New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2460605 =	34 (0.790)	3 (0.070)	3/266	6.2	8.6%	intergenic (‑136/+45)	fadI/yfcZ	beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein
	?	NC_000913	2460634 =	32 (0.790)					intergenic (‑165/+16)	fadI/yfcZ	beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGACCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGAAAGTCGGGGTGATTTTGCAAGGTTCAGA  >  NC_000913/2460504‑2460769                                                                                                                                   |                                                                                                                                        tGACCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGagag                                                                                                                             <  2:12919/143‑1 (MQ=255) ggcccTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGagag                                                                                                                             <  1:448896/140‑1 (MQ=255)   aCCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGa                                                                                                                           >  2:237137/1‑143 (MQ=255)   aCCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGAGAGTACGTACCCGAGAGGa                                                                                                                           >  2:612241/1‑143 (MQ=255)     cTGATCATAGTCTTAACCATTTTTTTACATTTAGCCCAGCGGAGGAAAGGGAACGTGGGAGCTATGACACAGCGCGAAAAGAAGAAGAGAAAAGAACACGCCCCTGCCAGCAACTGACGGCGGCGCGCGTACCCGCGAggcgc                                                                                                                         >  2:595062/1‑140 (MQ=255)      tGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGCGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGCCGGCGGCGTCCGTACCCACGAGGAAtt                                                                                                                        >  2:123645/1‑143 (MQ=255)        accATAGTCTTAACCCAATTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTaa                                                                                                                      <  1:206658/141‑1 (MQ=255)         tCATAGTCTTAACCATTTTTTTACATTTAGCCAACTGGAGCAAAGGGAAAGAGGGGGCTATCACACCGAGCGCAGAGAATCAGAGAAAAGCAGACGCCCCCGCCAGCCCCGGACGGGGGCGTGCGTACCCGTGACGACCTAAc                                                                                                                     >  2:779474/1‑143 (MQ=255)                  tAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGACGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTCCGTACCCGCGAGGAATTACCGCCGACCCa                                                                                                            >  1:125108/1‑143 (MQ=255)                       agtgctgtACGTTTAGGCAGGTGGAGAAAAGGGAAAGGGGGAGCTATGACACCGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTgg                                                                                                       <  1:304783/136‑1 (MQ=255)                               aCATTCAGCCAACTGCAGAAAAGCGAAAGTGGGAGCTATGACACACAAAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAg                                                                                               <  1:235684/143‑1 (MQ=255)                                 aTTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTAACCGCGCATAATTAACGCAGACCCAGCTGGAAAATCAGCa                                                                                             >  2:343556/1‑143 (MQ=255)                                      gCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAAGGGCGTACGTACCCGAGAGGAATTAACGCCGACCCAGCTGGACAATCAGCATTTCa                                                                                        >  2:604348/1‑143 (MQ=255)                                       tcAAGTGGAGAAGAGGGTAAGTGGGGGCTATGACAGAGAGAGTAGAGAGGGGGGGGTGGGTTGGCGCGCGTGGTAGTGACTGACAGGTGCGTACGTATCGGGGTGGGACGGGCGCAGACCCAGCTGGAAAATCAGCATTTCAg                                                                                       <  2:199685/142‑1 (MQ=255)                                              gagaAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATGAACACAGACCCAGCAGGAAAAGCAGGAATTCAGCTGCGCa                                                                                >  2:630604/1‑143 (MQ=255)                                                gaAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAgg                                                                              >  1:221107/1‑143 (MQ=255)                                                 aaaaGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGc                                                                             >  1:137448/1‑143 (MQ=255)                                                     gggAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCaaaa                                                                         >  2:744046/1‑143 (MQ=255)                                                     gggAAAGTGGGAGCGATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCaaaa                                                                         <  1:453875/143‑1 (MQ=255)                                                     gggAAAGGGGGAGCAAGGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCACCTGCCAGGGGCGTACGTACCCGCGAGGAATTACCGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCaaaa                                                                         <  1:463746/143‑1 (MQ=255)                                                      ggAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATCTCAGCGTCGCCCGCACAAg                                                                        >  1:754748/1‑143 (MQ=255)                                                            agggAGATATGATACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAAt                                                                  <  1:486292/142‑1 (MQ=255)                                                             gggCGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGACAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATc                                                                 <  1:508169/143‑1 (MQ=255)                                                              gaaGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACCCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGTATTAACGCAGTCCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCg                                                                <  2:292351/141‑1 (MQ=255)                                                                 gCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAGATCGata                                                             >  1:164733/1‑143 (MQ=255)                                                                    atgtaaaagagagAAAAGCAGAAGAGAAAAGAAGACGCCCCAGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc                                                          <  2:47082/136‑1 (MQ=255)                                                                      gACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAg                                                        <  1:682688/143‑1 (MQ=255)                                                                                   aaggagaggAGAAAATAAAACGCCCCTGCCAGCAGCTGACAGGGGCGTACGTACCCGAGAGGAATTACCGCAGACCCAACTACAACAACCGCAGTGCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCa                                           <  2:277026/143‑1 (MQ=255)                                                                                              aaaagaaaaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAGAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCGGt                                >  1:36669/1‑143 (MQ=255)                                                                                              aaaagaaaaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGt                                >  1:238270/1‑143 (MQ=255)                                                                                                gtacgtaCGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGa                              >  1:701594/7‑143 (MQ=255)                                                                                                    aaaCGGCCTTGCCTGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGAAAGt                          <  1:679460/143‑1 (MQ=255)                                                                                                        gCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGAAAGTCggg                      <  1:694501/143‑1 (MQ=255)                                                                                                                            ggggCGTACGTCCCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGAAAGTCGGGGTGATTTTGCAAGGTTCAGa  <  1:237137/143‑1 (MQ=255)                                                                                                                                   |                                                                                                                                        TGACCTGATCATAGTCTTAACCATTTTTTTACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCCAGGCGCACACCGTCAGACTCTTCAGTGAAAGTCGGGGTGATTTTGCAAGGTTCAGA  >  NC_000913/2460504‑2460769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.