New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4606558 =NA (NA)3 (0.060) 3/270 7.9 NA noncoding (1/92 nt) REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4606590 = NA (NA)noncoding (33/92 nt) REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Coverage evenness skew score above cutoff.

GTTTTCAGCTTTTCGTCAATAGTTAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCG  >  NC_000913/4606452‑4606732
                                                                                                                                           |                                                                                                                                              
gTTTTCAGCTTTTCGTCAATAGTTAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACg                                                                                                                                            >  1:722188/1‑143 (MQ=255)
 ttttCAGCTTTTCGTCAATAGTTAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTATTATCTGGCcgacga                                                                                                                                           >  2:186394/1‑143 (MQ=255)
     taGCTTTTCGGCAATAGTTAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAggg                                                                                                                                       <  2:480520/142‑1 (MQ=255)
     cAGCTTTTCTCCAATAGTTCATTCTCGACAGCGTTGTAATTGCCGGCCCCCTGAACCTCGGGCGCACTGCGTGTAGGTTTGGTATGCATGCGGGGGACGATGCGGGCATTGCCTTTGGCGCGTCTTATCTGGCCTACGAAggg                                                                                                                                       <  2:17914/143‑1 (MQ=255)
       gCTTTTCGTCAATAGTTAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCt                                                                                                                                     <  1:922774/143‑1 (MQ=255)
         ttttCATCAATAGTTAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGCCGCTGGCGCGTCTTCTCTGGCCTACGAAGGGCTaa                                                                                                                                   >  1:25792/1‑143 (MQ=255)
          tttAGTGAATAGGTAATGATCGACAGAGGGGTAAGTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAAc                                                                                                                                  <  1:615658/143‑1 (MQ=255)
             cGTCAATAGTTAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAGGGGCTAACGTg                                                                                                                               >  1:200528/1‑143 (MQ=255)
                    aGTTAATCATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGttt                                                                                                                        <  2:414430/143‑1 (MQ=255)
                      ttAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTg                                                                                                                      >  2:332898/1‑143 (MQ=255)
                      ttAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGGGCAGGTTTTg                                                                                                                      >  2:333273/1‑143 (MQ=255)
                       tAATTATCGAGAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGt                                                                                                                     <  1:596957/143‑1 (MQ=255)
                       tAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGt                                                                                                                     <  1:631989/143‑1 (MQ=255)
                        gaTTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTa                                                                                                                    <  2:647464/142‑1 (MQ=255)
                        aaTTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTa                                                                                                                    >  1:145108/1‑143 (MQ=255)
                           tATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGt                                                                                                                 <  2:783569/143‑1 (MQ=255)
                            atggACAGAGGTGTAAGTGGTGGAACAATGTCCATCAGGAGAGTAGCGTGCAGGTTTGGTATGCATGCGGGGGTAGATGCCAGATGCCACGCTGGCTCGTTTTGTCTGGACTACGAAGGGCTAACGTGCAGGTTTTGTAGGTc                                                                                                                <  2:885657/140‑1 (MQ=37)
                            aTCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTc                                                                                                                >  2:765153/1‑143 (MQ=255)
                             tCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCg                                                                                                               >  1:56738/1‑143 (MQ=255)
                             gcGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGGCTTATCTGGTCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCg                                                                                                               <  1:403786/142‑1 (MQ=255)
                                aCAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGGTTGGTATGCATGCGGGGGCAGCTGCCAGATGCGACGCTGGCGCGNCTTATCTGGCCTACGAAGGGCTAACGGGCAGGCGTTGTAGGTCGGAt                                                                                                            >  2:32840/1‑143 (MQ=255)
                                  agagGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGACaa                                                                                                          >  1:632121/1‑143 (MQ=255)
                                   gagcggtAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTGTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAg                                                                                                         <  2:74727/138‑1 (MQ=255)
                                   gagGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAg                                                                                                         <  2:409254/143‑1 (MQ=255)
                                       tgtAATTGCTGGAAAAATGTCAAGCAGGACACTAGCGCGCAGGGTTGGTATGCGTGCGGGGGACGAGGGCGGATGCGCCCCTAGCGCGTCTTGTCTGTCCTACCAAGGACGAACGCGCAGATGTGGTCGGTCGtatacagagc                                                                                                     >  2:881134/1‑137 (MQ=255)
                                          aaTTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCCGACGCGCTGGTTTGGTAGGTCGGATAAGGCGTTCa                                                                                                  >  1:396015/1‑143 (MQ=38)
                                             tGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGTGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAAGCTGCGGGTTTTGTAGGTCGGATAAGGCGTTCAcgc                                                                                               >  2:658195/1‑143 (MQ=255)
                                              gCTGGAAAAATGTCCATCTGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgcc                                                                                              <  1:349837/143‑1 (MQ=255)
                                                  gAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGACTAACGTGCAGGTCTTGTAGGTCGGATACGGCGTTCAcgccgcct                                                                                          >  1:352817/1‑141 (MQ=255)
                                                        tGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATGCGGCGTGAACGCCTTATCCGacc                                                                                    <  2:156658/143‑2 (MQ=37)
                                                         gcccATCAGGAAACTAGCTTGCAGGTCTGGTAGGCATTCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCGACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATGCGGCGTGAACGCCTTATCCGacct                                                                                   <  2:441056/141‑3 (MQ=21)
                                                           ccATCAGGAAACTAGCGTGCAGGTGTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACgg                                                                                 <  2:90232/143‑1 (MQ=255)
                                                             aTCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTa                                                                               >  2:603347/1‑143 (MQ=255)
                                                             aTCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTa                                                                               >  1:825060/1‑143 (MQ=255)
                                                                 ggAAACTGGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCg                                                                           <  2:218623/143‑1 (MQ=255)
                                                                        tAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgaga                                                                     >  1:634549/1‑143 (MQ=255)
                                                                         aGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGAt                                                                    <  1:906567/143‑1 (MQ=255)
                                                                          gCGTGCAGGGTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGTGCGTCTTATCTGGGCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATa                                                                   <  2:317206/143‑1 (MQ=255)
                                                                              gCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTa                                                               <  1:258002/143‑1 (MQ=255)
                                                                              gCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTa                                                               <  1:767320/143‑1 (MQ=255)
                                                                               cAGGTGTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTaa                                                              <  2:351161/143‑1 (MQ=255)
                                                                                aGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTTTGTAGGGCGAACAAGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAc                                                             >  1:358236/1‑143 (MQ=38)
                                                                                    ttGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATGCGCCGAGATAATTAACCttt                                                         >  2:342207/1‑143 (MQ=255)
                                                                                         atgcatgcGGGGGCGGATGCCAGATGCGACGCTGGCGCGTCTTATCTGTCTTATGTAGGGCTACCGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCg                                                    <  1:903069/143‑1 (MQ=38)
                                                                                         atgcatgcGGGGGCAGATGCCAGATGCTACGCTGGCGCGTCTTATCTGGCCTACGAAGTGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCg                                                    <  1:335605/143‑1 (MQ=255)
                                                                                         atgcatgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCCGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTCCg                                                    >  2:849711/1‑143 (MQ=255)
                                                                                         atgcatgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCg                                                    <  1:920844/143‑1 (MQ=255)
                                                                                          tccaggcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGc                                                   <  1:839364/138‑1 (MQ=255)
                                                                                             atggGGGGGCAGATGCCAGATGCGCCGCGGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTg                                                <  2:95112/143‑1 (MQ=255)
                                                                                             atgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGGATATTAGGCGAGATAATTAACCTTTCTTCGCCTg                                                >  2:76939/1‑143 (MQ=255)
                                                                                               ccGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGCAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGc                                              <  1:133613/142‑1 (MQ=255)
                                                                                                cGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCg                                             <  1:446322/143‑1 (MQ=255)
                                                                                                  ggggCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCggg                                           <  2:445784/143‑1 (MQ=255)
                                                                                                      cagaggccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCAt                                       <  1:577522/143‑1 (MQ=255)
                                                                                                              agatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATACGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGCTAATTAACCTTTCTTCGCCTGGCGGGTCATAATGgcgc                               >  2:119748/1‑143 (MQ=255)
                                                                                                                atgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGa                             >  1:67592/1‑143 (MQ=255)
                                                                                                                 ggcGACGCTGGCGCGGCTTATCTGGCCTACGACGGGCTAACGTGCAGGTTGTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGAt                            <  2:945998/142‑1 (MQ=255)
                                                                                                                  gcGACGTTTTCGCCTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTATGTCTGATAAGGCGTGCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATa                           <  1:251817/143‑1 (MQ=38)
                                                                                                                  gcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGaga                           >  1:250646/1‑141 (MQ=255)
                                                                                                                  gcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATa                           <  1:880604/143‑1 (MQ=255)
                                                                                                                     aCGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATCATGGCGCGCTacac                        >  2:946896/1‑143 (MQ=255)
                                                                                                                     aCGCTGGCGCGTCTTATCAGGCAAACGATATGCTAAAGAGCAGGTGTTTTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATacac                        <  1:353730/143‑1 (MQ=38)
                                                                                                                      cGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACAcc                       >  1:236209/1‑143 (MQ=255)
                                                                                                                         tgtcgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGACCATCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTg                    <  1:439585/140‑1 (MQ=255)
                                                                                                                         tGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGGCAAGGCGGTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTg                    <  1:945328/143‑1 (MQ=255)
                                                                                                                           gcccgTCTTATCTGGCCTACGAAGGGCTAACGTGCATGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATGCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGaa                  <  1:32840/140‑1 (MQ=255)
                                                                                                                                tcgtATCTGGCCTAAGAGGGGCTGACGGGCATGGTTTGTAGTTCGGATAACGCTTTCACGCCGTAGCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCGGGCGGGTCATAATGGCGCGATACACCTTGAAGCGcc             <  2:2507/140‑1 (MQ=255)
                                                                                                                                tCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGcc             <  1:207098/143‑1 (MQ=255)
                                                                                                                                  ttATCTGGCCGACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGGGTATTCGGCGAGCTAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCt           <  1:88186/143‑1 (MQ=255)
                                                                                                                                   tATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTg          <  1:757885/143‑1 (MQ=255)
                                                                                                                                         gCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTgcg    >  2:942974/1‑143 (MQ=255)
                                                                                                                                         gCCTACGAAGGCCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTgcg    <  1:35742/143‑1 (MQ=255)
                                                                                                                                           cTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATCATGGCGCGATACACCTTGAAGCGCCCTGTGTGcgcg  >  2:548468/1‑143 (MQ=255)
                                                                                                                                           |                                                                                                                                              
GTTTTCAGCTTTTCGTCAATAGTTAATTATCGACAGAGGTGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCGATACACCTTGAAGCGCCCTGTTTGCGCG  >  NC_000913/4606452‑4606732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.