New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4168398 =27 (0.490)8 (0.150) 7/272 5.2 23.6% noncoding (27/76 nt) gltT tRNA‑Glu
?NC_000913 4209819 = NA (NA)noncoding (46/76 nt) gltV tRNA‑Glu
Rejected: Coverage evenness skew score above cutoff.

TCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCT  >  NC_000913/4209678‑4209877
                                                                                                                                             |                                                          
tCACCTCCTTACCGTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGAAAGGAGACTTGCGAAGCAGACTGATACGTACCCTTAGTAGAGAGGCCCAGCAAAGAAACCATTCACGGCAGTaa                                                           >  2:385838/1‑143 (MQ=11)
    ctcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGCAACAgg                                                       >  2:424519/1‑143 (MQ=17)
     tcctTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTATAGAGGCCCACGACACCGCCCTTTCACGGCGGTAACAggg                                                      >  1:673290/1‑143 (MQ=17)
       cttaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt                                                    >  2:154444/1‑143 (MQ=32)
       ctgaccttaAAGAAGCGTTCTTTGCAGTGCTCACACAGGTTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGt                                                    <  2:180327/140‑1 (MQ=17)
         ttccttaAAGAAGCGTGCTTTGCCGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc                                                  <  2:827236/141‑1 (MQ=12)
         gagctgaaaGGAGCGTTGGGTGCAGTGCGCACACGGAGTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCTCTTCGTCTGGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTc                                                  <  1:437444/137‑1 (MQ=11)
            cgtaAAGAAGCGTTCTTTGCTGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAATGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGaa                                               <  2:900232/141‑1 (MQ=12)
             ttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCATTCACGGCGGTAACAGGAGCTCGAAt                                              >  2:774040/1‑143 (MQ=12)
             ttaAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCATTTCACGGCGGTAACAGGGGTCCGAAt                                              >  2:191375/1‑143 (MQ=17)
              taAAGAAGCGTTCTGTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc                                             <  1:52770/143‑1 (MQ=17)
                 agaagCGTTCCTTACAGGGCTCACACAGATTGTCTGATAGAAAGTGAAACGCAAGGCGTCTTGCGAAGCAGACTGCTACGTCCCCTTCGTCTAGAGGCCTAGGATACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATcccc                                          <  2:402014/143‑1 (MQ=11)
                   aagCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGGATCCCCTa                                        >  1:162703/1‑143 (MQ=17)
                   aagCGTTCTTTGCAGTGCGCCCACAGATTGTGTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTa                                        <  2:237860/143‑1 (MQ=12)
                    cgCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTTAAATGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAg                                       <  1:736422/142‑1 (MQ=17)
                    agCGTTCTTGGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAAATCACTTTCCTTGCACGGCGGTAACAGGGGTTCGAATCCCCTAg                                       <  1:944543/143‑1 (MQ=11)
                     gCGTTCTTTGCAGTGCTCACACAGATTGTCTGCTAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTACCGGCGGTAACACGGGTTCGAATCCCCCAgg                                      >  2:517425/1‑143 (MQ=11)
                         tCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGAc                                  >  2:963473/1‑143 (MQ=32)
                           tttGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGGTCGAATCCCCTAGGGGACGc                                >  1:833129/1‑143 (MQ=17)
                              gCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGAGACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCAc                             <  1:35835/143‑1 (MQ=17)
                              gCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCAc                             >  1:757962/1‑143 (MQ=32)
                                aGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACtt                           >  1:848422/1‑143 (MQ=32)
                                     tCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGATCGAATCCCCTAGGGGACGCCACGTGCCgg                      >  2:586908/1‑143 (MQ=12)
                                       acacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGTGACGCCACTTGCTGGtt                    >  1:389951/1‑143 (MQ=17)
                                        cacaGGTTGTCTGACAGACAGTGAAAGGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGttt                   <  2:561568/143‑1 (MQ=255)
                                        cacaGATTGTCTGATAGAAAGTGAAAAGCGAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTATAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGttt                   <  1:297692/143‑1 (MQ=17)
                                        cacaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGttt                   >  2:863653/1‑143 (MQ=32)
                                         acaGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTtg                  >  2:364757/1‑143 (MQ=32)
                                            gcttcgcTGATAGAAAGTGAAAATCAAGGCGGCTTGCGCCGCCGACTTACACGTCCCCTTCGTCTAGAGGCCCACGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtga               <  1:981459/137‑1 (MQ=11)
                                            gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtga               >  1:867409/1‑143 (MQ=32)
                                            gATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtga               >  1:487377/1‑143 (MQ=32)
                                              ttGTCTGATTGAGAGTCAAAAGCAAGGCGTCTTGCGCAGCAGACTGATCCGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTgtgagt             <  2:606503/143‑1 (MQ=11)
                                                 tCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGaa          <  1:938638/143‑1 (MQ=32)
                                                   tGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAg        >  2:654818/1‑143 (MQ=32)
                                                    gATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAACCCCCTAGGGGACGCCACTTGCTGGTTCGCGAGGGAAAGt       >  2:664158/1‑143 (MQ=255)
                                                     gtAGAAAGTGAAAAGCCAGGCGTCTTGCGAAGCAGACTGATACGTCCCATTAGTCTAGAGTCTCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTc      <  2:592951/142‑1 (MQ=11)
                                                      tAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCa     <  1:918157/143‑1 (MQ=32)
                                                       aGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCAGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGGTTGTGAGTGAAAGCCAc    >  2:484864/1‑143 (MQ=12)
                                                        gAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCAcc   >  1:67870/1‑143 (MQ=31)
                                                         aaaGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCt  >  2:815516/1‑143 (MQ=11)
                                                                                                                                             |                                                          
TCACCTCCTTACCTTAAAGAAGCGTTCTTTGCAGTGCTCACACAGATTGTCTGATAGAAAGTGAAAAGCAAGGCGTCTTGCGAAGCAGACTGATACGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCT  >  NC_000913/4209678‑4209877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.