New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 153370647 (1.280)3 (0.090) 3/272 5.3 6.0% coding (146/570 nt) yddH flavin reductase like‑protein
?NC_000913 = 1533713 49 (1.390)coding (139/570 nt) yddH flavin reductase like‑protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCATCACGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAAT  >  NC_000913/1533564‑1533843
                                                                                                                                              |                                                                                                                                         
ttCATCACGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAGTCGCCACGCGTGGAg                                                                                                                                           >  1:624604/1‑143 (MQ=255)
   atcaCGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGtt                                                                                                                                        <  1:392374/143‑1 (MQ=255)
   atcaCGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGtt                                                                                                                                        <  1:198908/143‑1 (MQ=255)
              acacacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCAcc                                                                                                                             <  1:451256/143‑1 (MQ=255)
               cacacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGCTCACGATGCCCAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGCTTTCTCTACCACACTCGCGACGCCGGGAGGTTCCAACTCCACCg                                                                                                                            >  1:178985/1‑143 (MQ=255)
                 cacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGc                                                                                                                          >  1:26905/1‑143 (MQ=255)
                    ttCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGACGTTCAAACTCCACCGGCact                                                                                                                       >  1:33470/1‑141 (MQ=255)
                     tCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCACTg                                                                                                                      >  2:346129/1‑143 (MQ=255)
                      cccACCGCCCACGTCCAGTTAGTTGCTGCAACACCCGGGATAACGATGCCACATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGa                                                                                                                     >  2:353671/1‑143 (MQ=255)
                       ccACCGCCTCCGTCCAGTTAGTTGCTGCATCGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCACCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGAc                                                                                                                    <  1:651088/143‑1 (MQ=255)
                        cACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATATATCACGATCACCACGCGTGGAGGTTCACACTCCACCGGCATCGAcc                                                                                                                   >  2:138997/1‑143 (MQ=255)
                        cACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGACGCCAAATTTACCGTTATGTGCAATCAACTCCCTGGTCCACGTCGAATTATCTACCCCAATCGCCACCCGCGGCGGTCCATACTCCACCCGCACTGAcc                                                                                                                   >  2:315630/1‑143 (MQ=255)
                                 cGTCCAGTTAGTTGCTGCAGCGCCCGGGATAACGAGGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAg                                                                                                          <  2:123367/143‑1 (MQ=255)
                                            ttGCTGCAACGTCCGGGATAACGAGGCCGTATTTACCGTGATGTTCAATCAGCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTa                                                                                               <  2:55515/143‑1 (MQ=255)
                                                    aCGCCCGGGGTAACGCTGCCAAATTTACCGTTAGGTTCAATGAGCGCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCGGCAGCCATAATGTTACGCCGCTg                                                                                       <  1:290369/143‑1 (MQ=255)
                                                          tgcaTAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTg                                                                                 <  2:27681/140‑1 (MQ=255)
                                                               aaCGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCAt                                                                            >  2:25158/1‑143 (MQ=255)
                                                                 cGATGCCAAATTGACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGGGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCg                                                                          <  2:608218/143‑1 (MQ=255)
                                                                       cAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTg                                                                    >  1:223470/1‑143 (MQ=255)
                                                                       cAAACTTACCGTTATGTTCCATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTg                                                                    <  1:138416/143‑1 (MQ=255)
                                                                        aaaTTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTgg                                                                   >  1:580408/1‑143 (MQ=255)
                                                                         aaTCTACCGTGATGCTCAATCGACTCCCTGCTCCATGTCGATTTACCTACCACAATCGCCACGCGTGGAGTTTCACACGCCACCGGCCTTCACCAACCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGt                                                                  <  1:254220/143‑1 (MQ=255)
                                                                          agttgcggTTATGTTCAATCACCTCCCTGGTCCATGTCGCTTTATCTACCACCATCGCCACGCGTGGAGGTTCAAACTCCGCCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTg                                                                 <  2:634502/136‑1 (MQ=255)
                                                                           cttACCGTTCTGTTCATTCAACTCCCTCGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTCCAAACGCCACCGGCAGTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGa                                                                <  1:207445/142‑1 (MQ=255)
                                                                            ttACCGTTATGTTCACTCAACTCCCGGTTCCATGTCGAGTTATCTACCACAAGCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGAt                                                               <  2:456363/143‑1 (MQ=255)
                                                                            ttACCGTCATGTTCAATCAGCTCCCTGGTCCAGGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACGCCACCGGCATTGACCACGCTGAAGTCACTATATTTTGCGGCTTGGATTGCTCATCGAAACTGGTGAt                                                               <  1:642283/143‑1 (MQ=255)
                                                                               ccGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCGAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCaa                                                            <  1:353671/143‑1 (MQ=255)
                                                                               ccGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACAGGCATAAACCAAGCTTTAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCaa                                                            >  1:491394/1‑143 (MQ=255)
                                                                                       ttCCATCAACTCCCTGGTCCATGTCGATTTATCTACCACAAACGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGCTTGCTCATCGCAACTGGTGATCAAGACCGGTg                                                    >  2:589190/1‑143 (MQ=255)
                                                                                         caatcacCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTggg                                                  <  1:570700/143‑1 (MQ=255)
                                                                                          aatcaaCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGCTCAAGACCGTTGGGc                                                 >  2:233204/1‑143 (MQ=255)
                                                                                           atcaaCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATCGCTCATCGAAACTGGTGCTCCAAAGCATTGGGcc                                                >  2:421224/1‑143 (MQ=255)
                                                                                             cggcTCCCTCGTCGCGGTCGATTGTTCTACCACCATCGCCTCGCGTGGAGGTTCAAACTGCACCGGCATTGACCAGGCTGCAGCTATAATGTTACGCCGCTGGGATTGCTCATCGTAACTGGTGATCAAGACCGTTGGGCCAt                                              <  2:198077/140‑1 (MQ=255)
                                                                                              aacgtccTGGGCCATGTCGATGTACCTACCACAATCGCCACGCGTCGAGGTTCAAACTCCACCGGGTTTGACCAGGCTGCAGCCATAATGTGAGGCCGCTGGGAGTGCTCAGCGAAACTGGTGATCAAGACCGTTGGGCCATg                                             <  2:94719/138‑1 (MQ=255)
                                                                                                 tCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGAtt                                          <  1:436151/143‑1 (MQ=255)
                                                                                                     cggTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAAc                                      <  1:78875/142‑1 (MQ=255)
                                                                                                              tCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGAAGGCTg                             >  1:131625/1‑143 (MQ=255)
                                                                                                                   ttATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATg                        <  1:25158/143‑1 (MQ=255)
                                                                                                                        tACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGACTTAACAGACGGCTGGCATGGAGTa                   >  1:466178/1‑143 (MQ=255)
                                                                                                                         aCCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTaa                  <  2:26905/143‑1 (MQ=255)
                                                                                                                           cacaATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAAtt                >  1:101688/1‑143 (MQ=255)
                                                                                                                           cacaATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGATACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAAtg                >  1:171562/1‑142 (MQ=255)
                                                                                                                                tCGCCACCCGTGGACGTCCAAACCCCACCGGCATTGGCCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATg           <  1:655638/143‑1 (MQ=255)
                                                                                                                                   ccccgcgTGGGGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATgggg        <  2:624604/140‑1 (MQ=255)
                                                                                                                                   ccACGCGTGGAGGTTCAAACTCCACCGGCATGGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATgggg        <  1:474123/143‑1 (MQ=255)
                                                                                                                                       gcgTGGAGGTTCAAACCCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGa    <  1:138997/143‑1 (MQ=255)
                                                                                                                                       gcgTGGACGTTTATTCTCCACCGGTATTGTCCGGTCTGCAGCAATAACGTTATGCCGCTGGTATTGCTCATCGAAACTGGTGAACAAGACCGTTGGGTTATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGa    <  2:251574/143‑1 (MQ=255)
                                                                                                                                         gTGGAGGTTCAGACTCCACCGGCATTGGCCGGGCTGCAGCCATACTGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGCCCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAAt  <  1:58930/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                         
TTCATCACGCCCCGACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAAT  >  NC_000913/1533564‑1533843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.