| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,645 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001644 | 1 (0.050) | 20 (1.000) | 19/284 | 0.1 | 95.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001650 = | 1 (0.050) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NC_000913/4001510‑4001770 | aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGACGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcattct > 1:60667‑M1/1‑135 (MQ=255) tatCTTGTCGACCCGACCGACTGCGTGCGCCTGCGCGTACAATCTCAACTTGGCCAGAGCCTGTCATCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGTCGACGACGGCCTGCATctccttcttct < 2:350974‑M1/142‑12 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc < 2:46276‑M1/143‑25 (MQ=255) ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGCCATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttcacgatgcg > 1:194073‑M1/1‑118 (MQ=255) tGCGCGTAGTGTGTGAGCTTGGCCAGAGCCTGGCAACCGGCCCGGAACTGGAAGACATCGAGGCGTCGGCACGTTTCTTTGAAGACGACGACGGCGTGCATctccttgttcttctttgaagatgcggaagatcacgccggtaa < 2:273131‑M1/143‑43 (MQ=255) ggcgcgTACACTCGCAAGCTGGCCCGAGCCTGGCAACCCGCGCGGAACTAGAAGACGTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa < 2:273041‑M1/142‑43 (MQ=255) aaCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatt < 2:10708‑M1/143‑58 (MQ=255) gccgcggcctggcGTCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACCGCCTGCACctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccat < 2:294990‑M1/137‑64 (MQ=255) cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttattcattaaagatgaagaagaacacgccggtaactccactgtggcatttaccatccgtgatggtcgtct > 1:289730‑M1/1‑65 (MQ=255) gcccgCAACTTGAAGACATCGTAGCATCGGCACGTTTCTTTGAAGACGACTACGGCCTGCATttcttttttcttctttgaagatgcggaagatcacgccggtaaccccactgtggcatttaccatccgtgatggtcgtctgtt < 1:174292‑M1/143‑82 (MQ=255) tGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttcgaagctgcggaagatcacgccggcaaccccactgtgccatctaccatcccggatgctcgtctgtctcctccccg > 2:171291‑M1/1‑53 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatctgtgattgtaaactgtttactctgcgtgagcgtg > 1:5328‑M1/1‑45 (MQ=255) cGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATcttcttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:359505‑M1/143‑101 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgactgtatactctgagagagcatgaactacacgcat > 1:347562‑M1/1‑33 (MQ=255) cGTTTCTTTGAAGGAGACGACGCCCTGC‑‑‑‑‑CTCTCCTTCTTCTTCTTTGACGATGCGGAAGATCACGCCGGTAACTCCTCTGTGGTATTTACCATCCGTGATGGTCGTCTGTTTTCTCTGCGTGAGCGTGTACTGCCCGCTTTTc < 2:280092/143‑1 (MQ=255) tttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcgggtaaccccacggtggcgtttaccatccgtgatggtcgtctgtttactctgcgtgagcgtggtctgcccgccgttcgg > 2:83226‑M1/1‑28 (MQ=255) ttCTGTGAAGGCGACGACGGCCTGCATgtccttcttcttcttggaagatgcggaagagcacgccggtaactccacttgggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc < 2:351671‑M1/143‑117 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggcagtctgtttactcgccgtgagagtgaactgcccgcgtctcgcctgt > 2:316668‑M1/1‑24 (MQ=255) gAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgtcggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc < 1:281678‑M1/143‑123 (MQ=255) ggcgacgacggcCTGCATttctttgtttttctttgaagattcggaagattacgcgggtaactccactgtgggatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta < 1:158527‑M1/141‑126 (MQ=255) acgacgacgGCCTGCATctccttcttcttctttgatgatgcggaagatcactctggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 1:235620‑M1/143‑127 (MQ=255) | ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NC_000913/4001510‑4001770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |