Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 50 [0] [0] 51 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)50 (0.950) 42/284 0.2 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  >  NC_000913/4001508‑4001787
                                                                                                                                              |                                                                                                                                         
agtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatc                                                                                                                                           <  1:577561‑M2/1‑1 (MQ=255)
 gtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct                                                                                                                                          >  1:421556‑M2/142‑143 (MQ=255)
   atggtttgatcttgtcgaaccggacgacggcgatcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc                                                                                                                                        <  2:439438‑M2/4‑1 (MQ=255)
   atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc                                                                                                                                        <  1:362567‑M2/4‑1 (MQ=255)
   atggattgagcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc                                                                                                                                        <  2:421833‑M2/4‑1 (MQ=255)
        ttgatcttgtcgaaccggacgacgacgagcgactgcgcgtaccatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcgtcggcacgtctctttgacgacgacgccgacctgcaaCCccttctc                                                                                                                                   >  2:659797‑M2/135‑142 (MQ=255)
        ttgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgccgacggcctgcacCTCcttctt                                                                                                                                   >  2:696700‑M2/135‑143 (MQ=255)
        ctgatctggtcgaaccggaggacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttctt                                                                                                                                   <  2:866897‑M2/9‑1 (MQ=255)
                 ccgacccggacgacgacgagcgagtgcgggtacgatcggaacttggccagagcctggcaacccgcccggaactggaagacctcgaagcatcggcacgtttctttgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGa                                                                                                                          <  1:283181‑M2/18‑1 (MQ=255)
                  cgaaccggacgacgacgagcgacggcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa                                                                                                                         <  1:785246‑M2/19‑1 (MQ=255)
                          acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa                                                                                                                 <  2:608748‑M2/27‑1 (MQ=255)
                          acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa                                                                                                                 <  2:281475‑M2/27‑1 (MQ=255)
                           cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa                                                                                                                <  1:545737‑M2/28‑1 (MQ=255)
                             gctgcgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgtagcatcggcacgtttctttgaagtcgacgacggcttgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGa                                                                                                              <  2:508820‑M2/30‑1 (MQ=255)
                             acgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGa                                                                                                              <  1:419460‑M2/30‑1 (MQ=255)
                                tgcagcggctgcgcgtgcaagctgaagttggccagagtctggcaacccgcccggaactggaagacatcgcagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCa                                                                                                           <  2:466247‑M2/33‑1 (MQ=255)
                                  gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGTCGCTCACg                                                                                                         >  1:43957‑M2/109‑143 (MQ=255)
                                         tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa                                                                                                  <  1:120544‑M2/42‑1 (MQ=255)
                                               tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc                                                                                            <  1:44136‑M2/48‑1 (MQ=255)
                                               tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtctctttgaagacgacgccggcgtgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCGCGTAACTCCAc                                                                                            >  2:878360‑M2/96‑143 (MQ=255)
                                                  aatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGGAACTCCACtgt                                                                                         >  2:791071‑M2/93‑143 (MQ=255)
                                                      tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAGTGTGGCa                                                                                     >  1:824884‑M2/89‑143 (MQ=255)
                                                      tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACAGAGGCa                                                                                     >  1:816106‑M2/89‑143 (MQ=255)
                                                      tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTGCTTTGAAGATGCGGAGGATCACGCCGGTAACTCCACTGTGGCa                                                                                     >  1:592629‑M2/89‑143 (MQ=255)
                                                               ccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATc                                                                            >  1:668998‑M2/80‑143 (MQ=255)
                                                                  gagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt                                                                         <  1:930821‑M2/67‑1 (MQ=255)
                                                                    gcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa                                                                       <  1:223358‑M2/69‑1 (MQ=255)
                                                                     cctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGGAt                                                                      >  2:388333‑M2/74‑143 (MQ=255)
                                                                      ttggcaacgcgcccgtaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg                                                                     <  1:475142‑M2/71‑1 (MQ=255)
                                                                              ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCCTTTACCCTCCGTGATGGTCGTCTg                                                             >  1:769541‑M2/65‑143 (MQ=255)
                                                                                gcccggaactggaagacatcgaagcatcggcgcgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt                                                           <  2:729745‑M2/81‑1 (MQ=255)
                                                                                  ccggaactggaagacatcgaagcatcggcacgaaaaacttaagtctacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa                                                         <  1:396896‑M2/83‑1 (MQ=255)
                                                                                    ggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct                                                       <  1:918950‑M2/85‑1 (MQ=255)
                                                                                      aactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct                                                     <  2:421556‑M2/87‑1 (MQ=255)
                                                                                        ctggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc                                                   <  1:866025‑M2/89‑1 (MQ=255)
                                                                                           gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTGCTCTgcgtg                                                >  1:13635‑M2/52‑143 (MQ=255)
                                                                                            acgacatcgaatcctcggcacgtttctttgcagacgaccacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga                                               <  2:473989‑M2/93‑1 (MQ=255)
                                                                                              gacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc                                             >  1:6144‑M2/49‑143 (MQ=255)
                                                                                                catcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgt                                           <  2:611346‑M2/97‑1 (MQ=255)
                                                                                                 atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgcgagcgtg                                          >  2:71622‑M2/46‑143 (MQ=255)
                                                                                                   cgacgcatcggcacgtttctttgaagacgacgacggcctgcatCTCCGTCTTCTTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa                                        <  2:358785‑M2/100‑1 (MQ=255)
                                                                                                          tcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGGGTgagagtgaagtcccac                                 >  1:347980‑M2/37‑136 (MQ=255)
                                                                                                           cggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATTTTCGGCGGTTTACTCTGCGTGAGCGTGAACTGCCCGc                                <  1:907784‑M2/108‑1 (MQ=255)
                                                                                                            ggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGCGATGGTCGTCTGTTTGCTCTGCGTGCGCGTGCACTGTCCGCt                               >  1:326563‑M2/35‑143 (MQ=255)
                                                                                                                         gaagaggacgacggcctgcatCTCCTTCTTCTTCTTTTAAGATGCGGAAGATCACGCCGGTAACTCCTCTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc                  <  2:392207‑M2/122‑1 (MQ=255)
                                                                                                                          atgacgacggcggcgtgctgCTCGTTCTTCTTCTTTGAGGAGGCGGATGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAGTGCCCGCTTTTCGTCTGTATCg                 <  2:916955‑M2/123‑1 (MQ=255)
                                                                                                                            gacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATAACGCCGGTAGATCCACTGTGGCATTTACAATCAGTGATGGTCGTCAGTTTGCTCTGCGGGAGCGTGAACTGCCTGCTTTTGGTCTGTAGCGTa               >  1:193577‑M2/19‑143 (MQ=255)
                                                                                                                                 cgacggcctgcatCTCCTTCTTCTTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATGTACCATCCGTGTTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGt          <  1:378340‑M2/130‑1 (MQ=255)
                                                                                                                                     ggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACCGTGGCATTTACCATCCGTGATGGTCGTCTGTTGCCTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTGTCGTACGCGTGgcc      >  1:63511‑M2/10‑143 (MQ=255)
                                                                                                                                        cttcaccTCCCTCTTCATCTTTGGACAGGCGGAATATCACGCCTGTACCTCCACGGTGGCATTTACCATCCGTGATTGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTa   <  2:824884/137‑1 (MQ=255)
                                                                                                                                         tgcatTTTCTTCTTCTTCTTTGAAGATGCGGAAGATCTCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCTTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAg  <  2:389846‑M2/138‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                         
GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG  >  NC_000913/4001508‑4001787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: