Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)30 (0.810) 27/284 0.4 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)41 (1.100) 32/284 0.2 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

ATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGG  >  NC_000913/1292891‑1293171
                                                                                                                                             |                                                                                                                                           
cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacctt                                                                                                                                            <  2:385645‑M1/2‑1 (MQ=255)
aTGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCCATAGCCAGGAATGTAAGGAATTCAACCTTGTTCTTTCtttt                                                                                                                                            >  1:509528/1‑143 (MQ=255)
  gttgttCAGAATTTTAAGTGCTTCGCTTATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgt                                                                                                                                          <  1:248197/143‑1 (MQ=255)
    gatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaagactccatcatacactaaatcagtaagttggcagcattaccttattc                                                                                                                                        <  1:162048‑M1/6‑5 (MQ=255)
       tCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGg                                                                                                                                     >  2:355407‑M2/1‑142 (MQ=255)
        tccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagacacagaagccactggagcccctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgcc                                                                                                                                    <  2:561729‑M1/10‑1 (MQ=255)
        tccggcgggcctggtgccgttacgcaccaccccgtcagtagctgaacaggagggacagcggatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgcc                                                                                                                                    >  2:331181‑M1/134‑143 (MQ=255)
         aGAATTTTAAGTGCTTCGCTCATTGTAGTTATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                   <  1:96881‑M2/143‑4 (MQ=255)
         aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                   <  2:412785‑M2/143‑4 (MQ=255)
          cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaa                                                                                                                                  <  2:447026‑M1/12‑1 (MQ=255)
            aTTTTAAGTGCTTCGCTCATTGTAGTAATCGCAAACGTATATTGGGGGGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCATTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                >  1:479449‑M2/1‑137 (MQ=255)
                 gcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtcagttggcagcatcaccCGGTGCCGCCAATAAatat                                                                                                                           <  1:245979‑M1/19‑1 (MQ=255)
                 aaGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactc                                                                                                                           >  1:103747‑M2/1‑132 (MQ=255)
                   ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCt                                                                                                                         <  1:331033‑M1/21‑1 (MQ=255)
                   gTGCTTCGCTCACTGTAGTAATATCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcca                                                                                                                         >  2:155453‑M2/1‑130 (MQ=255)
                        tCGCTCATTGTAGTAATCTCAAACTTATATTGGGTTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactta                                                                                                                    >  1:189314‑M2/1‑125 (MQ=255)
                         cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                   >  1:102082‑M2/1‑124 (MQ=255)
                         cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGCTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTTAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                   >  1:92200‑M2/1‑124 (MQ=255)
                          gCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATATAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatt                                                                                                                  >  2:75016‑M2/1‑123 (MQ=255)
                           tggcgcaccgcgccgtcagtagctgaaccggagggacagctgagagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaa                                                                                                                 >  1:132345‑M1/115‑143 (MQ=255)
                           cTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattg                                                                                                                 <  1:476008‑M2/143‑22 (MQ=255)
                             acgccccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                                                               >  2:88058‑M1/113‑143 (MQ=255)
                                   caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGcc                                                                                                         <  2:376618‑M1/37‑1 (MQ=255)
                                    gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTCAATTACGAGGCGggtaatgactccaacttattgatagtgttt                                                                                                        <  2:473090‑M2/143‑31 (MQ=255)
                                        tctcAAACTTATATTGGGGTGGTCTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatg                                                                                                    >  1:253566‑M2/1‑109 (MQ=255)
                                          tcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccagcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAg                                                                                                  <  1:493173‑M1/44‑1 (MQ=255)
                                          tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                  <  2:466456‑M2/143‑37 (MQ=255)
                                               agctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgcg                                                                                             >  1:443501‑M1/95‑143 (MQ=255)
                                                   tgaacaggagggacagctgatagaaacagaagccactggagcaccccaaaaacaccatcatacactaaatcagtaagtcggcagcatcacTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCCGAAAAGACGCGGCat                                                                                         <  1:656164‑M1/53‑1 (MQ=255)
                                                    aacaggagggacagctgatagaaacagaagcgactgaagcatctcaaaaacaccggcatacgctaaagcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTGCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                        >  1:604839‑M1/90‑143 (MQ=255)
                                                         gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGcc                                                                                   >  2:203811‑M1/85‑143 (MQ=255)
                                                           gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATCGCCCt                                                                                 <  2:97714‑M1/61‑1 (MQ=255)
                                                               cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAttt                                                                             >  1:656623‑M1/79‑143 (MQ=255)
                                                               cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAttt                                                                             <  2:277489‑M1/65‑1 (MQ=255)
                                                                  ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAACAAATATCTTTTCATAAAATTAGCAAGAAACGACGCGGCTTATagccctaatatca                                                                          <  1:631446‑M1/68‑7 (MQ=255)
                                                                  ctgatagaaacagaagccactggagcacctcaaaaacaccataatacactaaatcagaacgttggcagcatcaccTTGTGCCGCCAATAAATATACTTTCATAAAATTAGCCAGAAACGACGCGGCATATAGCCCTATTTaca                                                                          <  2:674253‑M1/68‑1 (MQ=255)
                                                                   tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                         >  1:348298‑M1/75‑143 (MQ=255)
                                                                   tgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgataatgttctatgttccgataatcgccgatgactttgtca                                                                         <  2:334782‑M2/143‑62 (MQ=255)
                                                                   tgAGGTAATAATAGAGCCTTAAATTCAGTCGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                         >  1:521347‑M2/1‑82 (MQ=255)
                                                                    gAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataattcccgatgactttgtcat                                                                        <  1:623919‑M2/143‑63 (MQ=255)
                                                                       gTAATAATTGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                     >  2:345949‑M2/1‑78 (MQ=255)
                                                                       agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCGATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgat                                                                     >  1:660216‑M1/71‑143 (MQ=255)
                                                                         aaacagaagccactggagcccctcaaaaacaccatcatacactaaaccagtaagctggcagcctcaccTTGTCCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAAATACCCCTATTTACACCcatga                                                                   <  2:207746‑M1/75‑1 (MQ=255)
                                                                         aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatga                                                                   <  2:491842‑M1/75‑1 (MQ=255)
                                                                                  gCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatcgtgcgttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                          >  2:658079‑M2/1‑67 (MQ=255)
                                                                                   ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAACATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatcgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                                                         <  2:105777‑M2/143‑78 (MQ=255)
                                                                                   cactgcaccacctcaaacacaccatcatacaccacatcagtaggttggcagcagcaccTTGGGCCGCCAATAAAGATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagca                                                         >  1:475149‑M1/59‑143 (MQ=255)
                                                                                       aaaTTCGGTTGTGCAATAGCCAGGAATGTAAGGAATTCAGAATTGTTCTTTATTGTGTGCCGggtaatgcctccaacttattgatagtgttttattttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                     >  2:166728‑M2/1‑62 (MQ=255)
                                                                                       aaaTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacgttgtcatgcagctccaccgattttga                                                     <  2:606629‑M2/143‑82 (MQ=255)
                                                                                        gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCAAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGa                                                    <  2:51072‑M1/90‑1 (MQ=255)
                                                                                         agcccctcagacacaccatcatacgctaactcagaaagttgggagcatcacgTTGTGCCGCCAATAAATAGCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAg                                                   >  1:56791‑M1/53‑143 (MQ=255)
                                                                                              gTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctacaccgattttgagaacgac                                              <  1:442998‑M2/143‑89 (MQ=255)
                                                                                                    aacaccctcatacagtaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                        >  2:461157‑M1/42‑143 (MQ=255)
                                                                                                     acaccattatccacgaatccagtcagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTcc                                       >  2:174431‑M1/41‑143 (MQ=255)
                                                                                                       accatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTg                                     <  1:275811‑M1/105‑1 (MQ=255)
                                                                                                         gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccg                                   >  2:554470‑M2/1‑44 (MQ=255)
                                                                                                         catcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAt                                   <  1:578289‑M1/107‑1 (MQ=255)
                                                                                                             atacactaaatcagtaaggtggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCAt                               >  2:463848‑M1/33‑143 (MQ=255)
                                                                                                                 actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACATCGATGATTTCGCAGCACGCGATGTTATAACTTCCTGATTCATGTca                           <  1:248267‑M1/115‑1 (MQ=255)
                                                                                                                 actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTACAACTTCCTGATTCATGtcc                           <  1:556764‑M1/115‑2 (MQ=255)
                                                                                                                 actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca                           <  1:330964‑M1/115‑1 (MQ=255)
                                                                                                                 actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATATACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCACGtcg                           <  1:229898‑M1/115‑2 (MQ=255)
                                                                                                                   gaagGAATTCAAAATTGGTCTGTATGTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                         >  1:81779‑M2/2‑34 (MQ=255)
                                                                                                                         agtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTACAACTTCATGGTTCATATTACATTGTAt                   <  1:217073‑M1/123‑1 (MQ=255)
                                                                                                                          ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatattgataacgacaccgacttccgtccaagccgtgccagct                  <  2:341980‑M2/143‑117 (MQ=255)
                                                                                                                              aaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctg              <  2:582265‑M2/143‑121 (MQ=255)
                                                                                                                               ttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGATAAAACTTCCTGATTCATGTCACATTAtatgggaag             <  2:254382‑M1/129‑4 (MQ=255)
                                                                                                                                tggcagcatcaccTTGTGCCGCCTATAAAAACGTGTTCATAAAAGTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgaga            >  1:117463‑M1/14‑143 (MQ=255)
                                                                                                                                     gcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc       >  2:496358‑M1/9‑143 (MQ=255)
                                                                                                                                     gcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc       >  1:491842‑M1/9‑143 (MQ=255)
                                                                                                                                          aTCTTGTGCTGgttaatgtctccaccttgttgatagtgttttatgtccctctaatgctcgatgacgttgtcatgcagctccaccgattttgtgaacgacagcgacttccgtcccagccgtgccaggtgctgcttcagattcag  >  2:37919‑M2/1‑11 (MQ=255)
                                                                                                                                             |                                                                                                                                           
ATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGG  >  NC_000913/1292891‑1293171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.