New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2729405	32 (0.590)	7 (0.130)	6/272	5.7	19.5%	noncoding (40/76 nt)	gltW	tRNA‑Glu
	?	NC_000913	= 2729412	27 (0.520)					noncoding (33/76 nt)	gltW	tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2729259‑2729405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCAAAACAGACTGTTAAGTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGATCAAG  <  NC_000913/2729412‑2729272                                                                                                                                                                                                                                                                                                  TTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTAC                                                                                                                                                   >  1:583990/1‑143  TTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTCACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTACGGGATTCGAACCCCTGTTACC                                                                                                                                                  >  2:539793/1‑143  TTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACC                                                                                                                                                  >  1:205880/1‑143   TCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATAGTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCG                                                                                                                                                 <  1:434492/143‑1     gcTTTTCAGCTTGTTCCAGATTTTTAAAGCGCAAATATATCAAACAAGACTTAACAGTCCGTTGTGAGTTATTGATGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCTCTTGGGGATTCGAACCCCTGTTACCGCC                                                                                                                                               <  2:485320/141‑1     aagtcaCAGCTAGATCCAGATTTATAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCC                                                                                                                                               <  1:395273/137‑1                    CCAGATTTTTAGAGACCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCGCTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAA                                                                                                                                <  1:315868/143‑1                       GATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAACAG                                                                                                                             <  1:178242/143‑1                       GATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAACAG                                                                                                                             <  1:679752/143‑1                                                                                                    AAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAACA                                                                                                                              <  1:591340/65‑1                                                                                                    AAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCCTTTCACGGCGGTAACA                                                                                                                              >  2:591340/1‑65                                                                                                         AGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCC                                                                                                                                              <  1:957969/44‑1                                                                                                         AGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCC                                                                                                                                              >  2:957969/1‑44                                                                                                                                              caCGCCCCTTCCCGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGAACTCAATATCTCAAAACAGACTGTTAAGTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGAT      <  2:51461/141‑1                                                                                                                                                 GCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCAAAACAGACTGTTAAGTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGGTCAA   >  1:549489/1‑143                                                                                                                                                 GCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCAAAACAGACTGTTAAGTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGATCAA   <  1:471076/143‑1                                                                                                                                                  CCCTCTCCCCGCGCTAACAGTGGTTCGAACCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCAAAACAGACTGTTAAGTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGATCAAG  <  2:958162/143‑1                                                                                                                                                                                                                                                                                                  TTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2729259‑2729405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTCAATATCTCAAAACAGACTGTTAAGTCTTGTTTGATATATTTGCTCTTTAAAAATCTGGATCAAG  <  NC_000913/2729412‑2729272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.