| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,755,755 | IS5 (+) +4 bp | coding (58‑61/1413 nt) | pykF → | pyruvate kinase I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 43 (1.060) | 34/284 | 0.2 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 1755755 = | 0 (0.000) | coding (58/1413 nt) | pykF | pyruvate kinase I | |||||
| * | ? | NC_000913 | = 1755758 | 0 (0.000) | 27 (0.670) | 23/284 | 0.9 | 100% | coding (61/1413 nt) | pykF | pyruvate kinase I |
| ? | NC_000913 | = 2102943 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATA > NC_000913/2102810‑2103084 | ctctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCt < 2:414792/143‑1 (MQ=32) ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTaa < 2:386126/143‑1 (MQ=34) ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTaa < 2:21806/143‑1 (MQ=34) ctTTTCTGGGCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTaa < 2:454779/143‑1 (MQ=21) cTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACAAGATCACATATCAGGGACTCGTTCGCACCT‑TCCTTAATCcctaacctaa > 2:118625/1‑143 (MQ=255) ggCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAAt < 1:574430/143‑1 (MQ=255) tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAACAAAATCAGa > 2:77848/1‑143 (MQ=255) tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGaaa > 1:557657/1‑143 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTCG‑ACGCTTCTGGGGTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAAt > 1:167692/1‑143 (MQ=17) gCGGAGGTAAGTTGATGACTCATGATGAACCCTGTTTTGTGGCTAGAGATGACAAACATGATCTCATATTAGGGACTTGTTCGCACCT‑TCCTTAATCTCTAACATAAATGAAACAATAGCATCCGAACGAACAGGAAATTTTc > 2:327763/1‑143 (MQ=17) gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTAATAGCATGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAACTTTc > 1:104017/1‑143 (MQ=255) aGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTAc < 2:285134/143‑1 (MQ=255) aaGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaa > 2:588727/1‑143 (MQ=255) ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCCAACATAAATGACACACTAAAATCAGAAAGCACCGGAAATTTTCTTCCGGaataa > 2:263002/1‑143 (MQ=255) gatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATc > 1:468043/1‑143 (MQ=255) tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATGAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATCAATGGCCCACTAAAATCGGAAAGCACAGGAAATTTGCGTACGGAATAATCATGTaa > 1:611116/1‑143 (MQ=21) tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACGCAATAAAATCAGAAAGCACATGAAATTTTCTTACGGAATAAGCATGTaa > 1:442995/1‑143 (MQ=255) aCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGAATTCGc > 2:479527/1‑143 (MQ=255) gTTCTATGCCTCCAGATGACAAACATTGTCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCTTATCATAAATGACACAATAAAAGCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAt < 1:586833/143‑1 (MQ=37) gaTGGCTCCAGATGACAAACATGATCTCATATCAGTGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGAAACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCg < 1:276563/142‑1 (MQ=255) aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTCACATACATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAAACATGTACAGATTTCGCTTCATCTCgg > 1:234608/1‑143 (MQ=255) gCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAAc > 2:237221/1‑143 (MQ=255) tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAg < 2:299738/143‑1 (MQ=255) tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCCTCATCTCGTAACAg > 2:434209/1‑143 (MQ=255) ccAGACTACACACCTCATCTCCTATCAGGTACTTGTTCGCACCT‑TCCTTAATCCCTAACCTAACTGACACAACAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAgg < 2:513948/143‑1 (MQ=255) aGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACACTAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATAATCTAAAGATTTCGCATAATCTCGGAACAgaaa > 2:202631/1‑140 (MQ=37) tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATaa < 1:552640/143‑1 (MQ=255) gACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAAt < 1:179154/143‑1 (MQ=255) aaaCATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATACTgca > 2:479352/1‑141 (MQ=255) aaaCATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTa > 1:348168/1‑143 (MQ=255) gATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTaaaa < 2:167692/143‑1 (MQ=255) tctcATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGACCAGGCATAATGTACTAAAAGc > 1:278479/1‑143 (MQ=255) atatCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATaa > 2:527182/1‑143 (MQ=255) atCAGGGACTTGTCCGCACTT‑GCCTTACGCCCTAGCATAAATGACACAATAAGATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTACAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACg < 2:254277/143‑1 (MQ=255) gggACTTGTTCGCACCT‑TCCTTAATCCCTAACATAGATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAAACATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTa < 2:558308/143‑1 (MQ=255) tCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAACATCAGAAAGCACAGGAAATTTTCTTACGGCATACTCATGTAAAGATTTCGCTTCATCTCCGAACAGGCATAATGTACTACACGCACAACGCTTCCTTTCGACa > 2:82765/1‑143 (MQ=255) gCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACata > 2:242712/1‑143 (MQ=255) t‑tccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTaa < 1:308854/143‑1 (MQ=255) t‑tccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTaa < 1:77848/143‑1 (MQ=255) ccttACTCCCTAACATCCATGAATCAATTATATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAata < 2:669602/143‑1 (MQ=255) ccttAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAATATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAata < 1:488176/143‑1 (MQ=255) | CTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCT‑TCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACATATTTAATA > NC_000913/2102810‑2103084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |