New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 202024 = | 64 (1.000) | 3 (0.050) | 3/268 | 9.6 | 4.8% | intergenic (+28/‑77) | lpxD/fabZ | UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase/(3R)‑hydroxymyristol acyl carrier protein dehydratase |
? | NC_000913 | 202060 = | 58 (0.960) | intergenic (+64/‑41) | lpxD/fabZ | UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase/(3R)‑hydroxymyristol acyl carrier protein dehydratase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GCTGCACTGGTGATGAACATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGATCGCGTGCTGGATTTTGA > NC_000913/201919‑202198 | gCTGCACTGGTGATGAACATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCgtgt < 1:363109/143‑1 (MQ=255) gCACGGGGGAGGAAGATTGATGGCATGAGCAAGCGTCTGAAAGCGCTTGAGCGCAAGGTTAAGCAACAAGACTAACGTTCCTTCTGTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGttat < 1:795372/143‑1 (MQ=255) tGGTGATGAACATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTattatt > 1:1037168/1‑143 (MQ=255) gTGATGACCATTGCTGACATGAGTTTTCGTCTGCCATCGCTTGAACGCACGTTTAATCAACAAGACTAACTTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGt < 2:148919/143‑1 (MQ=255) tgatgaACATTGATGACATGAGCAAGCGTCTCACCACGCGTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTc < 2:1055601/143‑1 (MQ=255) gaACATTGATGACTGGGGCAACCGTCCGAAATCGCTTGAGCGCAGGGTTAATCAACAAGACTAACGTTCCATTTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGttt < 1:681054/143‑1 (MQ=255) gaACATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGttt > 2:67734/1‑143 (MQ=255) gaACATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGttt > 1:22717/1‑143 (MQ=255) aaCATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTc > 1:861372/1‑143 (MQ=255) aaCATTGATGACAGGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTc < 2:250866/143‑1 (MQ=255) aCATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGGTTTTATTGTCGTTTCt > 2:558942/1‑143 (MQ=255) cagtgatgaCATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCtt < 2:444582/140‑1 (MQ=255) cATTGCTGACATTAGCAAGCTGCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCtt < 1:40635/143‑1 (MQ=255) cATTGATGACATGCGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGAGTAACGTTCAATCTTTTGTTCGCAAAACTTTCCGGGCTGTCTCACTCTTACGCTTGCGGCAGGCCGCGTTGTACTTGTCggtgcgt > 1:595586/1‑137 (MQ=255) atgaCATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCCAACTGTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATAtt < 1:1035197/143‑1 (MQ=255) tgaCATCAGCAAGCGCCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATAttt < 2:1104114/143‑1 (MQ=255) aCATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTCTTATTGTCGTTTCTTATATTTTg > 2:241332/1‑143 (MQ=255) cATGAGCAAGCGTCTGGAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGa < 2:286733/143‑1 (MQ=255) cATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGa < 1:590624/143‑1 (MQ=255) gCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGa < 1:622816/143‑1 (MQ=255) cgaGCGGCTGAAATCGCTTGAGCGCAAGTTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTTTCATTCTTACTATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGaa < 1:500445/141‑1 (MQ=255) cAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGaa < 2:569628/143‑1 (MQ=255) cAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGaa < 2:261075/143‑1 (MQ=255) tgcggtggatgttgCTTGAGCGCAAGGTTAATCAACAATACTATCGTTCTATCTTTTGTTCGTCAACCTTTAGGGCCTGTCGCATTCTTCCTATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGTAaga < 1:45709/130‑1 (MQ=255) agagTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTGTGTTCACCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAaga < 2:666151/140‑1 (MQ=255) aGCGTCTGAAATCGCTTGAGCGCAAGGTTAGTCAACAAGAATAACGTGCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAaga < 2:696738/143‑1 (MQ=255) aGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCACCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAaga < 2:1048923/143‑1 (MQ=255) aattccgttGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTg < 2:111066/136‑1 (MQ=255) aTCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCGAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGac < 1:861668/143‑1 (MQ=255) tggtgtGAGCTCAAGGTTAATCAATGAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGTCCTGTCTCATTCTTACGATTGTGGCAGGCGGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGact < 1:795990/138‑1 (MQ=255) gCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGactac < 1:601577/143‑1 (MQ=255) ttGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATGTGGActgcta > 2:217559/1‑143 (MQ=255) gcgcGAGCTTCATCAACATGACTAACGTTCCATCTTTTGTCCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAacac < 2:959099/143‑1 (MQ=255) gcgcAAGGTTAATCAACAAGGCTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAacac < 2:161039/143‑1 (MQ=255) gcAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTTACTACTAACAATc > 2:1010954/1‑143 (MQ=255) cAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGCCTGCTAACACTCa > 1:578578/1‑143 (MQ=255) aaGGTTAATAAACAAGACTAACGTTCCAGCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGACGAGTAGCTTGACTACTAACACTcct > 2:1062479/1‑141 (MQ=255) tCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCa < 2:412156/143‑1 (MQ=255) aacaaGACTAACGTTCCATCTTTTGTTCGCCCAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCACACTCTGCAGa > 1:134941/1‑143 (MQ=255) caaGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGACTGTCTCCTTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGGCTACTAACACTCATACTCTGCAGAtt > 2:793656/1‑143 (MQ=255) gACTAGCGTTCCATCCTTTGTTCGTCAAACTTTCCGGCCTGTCTCATTCTCACGATTGCGGCAGGCCGTGTTATTATTTTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGaa < 2:400846/143‑1 (MQ=255) gACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGaa < 1:887999/143‑1 (MQ=255) gACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGaa < 1:1738/143‑1 (MQ=255) ctgaCGTTCTATCTTATGTTCGCATAACTTTATGGCCTGGCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGTCAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAaga < 1:734283/140‑1 (MQ=255) aaCGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGGATCTTGACTACTAACACTCATACTCTGCAGATTGAAgaga > 1:925807/1‑143 (MQ=255) ttCCATCTGTTGTTCGCCGCACTTTACGGTCTGTCTCATTCTTACGATTGCGGCACGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGAtttt < 1:30865/143‑1 (MQ=255) tCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTCACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTAGATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTTAAGAGATTTTa > 2:37625/1‑143 (MQ=255) ccATCTTTTGTTCGCCGAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAg < 1:899671/143‑1 (MQ=255) ccAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCAc > 2:72079/1‑143 (MQ=255) aCGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTCTTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCg < 1:789217/143‑1 (MQ=255) ggCCTGTCTCTTTCTTACGAGTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATCTTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGtt < 1:365507/143‑1 (MQ=255) ccTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTCTTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGCTTTTAGAACTTCTGCCGCGCCGTTCCCCGctct > 1:364078/1‑143 (MQ=255) aTTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACtggtg < 1:445374/143‑1 (MQ=255) cTTACGAGTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATAGTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGAt < 1:772649/143‑1 (MQ=255) gATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCCCCATTTCCCGTTCTTACTGCTGGATCGCGt > 1:566881/1‑143 (MQ=255) gATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGATCGCGt < 2:590284/143‑1 (MQ=255) gATTGCGGCAGGCCGTGTTATTATTGTCATTTCTTATATTTTGACAGGAAGAGTATCTGGACTACTACCACTCATACTCTCCAGATTGAAGAGATTTTAGAAATTCTGCCGAACAGTTTCCCGTTCTTTATGGTGGATcgcga > 1:393778/1‑142 (MQ=255) gCAGGCCGTGTTATTATTGTCGTCTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGATCGCGTGCTGGAt < 1:1046929/143‑1 (MQ=255) aGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGCTTGAAGAGATTTTAGAACTTCTGCCGCCCCGTTTCCCCTTCTTACTGGTGGATCGCGTGATGGGttt > 1:505811/1‑143 (MQ=255) aGGCCGTGTTATTATTGACGTTTCATATATTTTGACAGGAAGAGAATCTTGAATACTAACACTCATACTCTGCAGATTGAAGAGATTATACAACTTCTGCCGCACCGTTACACGATCTTACTGGAGGATCGCGTGCTCGacac > 1:1056562/1‑140 (MQ=255) ccGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTATTACTGGTGGATCGTGTGCTGGATTTTga > 1:409641/1‑143 (MQ=255) | GCTGCACTGGTGATGAACATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAACGTTCCATCTTTTGTTCGCCAAACTTTACGGCCTGTCTCATTCTTACGATTGCGGCAGGCCGTGTTATTATTGTCGTTTCTTATATTTTGACAGGAAGAGTATCTTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGATCGCGTGCTGGATTTTGA > NC_000913/201919‑202198 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |