| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 71 (1.400) | 53/282 | 0.0 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 64 (1.260) | 38/282 | 0.3 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
Only 100 of 119 total aligned reads displayed.
GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATT > NC_000913/1979344‑1979627 | tggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc < 1:909489‑M1/1‑1 (MQ=255) ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt < 1:51546‑M1/2‑1 (MQ=255) caaAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACCACAAACt > 1:721494/1‑143 (MQ=255) gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa < 2:593150‑M1/3‑1 (MQ=255) ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:607852‑M1/140‑143 (MQ=255) aaaaGGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 2:345404/143‑1 (MQ=255) gataacgccttaagtggcgaagaaacggtctaaataggctgatccaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgacatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt > 2:791911‑M1/139‑143 (MQ=255) gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt < 2:72464‑M1/5‑1 (MQ=255) acatcgccataaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 2:930175‑M1/138‑143 (MQ=255) cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcagagaagaatttccccgcttattcgcaccttccCTCattacat < 2:383939‑M1/10‑4 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa > 1:767464‑M1/133‑143 (MQ=255) cAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgc > 1:641717‑M1/1‑134 (MQ=255) aGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGCCACTTACCGCACAACAAACTAAggaaggtgcg > 2:536027‑M1/1‑133 (MQ=255) aGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcg < 1:229558‑M1/143‑11 (MQ=255) taaatggcgaagaaacggtctaaacaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaa > 2:639107‑M1/129‑143 (MQ=255) tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagcaatgaaatgactgagtcagccgagaagaatttccccgcttattcgccccttccCTAATTAAATACaaagaaa < 1:649022‑M1/19‑1 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAgg < 2:90162‑M1/21‑1 (MQ=255) cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGc < 2:877934‑M1/22‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgcgaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAAGca < 1:229372‑M1/23‑1 (MQ=255) gaagaaacgcgctaaataggctgatccaaggcatttacgggagaaaaaatcggcacaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca > 1:346624‑M1/121‑143 (MQ=255) aagaaacggtctaaataggctgattcaaggcagttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaa > 2:255594‑M1/120‑143 (MQ=255) aaaTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccct < 1:552399‑M1/143‑22 (MQ=255) aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagcatttccacgcttattcgcaccttccCTCACTAAATACAAAGAAAggcaacca < 2:257831‑M1/27‑3 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcgCTAATTAAATACAAAGAAAGGCAACAATCAAc < 1:283991‑M1/32‑1 (MQ=255) tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcgCTAATTAGATACAAAGAAAGGCACCAATCAACt < 1:598159‑M1/33‑1 (MQ=255) ttGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaattcactgagatgatct > 1:123204‑M1/1‑112 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaat < 1:342303‑M1/37‑1 (MQ=255) ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatg > 2:755237‑M1/106‑143 (MQ=255) aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCCACAATCAACttaatgtt < 1:455424‑M1/40‑1 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATCATCCCTTTCATGCAATACCAGATAAGCTAGTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:883920‑M1/143‑39 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaagctgcgaacaagtccctgatatgagaccacgtttgtc > 2:305314‑M1/1‑102 (MQ=255) attcaaggcatttacgggagcaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccccgacgaatttccccgcttattcgcacctcccCCAACTAAATACAAAGAAAGGCAACAACCaccttcatgtcaatcac < 2:254536‑M1/46‑4 (MQ=255) aaTAACGCACGGTAAATAATAATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct < 2:176163‑M1/143‑46 (MQ=255) aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttacccgcttattcgcaccttccCTAATTAAATACAACGAAAGGCAACAATCAACTTAATGTTAATGAAATGt < 2:512543‑M1/50‑1 (MQ=255) ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGttt < 1:286280‑M1/52‑1 (MQ=255) agctcACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 2:70473‑M1/141‑49 (MQ=255) aCTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 1:790821‑M1/143‑50 (MQ=255) cACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca < 2:290033‑M1/143‑53 (MQ=255) cACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTCTCAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaccaagtccctgatatgagatcatgtttgtcatctggagcca < 2:157943‑M1/143‑53 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACat < 1:221183‑M1/57‑1 (MQ=255) tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAATACAAAGAACGGCAACAATCAACTTAATTTTAATGAAACGATTTACata < 2:734602‑M1/58‑1 (MQ=255) taaggaagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACata > 2:136667‑M1/86‑143 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTa < 2:467965‑M1/63‑1 (MQ=255) gagaaaaaatcggctcaaacataaagcaatgaaatgactgagacagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTa < 2:115319‑M1/63‑1 (MQ=255) gaaaaaatcggctcaaacatgaagaaatgaaatgactgcgtcagccgagaagaatttcctcgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc > 2:459191‑M1/79‑143 (MQ=255) gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc > 2:27886‑M1/79‑143 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAGCcag < 1:69861‑M1/68‑2 (MQ=255) catcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCGCAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatcgaacaggggtc > 2:346392‑M1/1‑78 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACtt > 1:90162‑M1/74‑143 (MQ=255) cTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAAAAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagctatagaacagggttcatc > 1:642791‑M1/1‑75 (MQ=255) cggctcaaacatgaagaaatgaaatgacttagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt > 2:400104‑M1/71‑143 (MQ=255) tcaaacatgaacaaatgaaatgactgagtcggctgcgaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTACCCACTTGTTTAAt < 2:867303‑M1/77‑1 (MQ=255) ataaataaTCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtgcagcatgag > 1:482505‑M1/1‑70 (MQ=255) aaataaTGACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 2:383007‑M1/143‑76 (MQ=255) aaataaTCCCTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtgccttatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 1:238417‑M1/143‑76 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCg > 1:593150‑M1/64‑143 (MQ=255) aacaatcacTTGCATGCAATACCCGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca < 1:572605‑M1/140‑77 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCgg > 1:569078‑M1/63‑143 (MQ=255) taatCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcccggatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc < 2:527694‑M1/143‑79 (MQ=255) cgtgaagaaacgaaatgactgagtcagccgagaagaacttccccgcttattcgcacctgccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGga > 1:858020‑M1/62‑143 (MQ=255) agcacTTCCATGTCATACCAGATCAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcacctggagccatagaacagggttcatcatgagtcatcaa < 2:332502‑M1/141‑81 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACACACTAAggaaggtgagaccaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcctccac > 1:174884‑M1/1‑62 (MQ=255) gcagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGaa > 1:792139‑M1/59‑143 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACGACTTGTTTAATGAGTAGAATCa < 2:93647‑M1/88‑1 (MQ=255) tttCGTGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAACCTAAggaaggtgcgaacaagtccctgatatgatatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 2:533265‑M1/143‑86 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 1:854008‑M1/1‑58 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTACTGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAg < 2:431663‑M1/89‑1 (MQ=255) cATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt > 2:110733‑M1/1‑55 (MQ=255) aTGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagacccgggttcatcatgagtcagcagattaccttc > 2:622305‑M1/1‑54 (MQ=255) gCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 2:382120‑M1/143‑92 (MQ=255) aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACt < 1:240947‑M1/95‑1 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaaagggttcatcataattcatcaacttacattcgccaac > 2:783885‑M1/1‑48 (MQ=255) aCCAGAGAAGCGATTGTGAAGCAGACACTTGCCGCACAACAAACTAAggaaggggcgaacaagtccctgatatgagatcatgtttgccatctggagccataggacggggtgcatcatgagtcatcaacttaccttcgccgaca < 2:416606‑M1/143‑97 (MQ=255) tagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGAAATACAAAGAAAGGCAACAAGCAACGTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCt > 1:847151‑M1/42‑143 (MQ=255) cAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcctgagtcatcaacttaccttcgccgccagt > 2:429093‑M1/1‑45 (MQ=255) taagtcgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTATATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTtat > 2:316587‑M1/39‑143 (MQ=255) aTAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAgaaaggtgcgaacaagtccctgatatgagatcatgtttgtcagctggagccatagaacagggatcatcatgagtcaacaacttaccttcgccgacagtgca > 2:625948‑M1/1‑42 (MQ=255) gCTGTTTTTAAAGAGACACTTTCCGCACAGCAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca < 2:641228‑M1/143‑106 (MQ=255) cTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatcagatcatgtttgtcatctggagccatagcacagggtgcatcatgagccatccacgtaccgtccccgacagagagtgcac > 2:770661‑M1/1‑37 (MQ=255) cTATTTTTAAACAGACACTTACCGCACAAAAAACTAAggaaggtgcgaacaagtcactgatatgagatcatgtttgtcatctggagacatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 1:62323‑M1/1‑37 (MQ=255) aagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACAtt < 2:57325‑M1/114‑1 (MQ=255) aagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACAtt < 1:322445‑M1/114‑1 (MQ=255) gaacttccccgcttatgcgcaccgtccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTg > 1:517349‑M1/28‑143 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa < 1:147667‑M1/119‑1 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa < 1:824942‑M1/119‑1 (MQ=255) tttccccgcttattcacaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTtgaca < 1:503050‑M1/119‑3 (MQ=255) tccccgcttattcgcaccttccCTAATTAACTACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAAtt > 1:72464‑M1/23‑143 (MQ=255) ccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATta > 1:9824‑M1/22‑143 (MQ=255) aaagcttattcgcaccttccCTAATTAAATACAAACAAAGGCAACAATCAACTTAATCTTAATGAAATGTATTCCATATAAAAACCACTTGCTTAATGCGGAGCATCAGTACACTATTATCTTATAATTACATTTGCAATtat < 2:162579‑M1/123‑1 (MQ=255) ctctttttcgctccttctCTAATTAAATAAAAAAAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAATCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTatat > 2:843511‑M1/19‑143 (MQ=255) cgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCTGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTatat < 1:883997‑M1/125‑1 (MQ=255) attcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCa < 2:215263‑M1/130‑1 (MQ=255) cGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagcccaga > 1:191089‑M1/1‑15 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTAGATATATTAACCACTTGTTTAATGCGGAGAATAAGTACACTATGTTATTATAATTACAGTTGAAATGAAATGATCACcga < 2:542595‑M1/134‑2 (MQ=255) accttccCTAATTAAGTACCACGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGa > 2:695583‑M1/8‑143 (MQ=255) acaggaactagggcaggtgcgaacagggccctgagatgagaccatcgttgtcatctggagccatagaacagcgttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag < 2:445502‑M1/138‑133 (MQ=255) ccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAg > 2:824942‑M1/7‑143 (MQ=255) ccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGAt > 1:196002‑M1/3‑143 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattccgcagtaagcgccgtcagaccagaacagagattt > 1:12261‑M1/1‑5 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt > 2:25264‑M1/1‑5 (MQ=255) | GCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATT > NC_000913/1979344‑1979627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |