| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 2 (0.040) | 41 (0.750) | 37/284 | 0.4 | 95.3% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 2 (0.040) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT > NC_000913/4001502‑4001785 | cAGTATGGATTGAGCTTGTCGAACCGGACGCCGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat < 1:180067/143‑1 (MQ=255) ggATTGATCTTGTCGAAGCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctt < 1:258140‑M1/143‑7 (MQ=255) tGATCTTGTCGACCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttc < 1:599640‑M1/143‑11 (MQ=255) ggggcttggCGGACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACGGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttc < 2:300972‑M1/139‑11 (MQ=255) tggtcGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt < 1:34156‑M1/141‑16 (MQ=255) cGAACCGGACGACGACGAGCGACTGCGCGTACAAGCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:547771‑M1/143‑20 (MQ=255) cGGACGAGCACGAGAGACTGAGGGTACGACCTGAACATGGCCGGAGCCTGGCAACCGGCCAGGAACTGGAAGACATCGAAGCATCGGCAAGTTTCTTTGCAGACAACGACAGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGc < 2:441545/143‑1 (MQ=255) cgacgtcgaTCGACTGCTCGTATATTCTGAACTTGGCCAGAGCCTGGTAACCCGCCCGTAATTGGAATACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGTCTGTATcttctttttcttctttgaagatgcggaa < 2:771635‑M1/143‑29 (MQ=255) gggcgcgtgcgcgtgGAGTCTGCACTTGGCGGGCGCCTGGCACCCCGCCCGGAAGTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg < 2:676304‑M1/136‑36 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGGTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaggatgcggaagatcacg > 1:385694‑M1/1‑108 (MQ=255) cgcGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgc < 2:710970‑M1/142‑37 (MQ=255) aCTGCGCTTACAACCTCACCTTGTCTAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGTAGCATCGGCACGTTTCTTTGAAGACGACGACTGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggt < 1:495088‑M1/143‑41 (MQ=255) tGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa < 1:848957‑M1/143‑43 (MQ=255) gcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGGCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATcgccttcgtcatctttgacggtgcggaagatcacgccgcgaaccg > 2:800164‑M1/1‑98 (MQ=255) ctcTGAACTTGGCCAGAGCCTGGCAACCCGCCCTGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:204152‑M1/142‑53 (MQ=255) aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:734285‑M1/143‑53 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGGAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtagctccatcgtgg > 1:98927‑M1/1‑90 (MQ=255) cTGAACTGGGCCAGAGCCTGCCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCGTTGAAGACGACGACGGCCTGCATctccttctccttctttgaagatgcggaagatcacgccggtaactccactgtggc < 1:650006‑M1/143‑55 (MQ=255) ttGGCCAGAGCCTGGCAACCGGGCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac < 2:157086‑M1/143‑61 (MQ=255) gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATccccttcttcttctttgaagatgcggaaggtcacgccggtaactccactgtggcatgtacaat > 2:700305‑M1/1‑80 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcc > 1:478348‑M1/1‑78 (MQ=255) ccccggcaacCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 1:975939‑M1/139‑70 (MQ=255) aaCCCGCACGCAACGGGACGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt < 2:768097‑M1/143‑77 (MQ=255) cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 1:704007‑M1/143‑79 (MQ=255) cttcaactggAAGACATCGACGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagctcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 1:79172‑M1/139‑84 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtcatggtcgtctgttta > 2:934247‑M1/1‑60 (MQ=255) aaGACCTCGAAGCATCGGCACGTTTCTTTCAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga < 1:117337‑M1/143‑94 (MQ=255) gggcATCGATGCCTCGGCGCTTTTGTTGGACGACGACGCCGGCCTGCAT‑‑‑‑‑CTCCTTCGTCTTCTTTGAGGATGCGGCAGTTCACGCCGGTAACTCCACTGTGGCAGTTACCATCCGTGATGGTCGTCTATTTACTCTgcgtgag < 2:836628/140‑1 (MQ=255) aGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactagaatgtggcattgaccatccgtgatggtcgtcggtttactctgcgtgag > 1:222235‑M1/1‑49 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc > 1:77996‑M1/1‑48 (MQ=255) cATCGAAGCATCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 1:199238‑M1/143‑98 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg > 1:839935‑M1/1‑45 (MQ=255) cGAAGCATCGGCACGTTTCTTTGACGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattgaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:130211‑M1/143‑101 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt < 1:893524‑M1/143‑111 (MQ=255) gCACGTGTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt < 1:313519‑M1/143‑111 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttgtttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcggtggtgctcgtctgtttactctgcgtgagcgtgtcctgtccgcttttggtctgt > 1:373340‑M1/1‑24 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgacctgcccgcttctcgtctgt > 1:960248‑M1/1‑24 (MQ=255) tttaagacGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgta < 1:961218‑M1/140‑121 (MQ=255) gacgacgacGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta < 2:77996‑M1/143‑126 (MQ=255) ccTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgcactgcccgcttttcgtctgtatcgtatgcgtgcccgt > 1:517346‑M1/1‑7 (MQ=255) cTGCATctcctgcttctgctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgggcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgta < 2:760270‑M1/143‑138 (MQ=255) tGCATcttcttcttcttcttttgacatgcggcagttcacgcctgtatctccactgtggcatttaccatccgtgatggtcgtctgtttcctctgcgtgagcgtgacctgcccgcttttcgtctgtatcgtatgcgtgcccgtag < 2:674730‑M1/143‑139 (MQ=255) gCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgcctgtatcgtatgcgtgcccgtagc > 1:213682‑M1/1‑4 (MQ=255) aTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtctcgtatgcgtgcccgtagccc > 1:590604‑M1/1‑2 (MQ=255) | CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT > NC_000913/4001502‑4001785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |