| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1979489 | 6 (0.090) | 92 (1.430) | 56/284 | 0.1 | 93.9% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290111 | NA (NA) | intergenic (‑32/+1) | insH1/yejO | IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system | |||||
Only 100 of 171 total aligned reads displayed.
AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATT > NC_000913/1979347‑1979631 | aaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTaa < 2:914467/143‑1 (MQ=255) tGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaa < 2:978258‑M1/143‑5 (MQ=255) tGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaa < 2:492451‑M1/143‑5 (MQ=255) ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa < 2:200207‑M1/14‑1 (MQ=255) ttaaatggagaagaaagggtctacatcggcagattcaaggcaatgaccgacgaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa > 1:791777‑M1/130‑143 (MQ=255) ttaaatcgcgaacaatcgtgctaaataggctgattcaagccatgtacgtgagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa > 1:802459‑M1/130‑143 (MQ=255) taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgctaatacgcagcttccCTAATTAAATACaaa < 1:880555‑M1/15‑1 (MQ=255) gAATAATCGCAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaa < 1:1049824‑M1/143‑13 (MQ=255) aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaaga < 2:728456‑M1/17‑1 (MQ=255) atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaa > 1:520553‑M1/126‑143 (MQ=255) tgagcgaaaGGGGAGGTTGCGCACAGTCAAAGTAACTCACCGTAAATAATCATCTGCTATAAATAAGCACTGTCATGCAATACCAGATAAGCTATTGTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 2:834116‑M1/139‑16 (MQ=255) caatcGAAATGGGATGTTGCGCACAGGCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCGATTTTCAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 2:61234‑M1/142‑16 (MQ=255) aatCTAAATGGGATGTTGCGCACAGGCAAAATAACTCACCGTACATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaag < 1:335234‑M1/143‑17 (MQ=255) atCCAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATCATCATCTGCTATAAATAATCACTTTCATGCAATACCAGAGAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagt < 1:840653‑M1/143‑18 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTCATTAAATACAAAAAAAGGca < 2:662299‑M1/23‑1 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca < 1:1005860‑M1/23‑1 (MQ=255) gaagaaacggtctaaataggcaaattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGca > 2:583877‑M1/121‑143 (MQ=255) gAAAGGGGATGTTGCGCACAGTCAAAATAGCTCACCGTAAATAATCATCTGCTATACATAATCACTTTCATGAAATACCAGATAAGCTATTTTTAAACAGACGCTGACCGCACAACAAACTAAggaaggtgcgaacaagtccc < 2:797165‑M1/143‑21 (MQ=255) ggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGACAGGCAACACTCaa < 2:18509‑M1/31‑1 (MQ=255) ggtctaaataggctgatacaaggcattgacgggagaatgggtccgcacaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa > 2:810312‑M1/113‑143 (MQ=255) aTGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAAGAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga < 2:714765‑M1/143‑29 (MQ=255) cgcACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAagaaggtgcgaaaaagaccctcatatgagcaaat > 1:593296‑M1/1‑109 (MQ=255) taggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgt < 2:672130‑M1/39‑1 (MQ=255) gctgattcaaggcatttacgggagaaaagatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa > 2:962895‑M1/102‑143 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:454470‑M1/143‑39 (MQ=255) caGTCAAAATAACTCACCGTAAAGAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 1:677974‑M1/143‑39 (MQ=255) tCAAAATAACTCACCGTAAATAATTTTTTATCTGAAATTATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACGGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc > 1:344384‑M1/1‑102 (MQ=255) aaaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACCAACTAAggaaggtgcgaacaagttcctgatatgagatcatgtttgtcat > 2:746889‑M1/1‑100 (MQ=255) aaaTAACTCACCGTAAATAATCACCTGCTACAAATAATCACTTTCATGCAATACCAGATAAGCTATTTCTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc < 2:24853‑M1/143‑45 (MQ=255) aaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct < 1:591507‑M1/143‑46 (MQ=255) aaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct < 1:654503‑M1/143‑46 (MQ=255) gcatttacgggagaaaagatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtttt > 1:945244‑M1/91‑143 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtttt > 2:881754‑M1/91‑143 (MQ=255) cTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc > 2:851157‑M1/1‑93 (MQ=255) ttgacgggagaaaaaagcggctcaaacacgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACa > 1:591356‑M1/88‑143 (MQ=255) aCCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACCAAggaaggtgcgaacaagtccctgacatgagaccacgtttgtcatccggagccct > 1:1100969‑M1/1‑90 (MQ=255) acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatat > 1:200207‑M1/85‑143 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACatatat < 1:429521‑M1/61‑1 (MQ=255) agaaaaaatcgcgccagagagtaagaaatgaaatgacttagtcagccgagaagaatttccccgcttattcgcacctttcCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTaa > 1:973680‑M1/80‑143 (MQ=255) taatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAgtaaggtgcgaacaagtccctgagatgacgtcatgtttgtcatctggagccatagaacagg > 1:926755‑M1/1‑82 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAcc < 2:1029186‑M1/66‑1 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAACCAACTAAATGTTAATGAAACGTTTTACATATATAAACCAc < 1:300090‑M1/68‑1 (MQ=255) aatcggctcaaccatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACtt > 1:35958‑M1/74‑143 (MQ=255) tcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat > 2:982863‑M1/1‑76 (MQ=255) tGCTATAAATAATCCCTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcacctggttccatagaacagggttcatca < 1:982174‑M1/143‑70 (MQ=255) tataAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 1:711049‑M1/143‑73 (MQ=255) cgaacatgaagaaatgaaatgactgagtcagccgagaagaaatgccccccttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATg > 1:123535‑M1/66‑143 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGc < 2:657277‑M1/79‑1 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGc < 1:684587‑M1/79‑1 (MQ=255) gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacattccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGaa < 2:495254‑M1/85‑1 (MQ=255) aagaaatgaaatgactgagtcagccgaaaagaatgtccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAt > 1:100586‑M1/58‑143 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCa > 2:238240‑M1/56‑143 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaccaagtccctgatatgagatcacgtctctcatctggagccatagaacagggttcatcatgagtcatcaacttac > 2:873480‑M1/1‑58 (MQ=255) aCCAGATAAGGTATCTTGAAGCACACACTGACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcaggtttgtcatctggagccatagaacagggttcatcatgcgtcctcaacttaccttcgccgaca < 1:982714‑M1/143‑97 (MQ=255) gactcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTAGTTTCt > 1:855383‑M1/42‑143 (MQ=255) cAGATAAGCTATTTTGAAACAGACACTTACCGCACAACAAACTAAggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 1:773761‑M1/143‑99 (MQ=255) gtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTta > 1:1068876‑M1/40‑143 (MQ=255) gctcttccgatcttttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGTGATTCGGTGCACTATTTTCTtata < 2:267171‑M1/106‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAAtt < 2:1056638‑M1/109‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACAACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAAtt < 2:117433‑M1/109‑1 (MQ=255) cTATTTTTAAACAGACACTGACCGCACAACCAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgcagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 1:699218‑M1/143‑107 (MQ=255) tATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcactgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc > 2:393000‑M1/1‑36 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTAc < 2:144143‑M1/111‑1 (MQ=255) agaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTCATGCGGCCAATCAGTACACTATTTTCTTATAATTacc < 2:1073736‑M1/112‑2 (MQ=255) gaatttccccgcttattcgcaccttccCTAATTAAATACAAAGACAGTCAACAATCAACTTAATGTTAATGCAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATGATTACCTTTg < 1:426608‑M1/116‑1 (MQ=255) tttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa > 2:383235‑M1/25‑143 (MQ=255) tttccccgcttatccgcaccttctCTTATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGaaa > 1:435035‑M1/25‑143 (MQ=255) cccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtat > 2:351109‑M1/21‑143 (MQ=255) ccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTGTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtata < 2:634465‑M1/124‑1 (MQ=255) acacTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 1:514393‑M1/1‑23 (MQ=255) cggttattcgcaccttccATAATTAAATACAAAGAATGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTCTAATGCTGATAATCAGTACACTATTTTCTTATAATTACATTTGAAATTatat > 1:77556‑M1/19‑143 (MQ=255) cgcttattcgcaccttccTTTATTAAATACAAAGAAATGCAACTATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGCTTAATGCGGAGCATCAGTACACTATTTTCTTATAATTACATTTGAAATTatat > 2:1005860‑M1/19‑143 (MQ=255) acTTACCGCACAACAAACTAAggcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattccgcagtcagcgccgtcag > 1:391288‑M1/1‑21 (MQ=255) ttACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac > 1:929439‑M1/1‑19 (MQ=255) tcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCAcc < 2:1001664‑M1/132‑1 (MQ=255) gCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatgaacttaccttcgccgacagtgaattcagcagtaaccgacgtcaaccccgaa > 2:1098571‑M1/1‑14 (MQ=255) gCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtgcgtcgtgagtcatcaaattaccttcgccgacagtgaattcagcagtaagcgcggtcagaccagga > 2:41947‑M1/1‑14 (MQ=255) cacaACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgccatctggagccatagaacagggttcctcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa < 2:399108‑M1/143‑131 (MQ=255) acaacaAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 1:444027‑M1/143‑132 (MQ=255) aacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga > 2:374880‑M1/1‑10 (MQ=255) caaACTAAggaaggtgcgaacaagtcactgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacggtgaattcagcagtaagcgccgtcagaccagcaaagaga > 1:1067736‑M1/1‑8 (MQ=255) aaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatccacttaccttcgccgacagtgaattcagcagtgagcgccgtcagaccggaaaagaggtt > 2:438501‑M1/1‑6 (MQ=255) cCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGAtt < 2:549670‑M1/142‑1 (MQ=255) cTAAggaaggtgctaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 1:287991‑M1/143‑140 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatggaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaagagagatttt > 2:1917‑M1/1‑4 (MQ=255) cTAATTAAATACAAAGAAAGGCAACAATCAACTTATTATTAAGGAAATGAATTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGTTAGttattt > 1:498806/1‑142 (MQ=255) tAAtgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 2:396279‑M1/143‑141 (MQ=255) tAAggaaggtgcgaacaggtgcctgatgtgagatcgtgtttgtcatctggagccatagagcagggttcatcatgagtcagcaagttaccttcggcgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 1:352316‑M1/143‑141 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 1:472520‑M1/143‑141 (MQ=255) tAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGtgattga < 1:309419/143‑1 (MQ=255) gaaggaaggtgcgaagaagtccctgatatgagatcgtgtttgtcatctggacccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 2:872365‑M1/142‑141 (MQ=255) gaaTTAAGTACAAAGAAAGGCAACAATCAACGTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGtgattga < 2:760483/142‑1 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattccgcagtaagcgccgtcagaccagaaaagaggttttct > 2:431718‑M1/1‑2 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 2:806374‑M1/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 2:650712‑M1/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:158079‑M1/143‑143 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 2:741629‑M1/143‑143 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:533435‑M1/143‑143 (MQ=255) aggaaggtgcgaacaagtcccggatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:646305‑M1/143‑143 (MQ=255) aTTAAATACAAAGAAAGGCAACAATCGACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTgattgatt < 1:666085/143‑1 (MQ=255) | AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATT > NC_000913/1979347‑1979631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |