| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4418517 = | 58 (0.900) | 3 (0.050) | 3/276 | 9.8 | 5.5% | intergenic (‑63/+45) | ulaR/ulaG | transcriptional repressor for the L‑ascorbate utilization divergent operon/L‑ascorbate 6‑phosphate lactonase |
| ? | NC_000913 | 4418549 = | 47 (0.750) | intergenic (‑95/+13) | ulaR/ulaG | transcriptional repressor for the L‑ascorbate utilization divergent operon/L‑ascorbate 6‑phosphate lactonase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCAACGACTTTCTCAACGGTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATAGTGGTACTCGAAGTTGTCTTTATCCA > NC_000913/4418375‑4418653 | tCAACGACTTTCTCAACGGTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATGCCGATAAAATTTGATTTTTTTAGATCATATTTGGAATAGCCAGCAACTATTACGc > 1:1051426/1‑143 (MQ=255) aaCGACTTTCTCAACGGTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCg > 2:770741/1‑143 (MQ=255) cTTTCTCAACGGTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAg > 2:775002/1‑143 (MQ=255) tttCTCAACGGTCACAAAGCACAATTTTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTATATTATATTTGTTATAGCCTGGATATACTACTTCGGATCgc > 1:681386/1‑143 (MQ=255) tctcAACGGTCACAAAGCCCAATTGTGCGAGCATTTGCAGGAGGATTTGATGTCTTTGTTCTTCAGTCATGAGCTATTCCTATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAgcgc < 1:414388/143‑1 (MQ=255) cAACGGTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGaa < 2:245878/143‑1 (MQ=255) aaCGGTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAAc > 2:989627/1‑143 (MQ=255) aaCGGTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAAc > 2:66709/1‑143 (MQ=255) gTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTtct < 2:1062344/143‑1 (MQ=255) tcgcagaGCCCATGTGGGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGAGAAAATTTGATTGTTTTAGATGATATGTGAAATATCCAGGAAATACTACGCCGGATAGCGCGAACTtctc < 1:37460/137‑1 (MQ=255) acaAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCa < 2:1076509/143‑1 (MQ=255) aaaGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTCTTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGCACTTCTCCACg > 2:491999/1‑143 (MQ=255) aaaGCCCAATTGTGCGAGCAGTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACg < 1:51392/143‑1 (MQ=255) aGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCt > 2:795592/1‑143 (MQ=255) ccAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATACAATTTGATTTTTTTAGATGATCTTTGAAATACCCACGAAATACTACCCTCGATAGCGCGAACTTCTCCACGCTccc > 1:913179/1‑143 (MQ=255) cagttGTGGGAGCATTTCCAGGAGGATTTGAGGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTAccc < 1:36886/140‑1 (MQ=255) ttGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGt < 2:936631/143‑1 (MQ=255) cgtgCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATTAGCTATTCCGATAAAATTTGATTTTTTTAGATTATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATaaa < 1:67736/140‑1 (MQ=255) gCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCACTCAAGAGCTATTCCGATCAACTTTGATTTTCTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCAGATAGCGCGAACTACTCCACGCTACCCGGTATAAACGa > 2:212982/1‑143 (MQ=255) gtttGCAGGAGGAGTTGATGTCTTTGTGCTTCAGTCATGAGATAGAACGATAAAATTTGATTTTTTTAGATGATATATGAAATAGCAAGGAAATACTACGCAGGATAGCGCGAACTTCTCCACGCTACCCGGTATACACGACa < 1:523174/142‑1 (MQ=255) aTTTACCGGAGGATTTGATGGCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTCGATTTTTTTAGATGATATTTGAAATAGCCAGCAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACa < 1:836848/143‑1 (MQ=255) cAGGAGGATTTGATGTC‑TTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGCACTTCTCCACGCTAACCAGTATAAAAAACAGATTAc > 2:589843/1‑143 (MQ=255) aggaggATTTGATGTCTTTGTGCTCAAGCAAACTGAGATGCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATCAACGACAgctccc > 1:800371/1‑138 (MQ=255) ggaggaTTTGATGTCTTTGTTCTTCAGTCATGAGCTATGCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATATCCAGGAAATACTACGCCGGATAGCGCGAACTTCGCCACGCTACCCGGTATAAACGACAGATTACa < 1:184434/143‑1 (MQ=255) ggaggaTTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGAATAGCGCGAACTTCTCCACGCTACCCGGTATAAAAGAGAGATTACa > 1:106447/1‑143 (MQ=255) gaggaTTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGCACTTCTCCACGCTACCCGGTATAAACGACAGATTACAg > 2:302554/1‑143 (MQ=255) tttGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGTTGATATTTGAAATAGCCAGGAAATACTACTCCTGATAGCGCTAACTTCTCCCCTCTACCCGGTATATATGACAGATTACCGGAATg > 1:336452/1‑143 (MQ=255) tttGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAAGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCGACCCGGCATACACGACAGCTTACACGCATg > 1:468065/1‑143 (MQ=255) ttGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGa < 2:544297/143‑1 (MQ=255) tGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGAc < 2:639478/143‑1 (MQ=255) aTGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACtt > 2:209530/1‑143 (MQ=255) cTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAAc < 1:989627/143‑1 (MQ=255) tttGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGCAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTCCAGCACTGACTTGAACg > 1:854073/1‑143 (MQ=255) ttCAGTCATGAGGTATTCCGATAACATTTGCTTGTGTGAGATGATATTTGAAATAGCCAGTAAATACTACGCCGGATAGCGAGAACTGCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATc < 1:386888/143‑1 (MQ=255) cAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATAACTTGAACGGCAGATCCg > 1:290419/1‑143 (MQ=255) gTCATGAGCTATTCCGAGAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGt < 1:1109171/143‑1 (MQ=255) tGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGCTCac > 2:223870/1‑142 (MQ=255) tGAGCTACTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTCCCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCaa > 2:872711/1‑143 (MQ=255) gcatATTCCGATAAAATTTGACTTTTTTGGATGATAGTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCTCGTTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATa < 1:768371/140‑1 (MQ=255) aGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCaaga > 2:367354/1‑141 (MQ=255) ttCCGATAAAATGTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCCCGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGaa < 2:915014/143‑1 (MQ=255) aaaTTTGATTTTTTTAGATGATATTTGAACTAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGCCTTGAACGGCAGATCCGGTTCAATAGTGAAGCAatcat < 1:978946/143‑1 (MQ=255) aaTTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAatcatc < 1:209530/143‑1 (MQ=255) gATTTTCTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAAc < 1:198410/143‑1 (MQ=255) tttttAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTGCACGCAACACGGTATACACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACcgcg > 2:763455/1‑143 (MQ=255) tgtAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACcgcgcg < 1:253109/141‑1 (MQ=255) aGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGAt < 1:334157/143‑1 (MQ=255) gatgatATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATa > 1:231853/1‑143 (MQ=255) atgatATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATAg < 2:306693/143‑1 (MQ=255) atgacagcggAAACAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATAg < 2:311981/134‑1 (MQ=255) atatTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATCGTGAAGCAATCATCGAAACCGCGCGGACAGTgg > 1:319608/1‑143 (MQ=255) tttGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATAATCGAAACCGCGCGGATCGTGGTAc > 2:80606/1‑143 (MQ=255) tGAAATAGACAGTAAATACTACGCCGGATAGCGCTAACTCCTCCACGCTACCCTGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATAGTGGTACTc < 1:690331/143‑1 (MQ=255) caTAGCCAGGAAATACTACGCCGCATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATAGTGGTACTCGaa < 1:307222/142‑1 (MQ=255) cAGGAACTGCGACGCCGTCTGGCGCGAACTTCTCCGCCCTACCCGTTATAGACGACAGATCACAGGAATGACTTGTGCGGGAGTTCCGGTTCAATAGTGAAGCGATCATCGAAACCGCGCGGATAGTGGTACTCGAAGTTGTc < 1:559895/143‑1 (MQ=255) aGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATAGTGGTACTCGAAGTTGTCt < 2:1002731/143‑1 (MQ=255) aGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGACAGTGGGACTCCaacgggcct > 1:806313/1‑136 (MQ=255) actacGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATAGTGGTACTCGAAGTTGTCTTTATCCa < 2:551650/143‑1 (MQ=255) | TCAACGACTTTCTCAACGGTCACAAAGCCCAATTGTGCGAGCATTTCCAGGAGGATTTGATGTCTTTGTGCTTCAGTCATGAGCTATTCCGATAAAATTTGATTTTTTTAGATGATATTTGAAATAGCCAGGAAATACTACGCCGGATAGCGCGAACTTCTCCACGCTACCCGGTATAAACGACAGATTACAGGAATGACTTGAACGGCAGATCCGGTTCAATAGTGAAGCAATCATCGAAACCGCGCGGATAGTGGTACTCGAAGTTGTCTTTATCCA > NC_000913/4418375‑4418653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |