New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 381681 =NA (NA)7 (0.120) 4/266 8.8 NA coding (331/366 nt)
coding (8/906 nt)
insC1
insD1
IS2 repressor TnpA
IS2 transposase TnpB
?NC_000913 381753 = NA (NA)coding (80/906 nt) insD1 IS2 transposase TnpB
Rejected: Coverage evenness skew score above cutoff.

AGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/381831‑381681
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgtgcgcAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCT  >  NC_000913/381753‑381894
                                                                                                                                                                                                                                                                                                     
AGCACCTCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAAAAACGCACGCTACAGTTGGTGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGC                                                                                                                                                        <  2:469393/143‑1
AGCACATCCGTATCTTCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGC                                                                                                                                                        <  2:1020942/143‑1
 GCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCG                                                                                                                                                       >  2:533946/1‑143
 GCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCCGAGAATGACGTGCAACTGCGCACGCGACACCCGGACACAACGGCCGACTAAGCTTACTCCCCATCCCCGGCCACTCAGGGCG                                                                                                                                                       >  1:447350/1‑143
  cccactCGTGTCGTCACTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGC                                                                                                                                                      <  1:922909/137‑1
  CACATCCGTATCATCAGTGTGACGACTGCGGCGGCCCACCATCCAGAAATCGGTTCGTCTGAGAATGACGCGCAACCGCGCACGCCACACCCGGATACAACGGCTGACCAAGCGTACTCCCCACCCCCCGGCCACAAGGGCGC                                                                                                                                                      >  1:740597/1‑143
  CACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCAGCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGC                                                                                                                                                      <  1:505578/143‑1
  CACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCACCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGC                                                                                                                                                      <  2:128787/143‑1
   ACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACCCCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAGTAGGGGCGCG                                                                                                                                                     >  2:232293/1‑143
   ACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACCACGGCTGGCTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCG                                                                                                                                                     >  1:283116/1‑143
    CATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACGACGGCTGACTAAGCTTACTCCCCATCCCCGGGCACTCAGGGCGCGc                                                                                                                                                    >  1:813758/1‑142
    CATCCGGATCATCAGCGGGACGTCTGCGGCTGTCATCCGTCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGT                                                                                                                                                    <  1:257697/143‑1
     ATCCGTATCATTAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACCCCCCATCCCCCGGCAATAACGGCGCGgg                                                                                                                                                   >  1:263876/1‑141
     ATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTCAGCTTACTCCCCATCCCCGGGCACTAGGGGCGCGTG                                                                                                                                                   >  1:538538/1‑143
     ATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTG                                                                                                                                                   >  2:862051/1‑143
     ATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACCAAGCTTACTCCCCATCCCCGGGCCATAAGGGCGCGcg                                                                                                                                                   >  1:649353/1‑141
     ATCCGTACCACCAGTGTGACGACTGCGGCGGCCATCCATCCAGCCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTG                                                                                                                                                   <  1:214612/143‑1
      TCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACTACGGCTGACTAAGCTTACTTCCCATCCCCGAACAATAAGAGAGCGTac                                                                                                                                                  >  2:296527/1‑141
      TCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACACTGGCTGCACAAGCCTAGACCCCCTCCCCGGGCAATAAGGGCGCTTGC                                                                                                                                                  >  1:491133/1‑143
       ccgtagacTCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTGCG                                                                                                                                                 <  2:426055/135‑1
       CCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGAAAACGGCTGACTAAGCTTACGCCCCATCCCCGGGCACTAGGGGCGCGTGCG                                                                                                                                                 >  2:890911/1‑143
        ctTATCATCAGTGTGCCGACTGCGGCGGCCCTCCCTCCAGTCCTCGGTTCGTCTGAGAACGACGCGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTGCGC                                                                                                                                                <  2:1039402/141‑1
        CGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGTGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTGCGC                                                                                                                                                >  2:372585/1‑143
           ATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACCGCTCACTAAGCTTACTCCCTCTGGCCTGCCAATAAGGGCGCGTGCGCcat                                                                                                                                             >  2:996844/1‑140
            TCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTACAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCCAGCGCcatc                                                                                                                                            >  1:214863/1‑139
              ATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCAGTTCGTCGGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAACAAGGGCGCGcaccctattca                                                                                                                                          >  1:254181/1‑132
               TCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGGACTAAGGGGGCGTGAGCAatgcct                                                                                                                                         >  1:658164/1‑137
                CAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGCCACCCGGAGGCAACGGCTGACTAGGGTTACGCCCAATCGCCGGGCACTAAGGGCGCGTGCcgtcgccact                                                                                                                                        >  1:262120/1‑133
                                                                                CGCACGCGACACCGGGAGACGACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTGCGCAGGTGCACGTCATTCTCAGACGAACCGATGACTGGATGGACGGCCGCCGCAGTCGTCCCACTGATGAGACGG                                                                        >  1:83182/1‑143
                                                                                 GCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACCGGAGGGATGGCCGCCGCAGTCGTCACACTGCTGATACGGA                                                                       >  2:1041866/1‑143
                                                                                                                                      ctgtgtttcgtGTGCTCACTTTCACTTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCTTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATC                  <  2:538461/132‑1
                                                                                                                                          gttGCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCG              <  1:967484/140‑1
                                                                                                                                          gtGGCGCGTGTGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCG              <  2:174396/141‑1
                                                                                                                                          gacGCGCGTGCGCAGCTGTACGTCATTCTCAGACGAAGCGATGACTGGATGGATGGCCGCCGCAGTCGTCCCACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCG              <  1:603820/140‑1
                                                                                                                                           tgcCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTCCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGG             <  2:918805/140‑1
                                                                                                                                           tGGCGCGGGCGCAGTTGCACGTCATGCTGAGACGAACCGATGGCTGGAGGGGTGGCCGCCGCAGTCGTCACACTGATGATACGGGTGTGCTTCGCCGGATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGG             <  1:1052376/142‑1
                                                                                                                                              CGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTA          <  2:1092250/143‑1
                                                                                                                                               GCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTAT         >  2:220726/1‑143
                                                                                                                                               GCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTAT         >  2:571213/1‑143
                                                                                                                                               GCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGACGGCCGCCGCATTCGTCCCACTGATGATACGGATGTGCATCTCAGTATACACCATGTTATCGCAGACCTGCCAACTTATGCTTATCGTCGGATAT         >  2:357665/1‑143
                                                                                                                                                CGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCACCGTATGGTTATCGTCGGGTATG        >  2:256337/1‑143
                                                                                                                                                CGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATG        >  2:1122315/1‑143
                                                                                                                                                CGTGCGCAGTGGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATG        <  2:945206/143‑1
                                                                                                                                                 GTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGG       <  2:343057/143‑1
                                                                                                                                                 GTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGG       <  2:620792/143‑1
                                                                                                                                                 GTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGAGGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTGCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGG       <  1:393016/143‑1
                                                                                                                                                 GTGCCCAGTTGCACCTCATTCTCAGACCAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGG       <  2:385442/143‑1
                                                                                                                                                  cGCGCAGCTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGG      <  2:526232/142‑1
                                                                                                                                                  TGCGCAGTTGCACGTCATTCTCAGACGACCCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGAGACGGATGTGCTGCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGG      <  2:865874/143‑1
                                                                                                                                                  TGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGG      >  2:761006/1‑143
                                                                                                                                                   GCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATATTATCGGAAAGCTGCCAACGAATGGTTACCGGCGGcaaaggga     >  1:8660/1‑135
                                                                                                                                                    CGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTGTGGGCG    >  2:89980/1‑143
                                                                                                                                                     GCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGC   <  2:469698/143‑1
                                                                                                                                                     GCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCCGGTATGGGCGC   >  1:990352/1‑143
                                                                                                                                                     GCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCAGCAGTGGTCACACTGATGATTCAGAATTGCTTCTCCGTATACACCATGTTATCAGAGAGCTGCCAACGTATGGTTATCGTTGGGTCTCGGCGC   >  1:133461/1‑143
                                                                                                                                                      CAGTTGCCCGTCATTCTCAGACGAACCGCGGACTGCCTGGATCGCCGCCGCAGTCGTCACACTGATGACACGGATGTGCTTCTCCGTCTACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCT  <  2:491355/143‑1
                                                                                                                                                      CAGTTGCACGTCATTCTCAGACGCACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCAGGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCT  <  2:729180/143‑1
                                                                                                                                                                                                                                                                                                     
AGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCAGTCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGACAACGGCTGACTAAGCTTACTCCCCATCCCCGGGCAATAAGGGCGCGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/381831‑381681
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgtgcgcAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCT  >  NC_000913/381753‑381894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.