Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 700,597 IS1 (–) +9 bp coding (990‑998/1221 nt) nagC ← N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 258675NA (NA)48 (0.950) 41/282 0.2 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 700597 = 0 (0.000)coding (998/1221 nt) nagC N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor
* ? NC_000913 = 7006050 (0.000)64 (1.260) 55/282 0.0 100% coding (990/1221 nt) nagC N‑acetylglucosamine‑inducible nag divergent operon transcriptional repressor
?NC_000913 = 1050545 NA (NA)noncoding (768/768 nt) IS1 repeat region

Only 100 of 112 total aligned reads displayed.

GTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCGGCTCTGGTA  >  NC_000913/700455‑700739
                                                                                                                                              |                                                                                                                                              
gcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacca                                                                                                                                                >  2:64549‑M2/143‑143 (MQ=255)
gTGATCCAGCTCAGAACGTGCCACCGGCAGATTAGTGCAAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTaa                                                                                                                                                <  1:505050/143‑1 (MQ=255)
 cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccaa                                                                                                                                               <  2:624163‑M2/2‑1 (MQ=255)
   aTCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTCTTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTACATa                                                                                                                                             >  2:190458/1‑143 (MQ=255)
        tgccggcggtggttttgccgttaggcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTg                                                                                                                                        <  2:266896‑M2/9‑1 (MQ=255)
        gtccggcggggcttttgcggttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTg                                                                                                                                        <  1:405075‑M2/9‑1 (MQ=255)
          tCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTCTTACTGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCCGTGATTTCACCGGCAATAACAATGTATTGCGGAGTAAATAAGTTGgg                                                                                                                                      >  2:16195‑M1/1‑141 (MQ=255)
          tCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATGTGTTGCGGATTAAATCAGTCGgg                                                                                                                                      >  1:342819‑M1/1‑141 (MQ=255)
          cggtcggtgttttgtccgagacgcaacacctcgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaagcagtaagttggcagcatcaccAATAAGTTGAt                                                                                                                                      <  2:65491‑M2/11‑1 (MQ=255)
           cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATa                                                                                                                                     <  2:78441‑M2/12‑1 (MQ=255)
           cggcggtgccgctgccgttacccaccaacccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaacttggcagcctcaccAATAAGTTGATa                                                                                                                                     <  2:717743‑M2/12‑1 (MQ=255)
           cAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACGGGCAATGACAATTTTTTGCGGATTAAATAAGTTGggt                                                                                                                                     >  1:344000‑M1/1‑140 (MQ=255)
                 tgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATg                                                                                                                               >  1:230227‑M2/126‑143 (MQ=255)
                 gTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATAGGCGGTGTTCATCTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgac                                                                                                                               >  1:212649‑M1/1‑134 (MQ=255)
                  gcttgtggcgttacgcaccacgcagtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATgg                                                                                                                              <  1:121258‑M2/19‑1 (MQ=255)
                    ccaccGGCAGATGAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactcc                                                                                                                            <  1:314771‑M1/143‑13 (MQ=255)
                       ccGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTGTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTACATAAGTCGggtaatgcctccaac                                                                                                                         >  2:370700‑M1/1‑128 (MQ=255)
                        cGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaact                                                                                                                        >  1:489547‑M1/1‑127 (MQ=255)
                        cGGCAGATTAGTGCGAAACGCAGTCAGCGGCTGGGTATTAATGCAGCGTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaact                                                                                                                        <  1:463865‑M1/143‑17 (MQ=255)
                          gCAGAGCAGTGCGAAACGCCTTCAGCGCCGGGGTATTAATGCAGCGTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaactta                                                                                                                      <  1:703632‑M1/143‑19 (MQ=255)
                           cAGAGTAGTGCGAAACGCCGTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttat                                                                                                                     <  1:744523‑M1/143‑20 (MQ=255)
                            ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGtttt                                                                                                                    <  2:671723‑M2/29‑1 (MQ=255)
                            aGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttatt                                                                                                                    <  1:544292‑M1/143‑21 (MQ=255)
