Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,375,828 IS186 (+) +4 bp coding (132‑135/963 nt) menC ← O‑succinylbenzoyl‑CoA synthase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2375828 =0 (0.000)58 (1.250) 46/274 0.1 100% coding (135/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 = 2515617 NA (NA)noncoding (1345/1345 nt) IS186 repeat region
* ? NC_000913 = 23758310 (0.000)46 (0.990) 40/274 0.2 100% coding (132/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 2514273 = NA (NA)noncoding (1/1345 nt) IS186 repeat region

TGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCA  >  NC_000913/2515488‑2515758
                                                                                                                                 |                                                                                                                                              
tGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGtt                                                                                                                                   >  2:705710/1‑143 (MQ=38)
   gcATTCGTGGGACAGGATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGttttt                                                                                                                                <  2:536074/142‑1 (MQ=255)
     atgcGTGGGACTGGATCCTTGACGTCGTACAAAACGCAATTGAAGCTAGGCATGCATCGTCTTCGCGACCCACCGGGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGttttttt                                                                                                                              <  2:181786/140‑1 (MQ=14)
     aTTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGttttttt                                                                                                                              >  1:300610/1‑143 (MQ=255)
      ttCGTGGGACAGTAGCGCTGACAGCCTACAAAACGCAAGTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTa                                                                                                                             <  2:205247/143‑1 (MQ=255)
        cGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTCGCGCTTATGGGATAATTCCCCGGTTTTTTTACg                                                                                                                           >  1:635217/1‑143 (MQ=255)
        cGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACg                                                                                                                           <  1:705710/143‑1 (MQ=255)
          tGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGttttttttacgc                                                                                                                         >  1:524116/1‑138 (MQ=255)
              aCAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGACGCATCGTCTTAACGAGGCACCGAGGCGTCGCCTTCACCAGATGGTTCAACCCTTAAGTGAGCGCTTATGGGATAAAGCCCCGGGTCTTTTACGCCGGtt                                                                                                                     >  2:10700/1‑143 (MQ=14)
               cAGTATCCCTGACCGCCCTCAAAACCCAATTGTAGCGTTCCACGCTGCTGCTTAACGAGGCACCGAGGCGACGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTa                                                                                                                    <  1:624160/143‑1 (MQ=17)
                        tGACAGCCTACAAGACGCAATGGAAGATCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTaa                                                                                                          <  2:587524/143‑1 (MQ=255)
                          aCAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCCTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGCTAATTCCCCGGTCTCTTTCCCCCTGTTCCT‑CAGCtcccg                                                                                                        >  2:322291/1‑139 (MQ=14)
                              ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTg                                                                                                    >  2:193293/1‑143 (MQ=255)
                                tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCg                                                                                                  >  2:716128/1‑143 (MQ=255)
                                  cAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCggg                                                                                                >  1:719686/1‑143 (MQ=255)
                                         cAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTGACGCCGGTTCAG‑CAGCTAATCGCTGCGGGCGAccca                                                                                         >  2:72790/1‑141 (MQ=18)
                                          aaTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAAt                                                                                        >  1:443817/1‑143 (MQ=255)
                                          aaTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACAAAt                                                                                        >  1:760998/1‑143 (MQ=255)
                                            ttGAAGCACGCGAGGCATCGTCTTACCGAGGCACCGAGGCGTCGAATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCa                                                                                      <  1:615341/143‑1 (MQ=255)
                                            ttGAACACCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTGAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCa                                                                                      <  1:38008/143‑1 (MQ=255)
                                             tGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATTGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCaa                                                                                     <  2:118003/143‑1 (MQ=255)
                                              gtgtaaCGCGAGGCAGCGTCTTAACGAGGGACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCaaa                                                                                    <  2:590028/139‑1 (MQ=255)
                                              gaagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCaaa                                                                                    <  1:88926/143‑1 (MQ=255)
                                               aagaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTTCGGCCGGTAATCCACCTAATGCTGGGGGGCGCCCAATCaat                                                                                    >  1:701008/1‑142 (MQ=14)
                                                agaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATa                                                                                  <  2:279342/143‑1 (MQ=255)
                                                      cgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCCATCAAATACCCTTg                                                                            >  1:688724/1‑143 (MQ=255)
                                                         ggCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAg                                                                         <  2:87348/143‑1 (MQ=255)
                                                         ggCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAg                                                                         <  2:91335/143‑1 (MQ=255)
                                                          gCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGCTATATTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGa                                                                        <  1:495610/143‑1 (MQ=255)
                                                              ccagagaaCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATAtt                                                                    <  1:579340/137‑1 (MQ=255)
                                                                 cTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCa                                                                 <  2:440204/143‑1 (MQ=255)
                                                                 cTTAACGAGGCACCGAGGCGGCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCa                                                                 <  2:365898/143‑1 (MQ=255)
                                                                    aaCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCCGATATTGCAccc                                                              >  2:470413/1‑143 (MQ=255)
                                                                      cgcagCACCGAGCCGTCGCATTCTGCAGATAGTTCAACCCGTAAGTTAGCGCTTATGGGATAAGTCCCCTGTCTCTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCg                                                            <  2:157123/139‑1 (MQ=255)
                                                                       gAGGCACCCAGGCGTCGCACGCTTCAGATGGTTCAACCCTCAAGTTACGAATGAGGTGCTCCAACCCCAG‑GTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGCGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAg                                                          <  2:838115/143‑1 (MQ=255)
                                                                        aGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAg                                                          <  1:838903/143‑1 (MQ=255)
                                                                          gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCCATCCAATACCCTTGCAGTTCTTGCCCCGCGCGCt                                                        >  2:753749/1‑143 (MQ=25)
                                                                            aCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTATTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGAGCCTAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTa                                                      >  2:345454/1‑143 (MQ=255)
                                                                              cGAGGCGTCGCATTCTTCAGATGGTTCAACCCGTAGGTTGGCGCACACAACATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATg                                                    <  1:193293/143‑1 (MQ=38)
                                                                                 ggCGTCACATTCTTCAGATGGTTCAACCCTTCCGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGCCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCaa                                                 <  2:314661/143‑1 (MQ=255)
                                                                                   cGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCGCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATa                                               <  2:250186/143‑1 (MQ=255)
                                                                                   cGTCGCATTCTTCAGATGGTTCAACAAATAAGAGAGCGCGTATGGGAGAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATa                                               <  1:230491/143‑1 (MQ=255)
                                                                                     tCGCATTCTTCAGATGGTTCAACCCTTAGGTTAGCGCTTAGGGGATAATGCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAgc                                             >  1:862922/1‑143 (MQ=255)
                                                                                     tCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAgc                                             <  1:675093/143‑1 (MQ=255)
                                                                                         aTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACCCCTGTTAAT‑CCGCTAATGGCTGCGGCTAACCACCCACATACCCTTGCAGATACTTCCCCCGGTGATTACGCAATATCGCct                                         >  2:174760/1‑143 (MQ=21)
                                                                                             ttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCTTGTTAAT‑CAGCTAATGGCTGCGGTCGATCAATCAAATACTCTTGCAGATATTGTAATCCGTACTTTTCCACTAGCGCcttgtg                                     >  2:732192/1‑139 (MQ=25)
                                                                                             ttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTCTTTTACGCCTGTTAAT‑CGGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATACCACctgctg                                     >  2:535141/1‑143 (MQ=255)
                                                                                               cAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGAc                                                                                            >  1:422256/1‑86 (MQ=255)
                                                                                               cAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTGTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGAc                                                                                            <  2:422256/86‑1 (MQ=255)
                                                                                                aGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgctgccg                                  >  2:494098/1‑141 (MQ=255)
                                                                                                  ctGGCTCAGCCCTTACGTAAGCGCGTATGGGATACTCCCCCGGTTGTTTTACGCCTGTTAAG‑CAGCGAATGGCTGTGGGCGACCAACCAAATACCCCTGCCGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGtt                                <  1:772863/142‑1 (MQ=255)
                                                                                                  aTGGTTGAACCACTAAGTTAGCGCGTATGGGATACTTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATCGCGCCTGCTGCTGtt                                <  1:361625/143‑1 (MQ=255)
                                                                                                          aCCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCg                        <  1:45846/143‑1 (MQ=255)
                                                                                                             cTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCTTGTTAAT‑CAGCTAATGACTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCAGTCCTACCTTATGGAATAGCGCCTGCTGCCGTTGCCTCTCcaca                     >  2:513455/1‑143 (MQ=255)
                                                                                                              ttAGGTTAGCGCTCATTGGAGGATTGCCCGGGTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGTGGGCTACCAATCAAATACCCTTGCAGATATTGCACCCCTAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACaa                    <  1:752250/143‑1 (MQ=255)
                                                                                                               caaGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACaaa                   <  1:564464/142‑1 (MQ=255)
                                                                                                                   ttAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGCCACACTcc               >  1:533073/1‑143 (MQ=255)
                                                                                                                    tAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgctg                                     <  1:39035/120‑1 (MQ=255)
                                                                                                                    tAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCctgctg                                     >  2:39035/1‑120 (MQ=255)
                                                                                                                     attgcTTATGGGATAATTCCCCGGTTTGTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCcgc             <  2:635217/140‑1 (MQ=255)
                                                                                                                              gggATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCacacc    >  2:628153/1‑142 (MQ=255)
                                                                                                                                gATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCa  >  2:163364/1‑143 (MQ=255)
                                                                                                                                 |                                                                                                                                              
TGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGATAATTCCCCGGTTTTTTTACGCCTGTTAAT‑CAGCTAATGGCTGCGGGCGACCAATCAAATACCCTTGCAGATATTGCACCCCGAGCTTATGCAATAGCGCCTGCTGCTGTTGCGTCTCGACAAACTCCGCGACCACACTCA  >  NC_000913/2515488‑2515758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.