New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4556943	64 (1.170)	5 (0.090)	5/274	6.2	7.8%	intergenic (‑623/‑50)	yjiC/iraD	uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor
	?	NC_000913	= 4556951	56 (1.060)					intergenic (‑631/‑42)	yjiC/iraD	uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAC  >  NC_000913/4556802‑4557084                                                                                                                                              |                                                                                                                                              tttCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTCTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCg                                                                                                                                              <  1:127495/143‑1 (MQ=255)      tGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCCATACAGTGGTGCCAGGTGtt                                                                                                                                         >  2:93806/1‑143 (MQ=255)      tGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGtt                                                                                                                                         >  1:638323/1‑143 (MQ=255)        aagagccAGTAAATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCa                                                                                                                                       <  2:582839/137‑1 (MQ=255)        aaaaGTCAGTATATATTCATAGGCAAGTAAGGTTTTATACTCTGCTGACCGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCa                                                                                                                                       <  1:690430/143‑1 (MQ=255)        aaaaGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCa                                                                                                                                       <  1:813268/143‑1 (MQ=255)        aaaaGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCa                                                                                                                                       <  2:774759/143‑1 (MQ=255)         agaGTGAGCAGATATACATAGGCAAGTAAGGTTTTATAGTTTGCTGACAGGATTCAGGGCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAg                                                                                                                                      <  1:688639/141‑1 (MQ=255)          aaGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTccgc                                                                                                                                     >  1:696580/1‑140 (MQ=255)              cAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCCGGGCaa                                                                                                                                 >  1:585856/1‑143 (MQ=255)               aGTAGATATTCAAAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACCTGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAg                                                                                                                                <  1:518298/143‑1 (MQ=255)                  aGATAATCATAGGCAAGTAAGGTCTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTCACATGGAAGCAATGAACCAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGATGCCCGGTGGCCAgggacagacg                                                                                                                             >  2:843244/1‑136 (MQ=255)                           tacgCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTg                                                                                                                    <  1:606870/140‑1 (MQ=255)                           tAGGCCAGTAAGGTTTTATTCTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTg                                                                                                                    <  2:694456/143‑1 (MQ=255)                                   tAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGATCAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATAAGTTGCTCAACgc                                                                                                            >  2:850786/1‑142 (MQ=255)                                   tAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGATGCTAAACGt                                                                                                            >  2:342603/1‑143 (MQ=255)                                     aGGTTTTATACTTAGCTGACAGGATTCAGGCCTGTAGCAGACGGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCAGCAACACAGTCGTGCCCGGGGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCa                                                                                                          <  2:542143/143‑1 (MQ=255)                                        ttttATAATTTGCTGACAGGATGCAGGCCTGGCTCAGACTGACAAGGATGGAATGAACAAAAGGGAATGGCTATGGAAAATGAGCAGCAATACAGGGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGa                                                                                                       <  1:196814/143‑1 (MQ=255)                                         tttATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGCTCAGGGCAAGCCGCATATGGTGCTGAGCGTCGGGAg                                                                                                      >  2:784006/1‑143 (MQ=255)                                                tttGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCaa                                                                                               >  1:509516/1‑143 (MQ=255)                                                     tGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAatga                                                                                          >  1:108132/1‑143 (MQ=255)                                                      gACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAatgat                                                                                         <  1:187132/143‑1 (MQ=255)                                                       aCAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAAGGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAatgatg                                                                                        <  1:423367/143‑1 (MQ=255)                                                        cAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGc                                                                                       >  1:708091/1‑143 (MQ=255)                                                         aGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGTTAACCGTCAGGAGTGCGCAAAATGATGCg                                                                                      >  2:796259/1‑143 (MQ=255)                                                         aGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCg                                                                                      >  1:652169/1‑143 (MQ=255)                                                                aGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCACAATGACGCGACAATCa                                                                               >  1:711828/1‑143 (MQ=255)                                                                        ctcAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATGACTTCAGGc                                                                       <  2:952504/143‑1 (MQ=255)                                                                           aGACTGACACGGACGAAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGt                                                                    <  1:612344/143‑1 (MQ=255)                                                                              cTGACATGGATGTAATGAATAAAATGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGattt                                                                 <  2:642165/143‑1 (MQ=255)                                                                                gACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCACCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTAc                                                               >  1:587960/1‑143 (MQ=255)                                                                                  cATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCt                                                             <  1:636826/143‑1 (MQ=255)                                                                                   aTGGATGTAATGAACAAAAGGGAATGGCTATGGAACATGCGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCACAAATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTg                                                            >  1:564973/1‑143 (MQ=255)                                                                                    tGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGa                                                           <  1:946141/143‑1 (MQ=255)                                                                                       aTGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACCTCAGCGGTGCGCAAAATGATGCGACAATCCCTTCAAGCTGCTTTAccccaaac                                                        >  2:63846/1‑137 (MQ=255)                                                                                          tAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTc                                                     <  1:484479/143‑1 (MQ=255)                                                                                          tAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTAAGGAAAAGCCGCATATGTTGCTAAACGTCAGGAGAGCGCCAAATGATGCGACAATCACTTCATGCTGTTTTACCCGAACTTTc                                                     >  2:618064/1‑143 (MQ=255)                                                                                           aaTGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAACATGATGAGTAAATCACTTCAGGCTGTTTTACCTGAAATTTCa                                                    <  1:732088/143‑1 (MQ=255)                                                                                           aaTGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCa                                                    <  2:880082/143‑1 (MQ=255)                                                                                           aaTGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCa                                                    <  1:432800/143‑1 (MQ=255)                                                                                           aaTGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGAGCCCGGAGTTTGTCGCAGGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCa                                                    <  1:723464/143‑1 (MQ=255)                                                                                            aTGAACAAAAGGGAATGGCTATGGAAAATGAGCATCGATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAg                                                   <  1:481724/143‑1 (MQ=255)                                                                                             tGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGGGGTGCCGGGTGTTCGGGGCAAGCCGCATATGTTGCTAAGGGTCAGGAGTGGGCAAAAGGATGCGACGATCACAGCAGGATGGTTGACTGGAAAtagacag                                                  >  2:721306/1‑137 (MQ=255)                                                                                                  aaaaGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCGGGTGTTCAGGGCAAGCCGCAGATGTTGCTAAACGTCAGGAGTGCGCAAAAGGATGCGACAATCACTTCAGGCTCTTTTACCTGAAATTTAAGGCaaga                                             >  2:94546/1‑141 (MQ=255)                                                                                                    aaGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATaaa                                           <  1:916718/143‑1 (MQ=255)                                                                                                      gggAATGTCTATGGAAACTGAGCACCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAAc                                         <  1:534989/143‑1 (MQ=255)                                                                                                          tgggCTATGGAAAATGAGCATCAACACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAATCACCAGCAGTGCGCAACATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCa                                     <  1:567665/141‑1 (MQ=255)                                                                                                          aTGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCa                                     <  2:938251/143‑1 (MQ=255)                                                                                                             gcgaTGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTGCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCg                                  <  2:931638/140‑1 (MQ=255)                                                                                                             gCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCg                                  <  1:977158/143‑1 (MQ=255)                                                                                                               tATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCGTCGCt                                >  2:512404/1‑143 (MQ=255)                                                                                                                 tGGAAAATGAGCCTCAATGCAGTGGTGCCCGGTGTGCAGGGCAAGCCGCATATGTTGCTAAACGTCAGCAGTGCGCAAAATGATGCGACAATCACTTCCGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGc                              <  1:504076/143‑1 (MQ=255)                                                                                                                 tGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGGATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATCAAACGTCATCGCTga                              >  1:373309/1‑142 (MQ=255)                                                                                                                  ggAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGAGAATCACTCCAGGCTGTTTTACCTGAAATATCAGGCAATAAAAAGTCAACGcgcca                             >  2:282424/1‑139 (MQ=255)                                                                                                                     aaaTGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTaa                          >  1:107823/1‑143 (MQ=255)                                                                                                                         gAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCg                      <  2:803487/143‑1 (MQ=255)                                                                                                                             aTCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTag                  >  1:474271/1‑142 (MQ=255)                                                                                                                              tCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTATCTCGGTATg                 >  1:356583/1‑143 (MQ=255)                                                                                                                              tCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATg                 >  1:827340/1‑143 (MQ=255)                                                                                                                                     aggggtgCCCGGTGTTCAGGGCAAGCCGCATATGTGGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAt          <  1:358376/140‑1 (MQ=255)                                                                                                                                     aGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGCCAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAt          <  1:244776/143‑1 (MQ=255)                                                                                                                                     aGTGGTGCCCGGTGCTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGGCATCGCTGCGTAAATCGGTATGCAGCgct          >  2:633395/1‑141 (MQ=255)                                                                                                                                            cccGGTGTTCAGGGCAAGCCGCATATGTCGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCa   >  2:262612/1‑143 (MQ=255)                                                                                                                                             ccGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAc  >  1:596811/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                              TTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGTAATGAACAAAAGGGAATGGCTATGGAAAATGAGCATCAATACAGTGGTGCCCGGTGTTCAGGGCAAGCCGCATATGTTGCTAAACGTCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAC  >  NC_000913/4556802‑4557084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.