                             tacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTa                                                                                                                   <  2:920609‑M2/30‑1 (MQ=255)
                             gATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGCGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAACAACAATGTTTTGCAGATTCACTAAGTTGggtaatgactccaccctatcg                                                                                                                   >  2:282581‑M1/1‑122 (MQ=255)
                               ttAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgat                                                                                                                 <  2:919042‑M1/143‑24 (MQ=255)
                                gagTGCGAAGCGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATACGTTGggtaatgactccaacttattgata                                                                                                                <  2:818324‑M1/142‑25 (MQ=255)
                                  aggcgtgacgccctcAGCGGTTGGCTATTCATGCAGCTTTCCAGAGCAGGGAGCAGCACTTTATCGACTTCAGTGAGTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagt                                                                                                              <  2:537136‑M1/136‑27 (MQ=255)
                                  accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcaccacaaaaacaccatcatacactaaatcagtaagctggcagcacccccACACAGTTGATAGCAATGGCGATGGGTTTACCCAg                                                                                                              >  2:430790‑M2/109‑143 (MQ=255)
                                     cGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgtt                                                                                                           <  1:552723‑M1/143‑30 (MQ=255)
                                     accccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATg                                                                                                           >  2:652867‑M2/106‑143 (MQ=255)
                                       cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATgac                                                                                                         <  1:362086‑M2/40‑1 (MQ=255)
                                        gacGCCGTCTGCGGCTGGGTATTAATGCAGCTTTCAATAGAAGGGAACAGCACTTTATCGGCTTCGGTGATTTGACCGGCAATAACAATTTTTTGCGGATTAAATAATTTGggtaatgactccaacttattgatagtgtttta                                                                                                        <  2:665579‑M1/142‑33 (MQ=255)
                                          cGCCTTCAGCGCCTGGGTATTAATGCACCTTTCCATAGCAGCGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatg                                                                                                      <  1:551814‑M1/143‑35 (MQ=255)
                                           gCCTTCAGCGCCTGGGTATTCATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgt                                                                                                     <  1:624581‑M1/143‑36 (MQ=255)
                                            ccTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATGACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgctgtatgtt                                                                                                    >  1:189777‑M1/1‑107 (MQ=255)
                                             cctcaGCGCATGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACGGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgcctccaacttattgatagtgtgttatgttc                                                                                                   <  1:368547‑M1/141‑38 (MQ=255)
                                             cTTCAGCGCCTGTGTATTAATGCAGCTTTCAATAGCACGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttc                                                                                                   <  1:98020‑M1/143‑38 (MQ=255)
                                             cTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttc                                                                                                   <  1:896514‑M1/143‑38 (MQ=255)
                                                 aGCGCCTGGTTATTAATGCAGCGTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactacaagttattgatagtgttttatgttcagat                                                                                               <  2:115494‑M1/143‑42 (MQ=255)
                                                   cgcCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataa                                                                                             >  2:921139‑M1/1‑100 (MQ=255)
                                                   cgcCTGAGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataa                                                                                             <  2:679530‑M1/143‑44 (MQ=255)
                                                      acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGGTAGCAATGGCGATGGTTTTACCCAGATGACGACCGGCATACTCaa                                                                                          >  1:596237‑M2/89‑143 (MQ=255)
                                                       tGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                         >  1:662716‑M1/1‑96 (MQ=255)
                                                         ggTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTGTTTGCGGATTAAATAAGTTGggtaatgaccccgacttattgggagtgttttatgttccgataatgcccg                                                                                       >  1:419689‑M1/1‑94 (MQ=255)
                                                          gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTAc                                                                                      >  1:730802‑M2/85‑143 (MQ=255)
                                                           tATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGAGAATTCACCGGCAATAAAAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaactcattgatagtgttttatgttcagcgaattcccgat                                                                                     >  1:658924‑M1/1‑92 (MQ=255)
                                                            ggaacagctgatagaaacagaagtcactggagcaactcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACtt                                                                                    <  2:741791‑M2/61‑1 (MQ=255)
                                                            aTTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTTGTTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtcatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                    <  2:22134‑M1/143‑53 (MQ=255)
                                                              tAATGCAGCTTTCAATAGCAGTGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAATAATTTTTTGCGGATTAAATAAGTTGggtaatggctcagacttattgatagtgttttatgttcagataatgcccgatgac                                                                                  <  1:456738‑M1/143‑55 (MQ=255)
                                                              gacagctcatagaaaccgaagccactggtgcacctcaaaaacaccctccttcacgtcatcggtacgttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTcc                                                                                  <  2:906639‑M2/63‑1 (MQ=255)
                                                               acagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGATTTAAACAGATGACGACCGACATACTAAATTACttcgg                                                                                 >  1:371384‑M2/80‑141 (MQ=255)
                                                               aaTGCAGCTTTCAATAGCAGGGAGCAGCACTGTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact                                                                                 <  1:29691‑M1/143‑56 (MQ=255)
                                                                   cAGCTTTTGGTAGCAGGGCGCAGCAATTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgacgccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                             <  2:746340‑M1/143‑60 (MQ=255)
                                                                    tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCACTGGCGATGGGTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGcc                                                                            >  1:211513‑M2/75‑143 (MQ=255)
                                                                     gatagaaacagaagccactggagcacctcaaaaacaccagcatacactaaatcagtaagttggcggcatcaccAATAAGTTGATCGCAATGGCGATGGTGTTACCCAGATGACGACCGACCTACTCAGTTACTTCCGACGACa                                                                           >  1:292181‑M2/74‑143 (MQ=255)
                                                                       tttCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                         <  2:489547‑M1/143‑64 (MQ=255)
                                                                       tttCAATAGCAGGGAGCAGAACTTGATCGGCTTCGGTGATTTCATCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                         <  2:364560‑M1/143‑64 (MQ=255)
                                                                         tCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttacgttcagataatgcccgatgactttgtcatgca                                                                       >  2:625838‑M1/1‑78 (MQ=255)
                                                                          aaacagaagccactggagcacctcaaaaacaccatcatacactcaatcagtaagttggcagcatcaccAATAAGATGATAGCAATGGCGATGGAATCACCCCGATGACGACCGACAGACTCAATTACTTAGGCAGCCAgacaa                                                                      >  2:829434‑M2/69‑141 (MQ=255)
                                                                          aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATACGTTGATAGAAATAGAGATGGATATACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTa                                                                      >  1:834531‑M2/69‑143 (MQ=255)
                                                                          aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATCCTCAATTACTTCGGCCGCCCGActc                                                                      >  1:191237‑M2/69‑142 (MQ=255)
                                                                            ccagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATc                                                                    <  2:310691‑M2/77‑1 (MQ=255)
                                                                             tAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                   >  1:797137‑M1/1‑74 (MQ=255)
                                                                             cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCg                                                                   >  1:811897‑M2/66‑143 (MQ=255)
                                                                                 aGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgattactttgtcatgcaggtccacc                                                               <  2:212649‑M1/143‑74 (MQ=255)
                                                                                  gggAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccggtgactttgtcctgcagctcctccg                                                              >  1:558035‑M1/1‑69 (MQ=255)
                                                                                  gccactggagcgcttcaaaaacaccatcatacactacatcagtaagttggcagcatcactAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCttt                                                              <  2:717998‑M2/83‑1 (MQ=255)
                                                                                  gccactcgagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCttt                                                              <  1:859328‑M2/83‑1 (MQ=255)
                                                                                    cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGt                                                            >  1:906691‑M2/59‑143 (MQ=255)
                                                                                       tggtgcacctcaaaaactccatcatacactaaagcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTcg                                                         <  1:204298‑M2/88‑1 (MQ=255)
                                                                                       tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCATCTGTTcg                                                         >  2:466333‑M2/56‑143 (MQ=255)
                                                                                       cagcaCTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                         <  2:19657‑M1/143‑80 (MQ=255)
                                                                                         gcaCTTTATCGGTTTAGGTGATTTCACCGGCAATAACAATTTTTTGCTGATTAAATAAGTTGtgtaatgactccaacttatttatagtgttttatgttcatataatgcccgatgactttgtcatgcagctccaccgattttga                                                       <  2:519659‑M1/143‑82 (MQ=255)
                                                                                          caCTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcgaacgatctgcgg                                                      >  2:799155‑M1/1‑61 (MQ=255)
                                                                                           aCTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga                                                     >  1:786400‑M1/1‑60 (MQ=255)
                                                                                            ctctatcTGATTCCGTCACTTCACCCCCAATCACAATTTTGTGCAGATTAAATAAGTTGagtaatgactccaacttatttatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcccccgattttgagaa                                                    <  2:481725‑M1/140‑85 (MQ=255)
                                                                                             tttggcggtttCGGTAATTTCACCGGCAACAACATTTCTTTGCGTATTAAATAAGTTGggtaatgattccaacttattgatagtgttttatgttcagataattcccgatgactttgtcatgtagctctaccgattttgagaac                                                   <  2:63382‑M1/138‑86 (MQ=255)
                                                                                             tttATCGGCTTTGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactctaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgcgcac                                                   >  2:453706‑M1/1‑58 (MQ=255)
                                                                                             tttATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcaggtgatgcgcgaggactttgtcatgcagctacagcgattttgggaac                                                   >  1:387923‑M1/1‑58 (MQ=255)
                                                                                             tttATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                   >  1:735453‑M1/1‑58 (MQ=255)
                                                                                               ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCACTTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTg                                                 >  2:376780‑M2/48‑143 (MQ=255)
                                                                                               ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTg                                                 <  1:894095‑M2/96‑1 (MQ=255)
                                                                                                   tgcTTCGGTGATTTCACCTGCAATAACAATTGTTTGCGGATTAAATAAGTTGggtaatgactccaactgattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                             <  1:2068‑M1/142‑92 (MQ=255)
                                                                                                    aaacaccctcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTCCGCGGCTTTGCAGAt                                            <  2:789371‑M2/101‑1 (MQ=255)
                                                                                                    aaacaccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGAt                                            >  1:605569‑M2/43‑143 (MQ=255)
                                                                                                       tCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttggcctgcagctccaccgatttgggggacgaccgcgacg                                         >  1:775023‑M1/1‑48 (MQ=255)
                                                                                                         ccatcatacactaaatcagtaagttggcagcatcaccAATAAGTTGATGGCGGTGGCGAACATTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGttt                                       <  1:679766‑M2/106‑1 (MQ=255)
                                                                                                            gATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                    >  2:731356‑M1/1‑43 (MQ=255)
                                                                                                                    taaatcactaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAg                            <  1:161436‑M2/117‑1 (MQ=255)
                                                                                                                       cAATAACAATTTTGTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgctcagataatgcccgatgactttgtcatgcagctccaccgactctgagatcgacagcgacttccgtcccagccgtgc                         <  2:238462‑M1/143‑112 (MQ=255)
                                                                                                                       atcagtaagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAgtcg                         >  1:841765‑M2/24‑143 (MQ=255)
                                                                                                                            taagttggcagcatcaccAATAAGTTGATAGCGATGGCGATGGTTTTACCCTGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAg                    >  2:488378‑M2/19‑143 (MQ=255)
                                                                                                                            taagttggcagcatcaccAATAAGTTGATAGCAATGGCGATGGATTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAg                    >  1:813650‑M2/19‑143 (MQ=255)
                                                                                                                            aCAATGTGTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                    >  2:713289‑M1/1‑27 (MQ=255)
                                                                                                                             cAATTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                   >  2:84925‑M1/1‑26 (MQ=255)
                                                                                                                               aTTTTTTGCGGATTAAATAAGTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagtacgacagcgacttccgtcccagccgtgccaggtgct                 <  1:604820‑M1/143‑120 (MQ=255)
                                                                                                                                tttgatgcggaTTAACTAAGTTGggtaacgactccaacttattgatagtgtattatgttcagataatgcccgatgactttgtcatgcagttccaccgtgtttgagaacgacagcgacctccgtcccagccgtgccaggtgctg                <  1:366268‑M1/138‑121 (MQ=255)
                                                                                                                                            ccAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCGGCTCTgg    <  1:412914‑M2/141‑1 (MQ=255)
                                                                                                                                              aaTAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCTGCTCTCGTa  >  1:325123/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GTGATCCAGCTCAGAACGTACCACCGGCAGATTAGTGCGAAACGCCTTCAGCGCCTGGGTATTAATGCAGCTTTCAATAGCAGGGAGCAGCACTTTATCGGCTTCGGTGATTTCACCGGCAATAACAATTTTTTGCGGATTAAATAAGTTGATAGCAATGGCGATGGTTTTACCCAGATGACGACCGACATACTCAATTACTTCCGACGCCAGACTATCGCCTTTGTTCGCGGCTTTGCAGATAGTTTTGATGGTGCAGTCGTCCAGCGGCACGCGGCTCTGGTA  >  NC_000913/700455‑700739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.