New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1512410 = | 39 (1.060) | 3 (0.080) | 3/276 | 5.3 | 7.3% | coding (757/1146 nt) | ydcS | putative ABC transporter periplasmic binding protein |
? | NC_000913 | 1512451 = | 38 (1.060) | coding (798/1146 nt) | ydcS | putative ABC transporter periplasmic binding protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGC > NC_000913/1512271‑1512547 | cATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATCAGCGATTTCAAAAACGAGGGCGAGGTTGcct > 2:628943/1‑141 (MQ=255) aTCCGTATCAACTGACCGAAGAACAGTAACTGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACGACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGcc < 2:532547/143‑1 (MQ=255) aCTCACCGAATAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATc < 1:71755/143‑1 (MQ=255) aCTCACCGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATGCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATc > 1:334519/1‑143 (MQ=255) aCTCACCGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATc > 1:495167/1‑143 (MQ=255) cGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGCGGGTGTGGTTGCCTCCAGTGCCTGGCCCTATCAGGCCa > 2:497668/1‑143 (MQ=255) cGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCa > 1:464044/1‑143 (MQ=255) gaagaaCAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCGATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTCTCCGGcccc > 1:350531/1‑141 (MQ=255) aagaagCGTACCAGGCGGGGCGGAAAGGGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAAc < 1:207568/143‑1 (MQ=255) aaCAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGcc < 1:510261/143‑1 (MQ=255) cAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGc > 1:216257/1‑143 (MQ=255) tGCCGAAAGTGCTGCGCGCTCAACACAGTTTGAGCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGc < 1:256410/143‑1 (MQ=255) gAAGGTGCTGCGCGCTCAACACAGTTTGTTCCATTACTTCTTTTATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGc < 2:137939/143‑1 (MQ=255) gctgcGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGCAAGACGAAGGCCAGCCTGTTg < 2:372160/143‑1 (MQ=255) tCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGACCTAAAAGCAGAAGACCAGCATGTTGCTACCGttt > 1:76543/1‑143 (MQ=255) acacAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCACGCCAACGCCCTGAAAGCCGAACGCCACCCTGTTGCTCCCGTTTTcc > 1:68824/1‑143 (MQ=255) acaGTTTGGTCCATCGGTACTGGCATGACACTACCGGGCAAATGGGCGATTTGAAAAACGAGGGTGTGGCTGCTTCCAGTGCCTGGCCCTAGCAGGCCAACGCCCTGAAAGCGGAAGGCCAGCCTGTTGCTACCGTTTTCCCg < 1:152266/143‑1 (MQ=255) acaGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCACTGAAAGGCGAAGGCGAGCGTGCCGCTACGGCTCTCCCg > 2:518218/1‑143 (MQ=255) gATCCATCGCTACTGGCATGACACTACCGTGCAATTGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAaggagg < 2:356082/143‑1 (MQ=255) aTCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAggg < 1:82152/143‑1 (MQ=255) aTCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGACCCTAGCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCGGTTGCCACCGCTTTCCCGAAGGAAGGTGtt > 2:95418/1‑143 (MQ=255) cTACTGGCATGACGCTACCGTGCCAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCg < 2:15642/143‑1 (MQ=255) tGGCATGGTACGACCGGGCAAATGCGCGATTTGAAAGACGAGGGTGTGGTTGCTTCCGGTGCCTGGCCCTCTCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTg < 2:255692/143‑1 (MQ=255) tGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGCTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTg < 1:563874/143‑1 (MQ=255) ggcctcacacTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTgg < 1:613683/137‑1 (MQ=255) gCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGGTACCGGTTggg > 2:519163/1‑143 (MQ=255) gcggccGTGCAAACGACCGATTTCAAAAACGGGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATac < 2:438125/139‑1 (MQ=255) acgaCCGGGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCCGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATac < 1:287708/140‑1 (MQ=255) ccGTGCAAATGAGCGCTTTCAAAACCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATaccacc < 2:66797/143‑1 (MQ=255) aaaTGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCAtgctg < 1:633716/143‑1 (MQ=255) gAGCGATTTCAAAAACGAGGGTGGGGTTGCTGCCAGGGCCGGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATa < 1:9143/143‑1 (MQ=255) gAGCGATTTC‑AAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGAGTGGTCTGTTGGGATGATACCACCATGCTGCATag > 2:40010/1‑143 (MQ=255) aTTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCGACCGTCTCCCCGACGGAGGGTGTTACCGGTTGGGCTGCTACCACCCTGCTGCATcccgaa > 2:6729/1‑143 (MQ=255) ttCAAAGAGGTGGGTGTGGTTGTTTCCAGTGCCTGGCCCTAGCAGGCCAACGCCCTGATAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATTCCACCATGCTGCATagcgaagc < 2:373615/143‑1 (MQ=255) tCAAAAACGAGGGTGTGGTTGCTTCCAGTGACTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGACCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTCACCGGCTGGGCTGATACCACCATGCTGCATcgcgaagag > 2:92177/1‑141 (MQ=255) aaaaaCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAgcgaagcgaa < 2:216257/143‑1 (MQ=255) aaaaaCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTGTTCCCGACGGAGGGGGTTACCGGTTGGGCTGATACCACCATGCGGCATagcgaagcgca > 2:413935/1‑141 (MQ=255) tgggtgtGCTTCTGGTGCCTGTCGCTAAGTGGCTAACGCCCTGAGAGCCTAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGttt < 2:108234/137‑1 (MQ=255) tgGTTGCTGCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGATTTCCCGAAGGAGGGGATACCCGGTTGGGCTCATACCACCCTGCAGCGAAGCGAACCGAAAGAACCggcccgc > 2:129597/1‑138 (MQ=255) | CATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGC > NC_000913/1512271‑1512547 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |