New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2729405	32 (0.590)	7 (0.130)	6/272	5.7	19.5%	noncoding (40/76 nt)	gltW	tRNA‑Glu
	?	NC_000913	4168404 =	27 (0.520)					noncoding (33/76 nt)	gltT	tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGC  >  NC_000913/4168292‑4168545                                                                                                                 |                                                                                                                                              taagaatgCCGTTCGCTTTCTATGAAGCACAGCGTCCCCTACACGAAAATATCACGCAACGCGTGATAAGCGATTTTCGTGTCCCCCTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATccc                                                                                                                 <  2:586889/136‑1 (MQ=1)                           tgcaaGCTCCCCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTtgt                                                                                       <  1:507628/140‑1 (MQ=1)                               agatCACACTACACTATAATATCACGTAACGTGTGATAAGTACTTTGTGTATCCCCTGCGTCTAGAGGGCCAGGACACCGGCCGTGCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtgagt                                                                                   <  1:663543/140‑1 (MQ=1)                                                aaTAGCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTa                                                                  <  1:99613/143‑1 (MQ=14)                                                     cACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACTGGGGTTCCAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATAtc                                                             <  1:940468/143‑1 (MQ=17)                                                      aCGCAACGCGTGACAAGCCATTTTCGTGTCCCCTTCGCCCAGCGGCCCAGGACACCGCCCTTTCACGGCGGTACCAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAATTCGCCGACCTTAATAtct                                                            <  1:192264/143‑1 (MQ=11)                                                       cGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATAtctc                                                           <  1:430644/143‑1 (MQ=32)                                                        gCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCAACCTTAATATCTCa                                                          >  2:624299/1‑143 (MQ=17)                                                                 gATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATACCACATAGCTCATc                                                 >  2:152083/1‑143 (MQ=255)                                                                    aaGCAATTCTCGTGTCCCCGGCGTCTAGAGGCCCATGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGTGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTc                                              <  2:414049/143‑1 (MQ=14)                                                                     aGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCg                                             <  2:178015/143‑1 (MQ=39)                                                                        aaTTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGt                                          <  1:435183/143‑1 (MQ=255)                                                                         aTTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTg                                         >  2:363187/1‑143 (MQ=255)                                                                               gtgtCCCCTGCGTCTAGGGGCCCAGGGCACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt                                   <  2:327684/143‑1 (MQ=255)                                                                               gtggCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGCAAGTCGCCAACCTTAATATCTCAAAACGCATCTTCGGGTGATGttt                                   <  1:188476/143‑1 (MQ=255)                                                                               gtctCCCCTTCGTCCAGAGGCCCAGGCCACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGCCGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGttt                                   <  2:3404/140‑1 (MQ=255)                                                                                    cccTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGat                              >  1:991476/1‑143 (MQ=37)                                                                                    cccTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGAGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAACACTCATCTTCGGGTGCTGTTTGCGat                              >  1:947315/1‑143 (MQ=255)                                                                                      cTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGatat                            >  1:872085/1‑143 (MQ=38)                                                                                       ttCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATAtt                           >  1:937372/1‑143 (MQ=39)                                                                                       tccGTCTGGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTTAAAACTCATCTTCGGGTGATGTTTGAGATAtt                           <  2:515003/141‑1 (MQ=255)                                                                                           tCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGct                       >  1:41965/1‑143 (MQ=38)                                                                                           tCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGAGGACGCCACGTGCTCGTTTGTGAGTGAAAGTCGCAGACCTTAATATCTCAAAACTCATCGTGGTGTGATGTTTAACATATTTGct                       >  2:309789/1‑143 (MQ=11)                                                                                               gagGCCCAGGACACCGCCCTTTAACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGGTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGGGATATTTGCTCttt                   >  1:913350/1‑143 (MQ=255)                                                                                                agGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTa                  <  2:210480/143‑1 (MQ=38)                                                                                                     cAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAAt             >  1:710706/1‑143 (MQ=39)                                                                                                        gACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTg          <  1:862826/143‑1 (MQ=38)                                                                                                            cctcccTTTCACGGCGGTAACAGTGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATc      <  1:711729/140‑1 (MQ=255)                                                                                                               cccTTTCGCGGCGGTACCAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGTGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAg   <  2:868174/143‑1 (MQ=255)                                                                                                               cccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGAGAGTGAAACTCGCCGACCTTAATATCTCAACACTCATCTTCGGGTGATGTTTGAGACATTTGCTCTTTAAAAATATGAATCAAg   >  1:386459/1‑143 (MQ=11)                                                                                                                ccTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGc  >  1:972283/1‑143 (MQ=38)                                                                                                                 |                                                                                                                                              GAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCGCCGACCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGC  >  NC_000913/4168292‑4168545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.