New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4317917 =NA (NA)5 (0.070) 5/268 10.0 NA noncoding (1/83 nt) REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4317949 = NA (NA)noncoding (33/83 nt) REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences REP323 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.

TGAGCGAGGCGCGATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTCC  >  NC_000913/4317808‑4318090
                                                                                                                                             |                                                                                                                                              
tGAGCGAGGCGCGATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCt                                                                                                                                               <  1:755187/143‑1 (MQ=255)
    cGAGGCGCGATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACgg                                                                                                                                          >  2:34093/1‑143 (MQ=255)
     gAGGCGTGAGTGCGGACGGGCAGGCGCACGACGTTTTGGTGGGGCAGGATGAAGGTTTTACTGGCGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACggg                                                                                                                                         <  2:1042485/143‑1 (MQ=38)
      aGGCGCGATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGGCGGATGCGACGCTGACGCGTCTTATCCGACCGACgggg                                                                                                                                        >  2:449557/1‑143 (MQ=255)
       ggCGCGATTGAGGACGGGCAGGCGCACGCAGTATTGCTGGTGCAGGGTGAAGGTTCCGCCGACGAAATACAAGGGTATCTTTTTTCGCCTCGGGGTTCGGGTGGCGGCTGCGACGCTGACGCGGCTTGTCCGGCCTAGCgggg                                                                                                                                        >  2:935987/1‑143 (MQ=255)
        gcggGAGTGAGTGCGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAg                                                                                                                                      <  2:760527/143‑1 (MQ=255)
        gcgcGGTTGAGGACGGGCAGGCGCACGCCGTTTTGCTCATGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAg                                                                                                                                      <  2:1276425/143‑1 (MQ=255)
          gcgATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCGGACCTACggggggag                                                                                                                                    >  1:754026/1‑139 (MQ=255)
          gcgATTGAGGACCGGCACGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGCTTCGGGCGTCGCATGCGCCGCTGCCGCGTCTTCTCCCACCTCCggtccgcg                                                                                                                                    >  2:1119280/1‑137 (MQ=255)
            gATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTACTCATTTTTCGCCTCGTGGTTCGGGTGTCGGCTGCGACGCTGACACGTCTTATCCGACCAACCGAGAGCGCa                                                                                                                                  >  1:621255/1‑143 (MQ=255)
              ttGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCAtt                                                                                                                                >  1:832060/1‑143 (MQ=255)
               tggggACGGGCAGGCGGACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCAttt                                                                                                                               <  1:912107/140‑1 (MQ=255)
                  ggACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTa                                                                                                                            <  1:1181364/143‑1 (MQ=255)
                  ggACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTa                                                                                                                            <  1:681900/143‑1 (MQ=255)
                  ggACGGCCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTa                                                                                                                            <  1:26489/143‑1 (MQ=255)
                   gccGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAg                                                                                                                           <  2:27581/141‑1 (MQ=255)
                   gACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAg                                                                                                                           >  1:732824/1‑143 (MQ=255)
                      gggCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCCTTTGTCGGcc                                                                                                                        >  1:310508/1‑143 (MQ=255)
                      gggCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGcc                                                                                                                        >  2:735564/1‑143 (MQ=255)
                       ggcgggcgCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCg                                                                                                                       <  2:663957/143‑1 (MQ=255)
                        gCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGTTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCgg                                                                                                                      >  2:649630/1‑143 (MQ=255)
                          aGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTGCTGACGTGTTGTACGTTAAGCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGAt                                                                                                                    <  2:520008/143‑1 (MQ=255)
                            gcgcACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGGCGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGGTaa                                                                                                                  >  2:1088063/1‑143 (MQ=255)
                            gagcAGGCCGTTGTGCTGGTGCAGGATGAAGGTTGTACTGACGTTTGGTACGTTAATCAGTGTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGCATaa                                                                                                                  <  1:1057176/141‑1 (MQ=37)
                              gcACGCCGGTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAgg                                                                                                                <  1:748164/143‑1 (MQ=255)
                                aCGCCGTTTTACTGGTCCAGGATGAAGGTATTACTGACGTTTTGTATGTTAATCATTTTTCGACTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCCTGTTGTCCGACCTACGGGGCGCGCAATTGTAGGCCGGATAAGGCg                                                                                                              >  2:758384/1‑143 (MQ=255)
                                  gtctttttGCTGGTGCAGCATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGtt                                                                                                            <  2:189258/139‑1 (MQ=255)
                                     gTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTATGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGTCCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAc                                                                                                         <  2:868128/143‑1 (MQ=255)
                                       tttGCGGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCGCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                                                       <  1:984407/143‑1 (MQ=255)
                                       tgttcTGGTGCACGATGAACGTTTTACTGGCGGTTTGTACGTGAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgc                                                                                                       <  2:1305173/139‑1 (MQ=25)
                                        ttGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCTACCTACGGGGAGGGAATTAGGAGGTCGGATGAGGCGTTTAagcg                                                                                                      >  2:922537/1‑142 (MQ=255)
                                         tGCGGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTAcgccg                                                                                                     <  1:428089/143‑1 (MQ=255)
                                              gTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                                                                >  1:773026/1‑143 (MQ=255)
                                              gTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                                                                <  1:788759/143‑1 (MQ=255)
                                              atGCATGATGAAGGTTTTACTTATGTTTTTTACGTTAATCATTTTTCGCCACGTGGTGCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                                                                <  1:189217/142‑1 (MQ=25)
                                                gCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                                                              >  1:134489/1‑143 (MQ=255)
                                                 cAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                                                             <  1:922106/143‑1 (MQ=37)
                                                 cAGGATGAAGGTTCTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                                                             <  1:513760/143‑1 (MQ=255)
                                                  agcagtaaGGCTGTACTGACGTTTTTTACGTTAATCGTTTTTCGCCTCGCGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                                            <  1:57163/137‑1 (MQ=21)
                                                    gATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTCCGGGGAGCGCATTGGTCGGCAGGTAAACCCGTTTACGCCGCATCCGGCAcc                                                                                          >  1:1174425/1‑143 (MQ=255)
                                                        aaGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCt                                                                                      >  1:950729/1‑143 (MQ=255)
                                                        aaGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCt                                                                                      <  1:464540/143‑1 (MQ=255)
                                                        aaGGTTTGACTGACGTTTTGTACGTTAAGCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCt                                                                                      <  2:39470/143‑1 (MQ=255)
                                                         aGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTc                                                                                     <  2:1158785/143‑1 (MQ=255)
                                                          ggTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTCACGCGTCTTATCCGACCTACGGCCAGCGCATTCGGAGGCCCGATAAGTCGTCCACGCCGCATCCCGCACCCGcccc                                                                                    >  1:909900/1‑140 (MQ=25)
                                                            ttttACTGACGTTTTGTACGTTAATCATTTTTAGACTCGTGGTTCGAGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGGGTTTCCGCCGCATACGGCACCGGCTCGAt                                                                                  >  1:939189/1‑143 (MQ=25)
                                                             tttACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAAtc                                                                                 <  1:985899/143‑2 (MQ=255)
                                                               tACTGGCGTTTTGTACGTTAAGCATTGTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCt                                                                               <  2:48576/143‑1 (MQ=255)
                                                               tACTGACGTTTTGTACGTTAATCAGTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCt                                                                               <  2:150197/143‑1 (MQ=255)
                                                               tACTGACGTTTTGTACCTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACACCGCATCCGGCACCGGCTCAATTCt                                                                               <  2:722160/143‑1 (MQ=255)
                                                                acccaCGGTTCGTACGTTAAACATTCTCCCCCCCCTGGGTCGGATGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                                                              <  1:363542/139‑1 (MQ=17)
                                                                aCTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTg                                                                              <  1:101292/143‑1 (MQ=255)
                                                                   ggcGTTTTGTACGTTCAGCGTTTTTGGCCTCGTGGTTCGGGTGTCGGATGCGACGCGGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGaaa                                                                           <  2:166655/141‑1 (MQ=21)
                                                                   gACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGAGAAGCTGACGCGGGTTATCCGACCTGCGGGGAGCGCATTTGTAGGCGGGATAAGGCGATTACGCCGCATGCGGCACCAGCTCCAtgatgcga                                                                           >  1:91738/1‑136 (MQ=255)
                                                                      gTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAAc                                                                        <  1:897866/143‑1 (MQ=255)
                                                                         ttGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAACGCGTTTACGACGCATCCGGCACCGACTCCATTCCGCAACACCgg                                                                     >  2:961982/1‑142 (MQ=25)
                                                                         ttGTACGTTAATCATTTTTCGCCTAGTGGTGCTACTCTCGGATGCCACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGa                                                                     <  1:1174289/143‑1 (MQ=25)
                                                                          tGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTAGCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGAt                                                                    <  1:586620/143‑1 (MQ=255)
                                                                          tGTACGTTAATCATTTTTCGCCTCGGGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGAt                                                                    <  1:996197/143‑1 (MQ=255)
                                                                             aCGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGCCGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGac                                                                 <  1:570413/143‑1 (MQ=255)
                                                                               gTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACCGGGAGCGCATTTGTATGCCGGATAAGGCGTTTACGTTGCTTCCGTCACCAGCTCAATTCTGCAAAACCGATGacac                                                               >  1:239938/1‑143 (MQ=255)
                                                                                   ttgagttttCTCCTCGTGGTTCGGGTGTCGGATGCGAGTCTGACGCGTCTTATCCGACCTACGGGTAGCGCATTTGTATTCTGGATAAGGCGTTCACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACcagc                                                           <  2:961672/138‑1 (MQ=25)
                                                                                         tttCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCtgt                                                     >  1:752520/1‑143 (MQ=255)
                                                                                           gcGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCGACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTgtgt                                                   <  2:1272688/142‑1 (MQ=255)
                                                                                            cGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGta                                                  <  1:1097782/143‑1 (MQ=255)
                                                                                             gCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATACGACCTACGGGGAGCGCACTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCGCGATTCTGCAAGACCGAGGACACGGGCAGCggtgcac                                                 >  2:365213/1‑140 (MQ=21)
                                                                                                  gTGGTTCGGGTGTCGGATGCGTCGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGga                                            <  2:267794/143‑1 (MQ=255)
                                                                                                     gTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTCCAAAACCGATGACACCAGCCGCCGAGTATACggccga                                         >  2:331179/1‑139 (MQ=25)
                                                                                                     gTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCAGTTGTAGGCCGGATAAGGCGTCTACGCCGCATCCGGCACCGGCTCAATCCTGCAACACCGATGACACCAGCGCCTGTGCACACCgatca                                         >  2:953629/1‑141 (MQ=21)
                                                                                                       tCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGatgatg                                       <  1:331950/143‑1 (MQ=255)
                                                                                                          ggTGTCGGATGCGACGCTGACGCGGCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCgg                                    <  1:1055820/143‑1 (MQ=255)
                                                                                                          ggTGTCGGATGCGACGCGGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCgg                                    <  1:143222/143‑1 (MQ=255)
                                                                                                           gtgtCGGATGCGATGCTGACGCGTCTTAGCCGACCGACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCggg                                   <  1:735564/143‑1 (MQ=255)
                                                                                                               cGGATGCGACGCTGACGCGTCTTCCACATCCAACGACCAGAGCTTTTGTTGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGgtcgt                               <  1:1174623/143‑1 (MQ=37)
