| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,375,828 | IS186 (+) +4 bp | coding (132‑135/963 nt) | menC ← | O‑succinylbenzoyl‑CoA synthase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2375828 = | 0 (0.000) | 20 (0.720) | 18/276 | 0.6 | 100% | coding (135/963 nt) | menC | O‑succinylbenzoyl‑CoA synthase |
| ? | NC_000913 | = 2515617 | NA (NA) | noncoding (1345/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 2375831 | 0 (0.000) | 27 (0.970) | 21/276 | 0.3 | 100% | coding (132/963 nt) | menC | O‑succinylbenzoyl‑CoA synthase |
| ? | NC_000913 | 2514273 = | NA (NA) | noncoding (1/1345 nt) | IS186 | repeat region | |||||
AGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCA > NC_000913/2515478‑2515758 | aGCCTACAGGTGGCCATGCGTGGGACAGTATCCCTGACAGCCTGCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATaa < 2:77789/143‑1 (MQ=9) tcATTGGTGGGACAGTGTCCCTGACAGCCTACAAAGCGCAAGTGAGGAACGCGAGGCATCGTCTTAACGAGGCAGCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGttttt < 1:87274/142‑1 (MQ=14) ccACTCGTGGGACAGTATCCCTGCCAGACTGCAGAGCGCAATTGCAGAGCGCGAGGCATCGGCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGttttt < 2:250051/143‑1 (MQ=14) cATTCGTGGGACAGTATCACTGACAGCCGACAAAACGCTATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACTCTTAAGTTAGCGCTTATGGGATAATTCCCCGGtttttt < 2:164163/143‑1 (MQ=255) agtCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGttttttt < 1:164798/141‑1 (MQ=255) aGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTaa > 1:201160/1‑143 (MQ=255) gCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGAGGGTTCAACCCTTAAGTTAGCGCTTCTGGGATCATTCCCCGGTTTTTTTACGCCTGCTACTCCGCTACTGGCt > 2:378331/1‑143 (MQ=14) aCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATCATCCCCCGGTTTTTTCACGCCTGTTCATCCGCTAACGGcctctg > 2:488918/1‑138 (MQ=14) cagagcGCAATTGAAGAACGCTAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCggg < 1:315533/138‑1 (MQ=255) cgatggaagtaCGGGAGGCATAGTCTTAACGAGGGACAGTGGTGTCGTATTCTTTTGGTGGTTGACCGCTGTAGTTAGCGCTTATGGGATAATTCCTCGGTTTTTTTACGCCTGTTAAGCAGCTAATGGCTGCGGGCG‑ACCaa < 2:132838/138‑1 (MQ=255) cAATTGAGGACCGCGAGGCATCGTGTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCaa < 2:217585/143‑1 (MQ=255) aTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGCCG‑ACCAATc > 2:495933/1‑143 (MQ=255) ttGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTGCAACGCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑AGCatgca > 2:1828/1‑139 (MQ=255) tGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAGTGGCTGCGGGCG‑ACCAATCaa < 1:399215/143‑1 (MQ=255) agaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGAGTTTTTACGCCTGTTAATCAGCTAATAGCT‑CGGGCGCACCCATCCAATa > 2:345276/1‑143 (MQ=18) aaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAGTCAAATAcc > 1:484911/1‑143 (MQ=255) gcgAGGCATCGTCGTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTGTTGACTCCTTTTAAGCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCtt < 1:331739/143‑1 (MQ=21) tCGTCTTAACGAGGCACCGAGGCGTCGCATTCTACAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGatat < 1:47323/143‑1 (MQ=255) gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCt > 1:205105/1‑143 (MQ=255) aCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTa > 1:416842/1‑143 (MQ=255) tCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTACTCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGCGCTTATGCAATAgc > 2:332865/1‑143 (MQ=255) ttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACTCCTGTTAATCAGCTACTGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCTATAGCGCctgcgg > 2:74494/1‑141 (MQ=255) aTGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTACTCAGCTAATGTCTGCGGTCG‑ATCAATCATATACCCTTGCAGATATTGCCCACTGGCCCTATCCATTCGCGCCTGCTCCTCtt > 2:279020/1‑143 (MQ=25) ggTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTGTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGc < 1:334040/143‑1 (MQ=255) ccttcggTTCGCGCTTATGGGATCATTCCCCGGTTTTGTTACCGCCGCTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATTCCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCTAc < 2:32988/137‑1 (MQ=255) ttAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCACTCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACaa > 1:103095/1‑143 (MQ=255) ttatctcTTATGGGATAATTCCCCGGTTTTGTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTCGCAGATATTGCACCACGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTcc < 1:386828/137‑1 (MQ=255) gcgcTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCcgcg < 1:98208/143‑1 (MQ=255) gcTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATCGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATTCACTACCGACTGATTTGGGTGTGTTTCGAACAGCTCCGCGAc > 2:366639/1‑143 (MQ=255) gATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACTAATCAAATACTCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAACCTACTCGACCACACTCa > 2:155091/1‑143 (MQ=255) gATAATTCCCCGGTTGTTTTACGCCTGTTAATCAGCGAATGGCTGCGGGCG‑ACCACTCAAATACCCTTGCAGATATTGCTCCCCGAGCTTATGCACTCGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCa < 2:519795/143‑1 (MQ=255) | AGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAATCAGCTAATGGCTGCGGGCG‑ACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCA > NC_000913/2515478‑2515758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |