| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 2 (0.040) | 35 (0.730) | 33/282 | 0.5 | 94.6% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 2 (0.040) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG > NC_000913/4001510‑4001787 | tatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatctc < 1:349914‑M2/3‑1 (MQ=255) atggtttgatcttgtcgaaccgtacgacgacgagcgactgcgcgtacaagctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 1:678685‑M2/4‑1 (MQ=255) ggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatctccgt > 1:221385‑M2/138‑141 (MQ=255) gattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 1:812773‑M2/7‑1 (MQ=255) gattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc > 1:434865‑M2/137‑143 (MQ=255) tgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttc < 2:205103‑M2/10‑1 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttc > 1:168802‑M2/131‑143 (MQ=255) cggacgacgacgagcaacagcgcggagaagctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 1:782516‑M2/24‑1 (MQ=255) gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACg > 1:472391‑M2/109‑143 (MQ=255) cgcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGc < 1:51992‑M2/36‑1 (MQ=255) cgactgcgcgtacaatctgaacttggccagaggctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 1:616257‑M2/38‑1 (MQ=255) cgcgtacaatctgaacttggccagagcctggcaacccgcccgcaactggaagacatcgaagcatcggcacgttgctttgaagacgacgacggcccgcatCTCCGTCTTCTCCTTTGAAGCTGCGGgggatcacccccgcgccg > 2:468726‑M2/100‑136 (MQ=255) ggcTGAACATGGCCAGCGCCGGGCAACCGGGCCGGAACTGGAAGACAGCGGAGCAGCGGGACGTTTCTGTTAAGACGACGACGGTCTGCAT‑‑‑‑‑CTCCTTCGTCTTCTTGGAAGATGCGGAAGAGCACGCCGGTAACTCCACtgtg < 2:837839/141‑1 (MQ=255) atctgaacttggccagagccgggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgacgacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 1:423437‑M2/52‑1 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACCGCGGCATCTAc > 1:489349‑M2/84‑143 (MQ=255) cctcgcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAt < 1:484614‑M2/70‑1 (MQ=255) gcaacccggccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑Ggtc < 1:701340‑M2/74‑1 (MQ=255) gcaacccgcccggaactggaagacatcgaagcatcggcacgtttccttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑Ggtc < 1:848790‑M2/74‑1 (MQ=255) aacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑Ggtcgt < 1:821318‑M2/76‑1 (MQ=255) acccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCCTCCGTGCT‑Ggtcgtc > 1:36349‑M2/67‑143 (MQ=255) cccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCt > 1:413884‑M2/66‑143 (MQ=255) cgcccggaactggaagacatcgaagcatcggcacgcttccttgaagacgacgacggcctgcatCTCCCTCTTCTTCTTTGAAGATGCGGAAGACCACGCCGGCAACTCCACTGTGGCATTTACCATCAGTGAT‑GGTCGCCTGt > 2:203454‑M2/64‑143 (MQ=255) ctggaagacatcgaagcatcggcacgtttatttgaatacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTgc < 1:681732‑M2/89‑1 (MQ=255) ggcagacatcgaagcatcggcacgtttcttggaagacgacgacggcctgcatCTCCTTCGTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACGCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTgcgt < 2:141136‑M2/91‑1 (MQ=255) catcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTgcgtgagcgt < 1:450894‑M2/97‑1 (MQ=255) cgtggggtcggcacgttgctttgaagccgacgatggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAGCACGCCGTTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 2:297‑M2/100‑1 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTACTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAGTTACGCTCGGTGAT‑GAGCGTCGGTTTcctctgcgtgggcgtgacccgc > 2:301369‑M2/40‑138 (MQ=255) cggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGc > 1:13368‑M2/36‑143 (MQ=255) ggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACGGTGGCATTTACGATCTGTGAT‑GGTCGGCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCt > 1:746273‑M2/35‑143 (MQ=255) ttGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTCA‑GATAGGCGGTAGTTTTTCTGTTTACTCTGCGTGAGCGTGAACTGCGCGCTTCTCGTCTGtc > 1:199904/1‑142 (MQ=255) tttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGt < 1:257185‑M2/119‑1 (MQ=255) gaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc < 1:816982‑M2/122‑1 (MQ=255) gaagacgacgacggcctgcagCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACGCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc < 1:587506‑M2/122‑1 (MQ=255) cgacgacggcctgcatCTCCTTCTTCTTCTTCGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGCGCGTGAACTCCCCCCTTCTCGTCTGTATCgtagg > 2:153663‑M2/17‑141 (MQ=255) gacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTg < 2:472391‑M2/131‑1 (MQ=255) ccggcctgcctCTCCTTCTTCTTCTTTGAAGATGCGGAAGTTCACGCCGGTAACGCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGc < 2:824473‑M2/132‑1 (MQ=255) tgcatCTCCTTCTTCTGCTTTGAGGAGGCGGAAGATCCCGCCGGTTACTCCTCTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAg < 2:250412‑M2/138‑1 (MQ=255) | ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAT‑GGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG > NC_000913/4001510‑4001787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |