| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3652035 = | NA (NA) | 80 (1.250) | 55/284 | 0.1 | 95.2% | intergenic (+5/+146) | yhiS/insH1 | pseudogene/IS5 transposase and trans‑activator |
| ? | NC_000913 | = 4049924 | 4 (0.060) | noncoding (27/109 nt) | spf | Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent | |||||
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3652176‑3652035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTT < NC_000913/4049924‑4049783 TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGCAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGACTCAGCCGCGACGAATTTCCCCGCCTATTCGCACCTTCCA > 1:226553/1‑143TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCACACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCA < 2:981287/143‑1TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGCAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTCATTCGCACCTTCCA > 1:597759/1‑143TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGAGAGAAAAAATCGGCGCAAACATGAAGAAATGAAATGACTGAGTCAACCGAGAAGAAATTGACGGCGTATTAGCACCTTCCA > 2:1096833/1‑143TGGGGATAACGCCTTAAATGGCGAAGAAACGGCCGAAATAGGCTCATACATGGCATTTCCGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCCTATCCGCACCTTCCA > 2:161320/1‑143 ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAA < 2:792843/143‑1 ATAACGCCTTAAATGCCGAAGATACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGTCTCAGACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAA < 2:679963/143‑1 TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAAC < 2:612950/143‑1 GCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAAGGACTGAGTCAGCCGAGAAGAATTTCCACGATGAATCGCACCATCCATAGcagtacg > 1:30929/1‑136 CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGGGCAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTAC > 1:79951/1‑143 CGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAGTGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCACAGAACATATTACCTCTGTAC > 1:119482/1‑143 GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACC > 2:922748/1‑143 GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACC > 2:735038/1‑143 ACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTATCTTACtc > 2:861159/1‑141 GGTCTGACTAGGCTCATTCAAGGGATTTACGGGAGAAAAAATCGGCTCACACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGA < 1:591714/143‑1 GTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGcc > 2:947138/1‑141 GTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCGTATTAGCACCTTCCATAGACCCGCCTACCCCTGTACCCCACGCGcc > 1:1027421/1‑141 TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGCCT > 2:636306/1‑143 TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACT > 2:710291/1‑143 AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGccccac > 2:499705/1‑137 AATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACT < 1:731946/143‑1 GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACT > 2:1033172/1‑143 tgctgCAAGGCATTTACGTGAGAAAAAATCGGCGCAAACACGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCT < 1:293402/138‑1 TGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCc > 2:528421/1‑142 cgctcttccgatctCGGGAGAAAAAATCGGCTCAAACATGAAGAAAAGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAAAAACCAAAACTCGGTACCCTACGCGACTAACTTTACTCTTT > 1:489137/15‑143 taCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGCATCACCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTT < 2:1003702/141‑1 AAGGCATTTACGGGAGCAAAAAGCTGCTGAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGGACATCTTACCTCTGTACACTCCGCGACTAACTTTACTCTTTTTTG > 1:681718/1‑143 AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTG > 2:1100683/1‑143 AGGCATTTACGGGAGAAGAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCACCGCTAATTCGCACCTTCCATAGAACATCTTACCTCTGCACCCTACGCGACTAACCTTACTCCTTTTGGT > 1:414591/1‑143 AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATGTCCCCGCCTATCCGAACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGT > 1:389719/1‑143 AGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGGCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGGACATCTTACCGCTGTACCCTACCGGACTAACCTTGCCATCTTTTGT > 2:783611/1‑143 CATTTACGGGAGAAAAAATCGGCTCAAACAGGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCA < 2:711364/143‑1 TTACAGAAGAAAAAATCGGCTCAAACATGAAGAAATTATATGACTGAGTCGGCCGAGAAGAATTTCCCCGCTTATTCGCACCTGCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACCCTTTTTTGTTCAGTT < 2:342589/143‑1 ACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCA < 2:162173/143‑1 CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAG > 2:235405/1‑143 CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCCCTCTCCCCCCCGCCACCATCTTTACTCCTTTTTGTTCCGTTCAG > 1:1112170/1‑143 GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGA < 2:620592/143‑1 GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACGAACTTTACTCTTTTTTGTTacattcatg > 2:92577/1‑134 GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGACGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATCGAACATCTTCCCTCTCTACCCTACGCGACTTACTTTACTCTTTTTCGTTCAGTTCtgt > 2:284586/1‑140 GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAA > 1:107206/1‑143 GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAA < 1:735038/143‑1 GAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCCGTTTAGActgc > 1:958465/1‑139 AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTACCTTTACTCTTTTTTGTTCAGTTCAGAAAGCA > 1:731872/1‑143 AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCA < 2:397926/143‑1 AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCGGAGGAGAATTTTCGTGCTTATTCGGACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACT > 2:498885/1‑143 AAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACT > 2:173026/1‑143 TCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAATTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTT < 2:721235/143‑1 CGGCTCAACCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTG < 1:961127/143‑1 CTCAAACAGTAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTCTTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTGGTTCAGTTCAGAAAGCACTTTTTGTAA < 1:66945/143‑1 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGACAGCACTTTTTGTAATTT > 1:281462/1‑143 AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTCTTTTGTTCCGCTCATACTGCACTCTCTGTAATTT > 1:377562/1‑143 TGAAGAAAGGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTTTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTT < 2:630180/143‑1 AAGAAATGGAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCA < 1:8859/143‑1 AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCA < 2:480975/143‑1 AATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCA > 2:892831/1‑143 TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATA < 2:219637/143‑1 CTGAGTCAGCCGGGTATAATTTCCGCGCTGATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGA < 1:963584/143‑1 gagcccgcccaacAGAATTCCCCCGCCTACCCGCACCTTCCATACAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAAT < 1:710500/130‑1 AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATT > 2:1017269/1‑143 ttgGCCGAGTAGAATTTCCCCGTTTATGCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGCTTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTC < 1:1075957/140‑1 ccGCCGACAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTACCTTTACTCTTTTTTGTTCCGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCT < 2:185012/141‑1 CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTTCTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCT < 1:617327/143‑1 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTCCCTCTGTACCCTACGCGCCTAACTTTACTCCTTTTCGTTCACTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATGGGCATTTCTA > 1:187237/1‑143 GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGGACATCTTGCCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAA < 1:24444/143‑1 GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAACTTCTAA > 2:25860/1‑143 CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTATTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAAT < 1:725375/143‑1 CGAGAAGAATGTGCCCGCTTATTCGGACTTTCCATACAACATCTTACCCTTGTACCTTACGTGCCTAGCTTTCCTTTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATA < 1:284586/143‑1 AGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGC < 2:232218/143‑1 AGAAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGC < 1:36797/143‑1 AAGAATTTCCCCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCA > 2:333284/1‑143 CCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCCGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACt > 1:478499/1‑142 CCGCTTATTCGCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACG > 1:754233/1‑143 cgttgATTCGCACCTTCCATAGATCATCTTACCTCTGTACGCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGT < 1:124315/138‑1 TTCGCACCTTCCATAGCATCTCTTACCCCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGC < 2:119482/143‑1 GCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAACGCAGTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGGATTTCTACTAGCCATCCCTACACGTGACAGCTTA > 2:49156/1‑143 GCACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTA > 1:213022/1‑143 CACCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTAT < 1:903596/143‑1 CCTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAAATTTAGTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGT < 2:207858/143‑1 CTTCCATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGCAGGCACGTTTTGCTTGTTGCTAACAGTTGTTGCATAGGAATTTCTACTAGCCATCACAAAACGTGACAGCTTATGTT < 1:235405/143‑1 CATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTTCTT > 1:163327/1‑143 TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3652176‑3652035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAGAACATCTTACCTCTGTACCCTACGCGACTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTT < NC_000913/4049924‑4049783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |