGCa                                                            >  1:909246/1‑143 (MQ=255)
                                                                              cggcgCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCAc                                                           <  2:162612/143‑1 (MQ=255)
                                                                                gcgcTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCCAACGCACGt                                                         >  1:696939/1‑143 (MQ=255)
                                                                                gcgcTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACga                                                         >  2:703076/1‑142 (MQ=255)
                                                                                     tctcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCAGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGAt                                                    <  2:466232/143‑1 (MQ=255)
                                                                                      ctcAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATg                                                   <  2:239322/143‑1 (MQ=255)
                                                                                          ggCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAAt                                               <  2:1003987/143‑1 (MQ=255)
                                                                                            ccTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCCAACGAACGTCTTATGTAATCa                                             >  1:144502/1‑143 (MQ=255)
                                                                                             cTACAGAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCaa                                            <  1:428956/143‑1 (MQ=255)
                                                                                             cTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGAAATGGCACCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCaa                                            <  1:250434/143‑1 (MQ=255)
                                                                                              tACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAAc                                           >  2:818693/1‑143 (MQ=255)
                                                                                                     cccaTCGCAATTGATTGAATTTGCAGATTACGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCGGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCa                                    <  2:854458/141‑1 (MQ=255)
                                                                                                        aTCGCAGTTTATTGACTTTGCCGATTATGGAAGGCCGGCTCAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTGGCCCTGCGTCGCACTCTCACTCATCAAACGCGCGTCTGCTCTAGTCACCTCCGccgccg                                 >  2:874560/1‑139 (MQ=255)
                                                                                                         tCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCaa                                <  1:692313/143‑1 (MQ=255)
                                                                                                         tCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTGCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCaa                                <  2:348935/143‑1 (MQ=255)
                                                                                                          cGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAAc                               <  1:329365/143‑1 (MQ=255)
                                                                                                           gCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATACGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCACAAGCCCGTCGGAAGGAATCAACTCCGACAGCAACt                              >  2:853228/1‑143 (MQ=38)
                                                                                                                 tATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATaaa                        <  2:547343/143‑1 (MQ=255)
                                                                                                                  aTTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAAc                       >  2:684439/1‑143 (MQ=255)
                                                                                                                  aTTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAAc                       <  2:681638/143‑1 (MQ=255)
                                                                                                                      aaTTGGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTc                   <  1:388237/143‑1 (MQ=255)
                                                                                                                       aTTTACAGATTATGGAAGGCCGGATACAGCGTTATATCCACATCCAACAATTCTCTCTGATTACCCAACGCCCATCACCACACTCACAATCACCAAACGCACATCAAATTAAAACAACTCCGCCAACAACTAAAAAACCATCa                  >  2:535736/1‑143 (MQ=255)
                                                                                                                             aGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGttt            <  2:204807/143‑1 (MQ=255)
                                                                                                                                  aTGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGcc       <  2:150521/143‑1 (MQ=255)
                                                                                                                                       cggCCTGAGAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTc  <  2:794594/142‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                             
GGCAATGAGTTACTGGCATTTCTGATGATGTAAAAAAGCCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATAAGGCGTTTTCGCCGCATCCGGCAATTCTCTCTGATTACCCTTCGCCCTGCGTCGCACTCTCAATCGTCAAACGCACGTCTGATGTAATCAACTCCGCCAGCAACTGATAAACCTTCATCGTTTCTGCCGGTTC  >  NC_000913/4253864‑4254141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.