                                                                                                               cGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCCATTCTACAAAACCGATGACACCAGCAGCTGCGTATACGGATGATGCGGgtcgt                               >  1:780761/1‑143 (MQ=255)
                                                                                                                gtaTGCGCCGCTGACCCGTCTTACCCGACCTACGGGGAGCGCATTTGCAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGgtcgtc                              <  1:182529/141‑1 (MQ=255)
                                                                                                                gggtgggACGCTGACGCGTATTATCCGTCTTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGgtcgtc                              <  2:166678/137‑1 (MQ=37)
                                                                                                                  aTGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGa                            <  2:732824/143‑1 (MQ=255)
                                                                                                                   tgagccGCTGCCGCGTCTTTGCCGTCCTACGGGGAGCCCATTTGTAGGCCGGATAAGGCGTGTACGCCGCAGCCGGAACCGGCTCAATGGTGCACCACAGAAGAATTCAGCAGCGTTGTATACGGATGATGCGGGTCGTCGAg                           <  1:252141/138‑1 (MQ=255)
                                                                                                                    gCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGc                          <  2:832060/143‑1 (MQ=255)
                                                                                                                      gctgcggACGCGTCTGTTCCGCCGGCCGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCAc                        <  2:52634/137‑1 (MQ=38)
                                                                                                                      gACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCAc                        >  1:1234486/1‑143 (MQ=255)
                                                                                                                           tGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGcggt                   >  1:972272/1‑143 (MQ=255)
                                                                                                                             aCGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGcggtcg                 <  1:706057/143‑1 (MQ=255)
                                                                                                                             aCGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCCGTGTATACGGATGCTGCGGGTCGTCGATCACGcggtcg                 >  1:683030/1‑143 (MQ=255)
                                                                                                                               gcgTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGcggtcggt               >  1:464613/1‑143 (MQ=255)
                                                                                                                               gcgTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGcggtcggt               >  1:510876/1‑143 (MQ=255)
                                                                                                                               gcgTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGACGTCGAGCACGcggtcggt               >  1:659008/1‑143 (MQ=255)
                                                                                                                                   cTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAAc           <  1:649630/143‑1 (MQ=255)
                                                                                                                                    ttaccagACCTACGGGGCGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAAcc          <  1:654895/137‑1 (MQ=255)
                                                                                                                                     tATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAAccc         <  1:367522/143‑1 (MQ=255)
                                                                                                                                       tCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCAc       <  2:770165/143‑1 (MQ=255)
                                                                                                                                       tCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACCCGGTCGGTTAACCCAc       >  2:550623/1‑143 (MQ=255)
                                                                                                                                        gcgaccgacGGGGGGAGCATCTGGAGGCCCGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCAct      <  1:1016031/142‑1 (MQ=255)
                                                                                                                                         cGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACGGATGACACCTGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCActc     <  1:829460/143‑1 (MQ=255)
                                                                                                                                         cGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCActc     <  1:34093/143‑1 (MQ=255)
                                                                                                                                         cGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACAAGCAGATGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCActc     >  1:605106/1‑143 (MQ=255)
                                                                                                                                            ccTACGGGGAGCGCATTTGTAGGCCGGATAATGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCTAGCACGCGGTCGGTTAACCCACTCTcc  <  2:1012588/143‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                              
TGAGCGAGGCGCGATTGAGGACGGGCAGGCGCACGCCGTTTTGCTGGTGCAGGATGAAGGTTTTACTGACGTTTTGTACGTTAATCATTTTTCGCCTCGTGGTTCGGGTGTCGGATGCGACGCTGACGCGTCTTATCCGACCTACGGGGAGCGCATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCACCGGCTCAATTCTGCAAAACCGATGACACCAGCAGCTGTGTATACGGATGATGCGGGTCGTCGAGCACGCGGTCGGTTAACCCACTCTCC  >  NC_000913/4317808‑4318090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.