Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,375,828	IS186 (+) +4 bp	coding (132‑135/963 nt)	menC ←	O‑succinylbenzoyl‑CoA synthase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2375828 =	1 (0.020)	56 (0.880)	47/274	0.3	98.2%	coding (135/963 nt)	menC	O‑succinylbenzoyl‑CoA synthase
	?	NC_000913	= 2515617	NA (NA)					noncoding (1345/1345 nt)	IS186	repeat region
*	?	NC_000913	= 2375831	1 (0.020)	73 (1.140)	61/274	0.0	98.6%	coding (132/963 nt)	menC	O‑succinylbenzoyl‑CoA synthase
	?	NC_000913	2514273 =	NA (NA)					noncoding (1/1345 nt)	IS186	repeat region

AAGGCCTGAATGAAGAGCAAGGTAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACG  >  NC_000913/2514132‑2514407                                                                                                                                               |                                                                                                                                       aatgCCTGAATGAAGCGCAAGGTACCGTGATTCCGTCTC‑GCGGGCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTc                                                                                                                                       <  2:243788/140‑1 (MQ=255) aaGGCCTGAATGAAGAGCAAGGTAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTCTAAGACCATACCTCAAAAAGCCGGGGATAAGTc                                                                                                                                       >  2:663812/1‑143 (MQ=255)  agcccTGGATGAAGAGCGAGGTAACGTCGTTTC‑TCCCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTcc                                                                                                                                      <  2:349694/140‑1 (MQ=255)   ggCCGGAATGAAGCGCAAGGTAACGTGGTGTC‑TCGGTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTccc                                                                                                                                     <  2:778700/143‑1 (MQ=255)       tgaatgaaGAGCAAGGTAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATaa                                                                                                                                 <  1:29943/143‑1 (MQ=255)        gaatgaaGAGCAAGGTAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAg                                                                                                                                >  1:721660/1‑143 (MQ=255)        gaatgaaGAGCAAGGTAACGGGGGTTC‑TCGCGGCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAg                                                                                                                                <  1:290237/143‑1 (MQ=255)         aatgaaGAGCAAGGTAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAgc                                                                                                                               <  2:321765/143‑1 (MQ=255)            gaaGAGCAAGGTAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCGTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATAGATAAAAAAGCCGGGGATAATTCCCATAAGCGCt                                                                                                                            >  1:996993/1‑143 (MQ=255)              agagCACGGGACCGTGGTTTC‑TGGCGCCGGGCCGAAGCGGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGGGCTGTAAGACCATACATAAAAAAGCCGGGGATAAGTCCCATAAGCGCTaa                                                                                                                          <  1:368909/143‑1 (MQ=255)                    aGGTAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAg                                                                                                                    >  1:899277/1‑143 (MQ=255)                    aGGTAACGGGGTTTC‑TCGCTGCGGTCTGAAGCGGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCGGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAg                                                                                                                    <  2:269596/143‑1 (MQ=255)                       tAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTGACGGGt                                                                                                                 >  2:954408/1‑143 (MQ=255)                             ggTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGt                                                                                                           >  2:164625/1‑143 (MQ=255)                             ggTTTC‑GCGCTTCGGTCTGAAGCTGGTTTACGGCTCTGCCCTGGTGAGTGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGt                                                                                                           <  2:504701/143‑1 (MQ=255)                                   gccGCTGCGGTCCGACGCTGGTCTACGGCACTCCCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGGGCTGTAAGTCCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc                                                                                                      <  1:635972/141‑1 (MQ=38)                                    tcGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGCTGTGGTGTTGCg                                                                                                     >  1:1147494/1‑143 (MQ=255)                                    tcGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATAGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACg                                                                                                     >  1:940896/1‑143 (MQ=255)                                     cggtccGGTCTGTAGCTGGTTTACGGCTCTACCCTGGTGAGGGTGCTGTCGGCGTCAACCGCAGCACTGGTTCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                    <  2:764907/138‑1 (MQ=38)                                     cGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                    >  1:880249/1‑143 (MQ=255)                                       cTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTGAGACCATACATAAACAAGCCGGGGATAATTCCCATACCCCCTCACGTAAAGGCTGCGGTATCACCCCt                                                                                                  >  1:736324/1‑143 (MQ=255)                                        ttCGGTCTGATGCTGTTTTAGGGTTTTGTCTTGGTGGGTGTGGTGGGGGGGTCAATGGCAGCACTGGTGGTGAAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg                                                                                                 <  1:1005770/143‑1 (MQ=21)                                             tCTGAAGCTGGTTTACGGCTCTGCCCTGGTGAGTGTGCGGTCGGCGTCAATCGCAGCACTGGTGCTATCAGAACATACATCAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATCACGCCTGATATg                                                                                            >  2:321771/1‑143 (MQ=37)                                             tCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCGGTAGGACCATACATCAAAAAGCCGGGGATAATTCCCCTAAGCGCTCACTCCAGGGGTGTGGCATTACGCCCGatatt                                                                                            >  2:297468/1‑142 (MQ=255)                                               tGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAt                                                                                          >  1:343075/1‑143 (MQ=255)                                                 aaGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTCAGGGGTGTGGTATTACGCCTGATAGGAttt                                                                                        >  2:111583/1‑143 (MQ=255)                                                 aaGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATCTGAttt                                                                                        >  2:797891/1‑143 (MQ=255)                                                   gCTGGTTTAGGGCTCGTCCCTGGTGAGGGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa                                                                                      <  2:1020417/143‑1 (MQ=37)                                                     tGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTCAGACCCTACATAGAAAAGCCGGGGATAAGTCCCATAAGCGCTAACTTACGGGTCGAGGGAGCACGCCCGCAATGAGTTAAca                                                                                    >  2:1157477/1‑142 (MQ=255)                                                     tGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACg                                                                                    <  1:842538/143‑1 (MQ=255)                                                     tGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACg                                                                                    >  2:328921/1‑143 (MQ=255)                                                      ggTTGACGGGTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAATACCATACATAAAAGAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGTGTTGTGGTATTATGCCTGATATGATTTAACGt                                                                                   <  2:1093206/143‑1 (MQ=37)                                                       gTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGGCCATACCTAAAAAAGCCGGGGCTAATTCCCATAAGCGCTAACTTAAGGCACGTGGTATTAAGACTGATAGGATTTAACGta                                                                                  >  2:105004/1‑142 (MQ=38)                                                        tttACGGCTCTACCCTGGGGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc                                                                                 <  1:945736/143‑1 (MQ=255)                                                        ttgaCGCCTCTCCCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc                                                                                 <  2:811382/140‑1 (MQ=255)                                                         ttACGGCTCTACCCTGTTGATTTTGTTTTCTGCGTCAATCGCAGCACTGGTGCGGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGcc                                                                                <  1:663157/143‑1 (MQ=25)                                                          tACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg                                                                               <  1:1096250/143‑1 (MQ=255)                                                           aCGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGa                                                                              <  1:562066/143‑1 (MQ=255)                                                            cGGCGCGACCCTGGTGAGTGTGGTGGCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAt                                                                             <  2:1077275/143‑1 (MQ=255)                                                             ggCTCTACGCTGGTGAGTGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGAGAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATg                                                                            <  2:1100068/143‑1 (MQ=255)                                                              gCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATGACGCCTGATATGATTTAACGTGCCGATGa                                                                           >  1:700553/1‑143 (MQ=255)                                                                    cccTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATAATTTAACATGACGATGAATTaat                                                                     >  1:307347/1‑141 (MQ=255)                                                                    cccTGGTGAGTGTGCTGTCGGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCTCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAct                                                                     <  1:550778/143‑1 (MQ=255)                                                                     ccTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActc                                                                    >  1:1121842/1‑143 (MQ=255)                                                                     ccTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGCTGTGGTATTACGCCTGATATGATTTGACGTGCCGATGAATTAccc                                                                    >  2:702903/1‑141 (MQ=255)                                                                          tGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATGAGCTTAGTCGCTAACTTAAGGGCTGTGAATATAGGCCGTAAATGATTTCAGTAGTCTATGAATTACTCTCACg                                                               >  1:264533/1‑143 (MQ=255)                                                                              tgtgCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATaa                                                           <  1:294191/143‑1 (MQ=255)                                                                                 gCTGCCTGCCTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTg                                                        <  2:884563/143‑1 (MQ=255)                                                                                  cTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTCACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAGTTACTCTCACGATAACTgg                                                       >  1:278702/1‑143 (MQ=255)                                                                                   tGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                                                      <  1:409674/143‑1 (MQ=255)                                                                                   tGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGt                                                      <  1:134578/143‑1 (MQ=255)                                                                                     tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGCTAACTGGTCa                                                    >  1:1084175/1‑143 (MQ=255)                                                                                     tCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCa                                                    >  1:1089283/1‑143 (MQ=255)                                                                                      cTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAg                                                   <  1:777529/143‑1 (MQ=255)                                                                                       tGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                    <  1:605937/93‑1 (MQ=255)                                                                                       tGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc                                                                                                    >  2:605937/1‑93 (MQ=255)                                                                                       tGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGc                                                  >  1:363134/1‑143 (MQ=255)                                                                                           gcgctCGCGGGACTGGTGATGTAAGACCATACATAAAAGAGCCGGGGATAATTCCCATAAGCGCTAACCGAAGGTTTGTGGTATTACGGCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAtt                                              <  2:551286/139‑1 (MQ=17)                                                                                             aattacagcaCCAGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTACGGGTTGTGGTATTACGCCTGATATGAATAAACGTGCCGACGAATCACCCTCACGATAAACGGTTGGCACTTCt                                            >  2:588378/6‑143 (MQ=18)                                                                                              aTCGCAGCACTGGAGCTGTAAGACCATACATAAAAAAGCCGGGGATAACTCCCAAAAGCCCTAACTTAAGGGCTGTGGTATAAAGCCTGATAAGATTTAACGAACCGATGAATTACTAACACGATAACTGGACAGCaacacga                                           >  2:100206/1‑138 (MQ=255)                                                                                              aTCACAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGAGGTATGACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTg                                           <  1:935218/143‑1 (MQ=255)                                                                                                cGCAGCACTGGCGCTGTACGACCACACATAAAAAAGCCGGGGATTATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTCACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGc                                         <  2:864117/143‑1 (MQ=17)                                                                                                 gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGGGCGAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAGTTACTCTCACGATAACTGGTCAGCAATTCTGGcc                                        >  1:517463/1‑143 (MQ=255)                                                                                                 gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGcc                                        <  2:343075/143‑1 (MQ=255)                                                                                                 gcagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAAGTCTGGcc                                        >  1:517243/1‑143 (MQ=255)                                                                                                  cagcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTGAGTGTCGTGGTATTACGCCTGATATGATTTAACGTGCCGATGCATTACTCTCACGGTAACTGGTCAGCAATTATGGcac                                       >  2:576626/1‑141 (MQ=18)                                                                                                   agcaCTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCa                                      >  1:1015401/1‑143 (MQ=255)                                                                                                          gTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGt                               >  2:869019/1‑143 (MQ=255)                                                                                                               gTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGcc                          >  1:932780/1‑143 (MQ=255)                                                                                                                gaaGACCAGACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGccc                         <  1:113266/142‑1 (MQ=255)                                                                                                                   gACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGACGgaa                      >  1:196049/1‑143 (MQ=255)                                                                                                                      catacataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCgaagaa                   <  1:164625/143‑1 (MQ=255)                                                                                                                       agacataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAAc                  <  2:489588/141‑1 (MQ=255)                                                                                                                        tacataAAAAGTCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTTGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt                 <  2:722170/143‑1 (MQ=255)                                                                                                                        tacataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt                 <  1:839279/143‑1 (MQ=255)                                                                                                                        tacataAAAAAGCCGGGGATAATGCCCATAAGCGCTAACTTAAGTGTTGTGGTAGTACGCCTGATATGATGGAACGGGCCGAGGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACt                 <  1:292547/143‑1 (MQ=14)                                                                                                                         acataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATGTAACGTGCCGATGAATTACTCACCCGATAACTGGCCAGCACTTCTGGCCCATATTGGTAAGCCCGAAGCACTg                >  2:897358/1‑143 (MQ=14)                                                                                                                           ataAAAAATCCGGGGACACTTCCCATAACCGCCAGCTCAAGGGTCGTGGTATTACGCCGGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa              <  1:47442/143‑1 (MQ=14)                                                                                                                           ataAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGa              <  1:1031359/143‑1 (MQ=255)                                                                                                                             aaaaaaGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATa            >  1:592421/1‑143 (MQ=255)                                                                                                                               aaaaGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACt          >  1:893926/1‑143 (MQ=40)                                                                                                                               aaaaGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGAGATGATTTAACGTGCCGATCAATTACTTTTTCGATAAATGGTCAACATTTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACt          >  1:1056888/1‑143 (MQ=14)                                                                                                                                   gCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCACTTCCGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCgg      <  1:328921/143‑1 (MQ=25)                                                                                                                                    ccGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGc     >  1:922016/1‑143 (MQ=37)                                                                                                                                     tggggATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCa    >  2:791646/2‑143 (MQ=21)                                                                                                                                      ggggATAATTCCCATGAGCGCGAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCAc   <  1:797891/143‑1 (MQ=21)                                                                                                                                      ggggATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTACGCCCGAAGAACTGGATACTTCGGCAc   >  1:767047/1‑143 (MQ=25)                                                                                                                                       gggATAATTCCCATACGCGCTAATTTAAGGGTTGTGGTATTACGTCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACg  <  2:338237/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                       AAGGCCTGAATGAAGAGCAAGGTAACGTGGTTTC‑TCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAAGACCATACATAAAAAAGCCGGGGATAATTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACG  >  NC_000913/2514132‑2514407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.