New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 458799	6 (0.090)	57 (0.910)	45/276	0.3	90.7%	intergenic (+99/‑89)	clpX/lon	ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
	?	NC_000913	= 609347	NA (NA)					intergenic (+170/+112)	insL1/entD	IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex

AGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGA  >  NC_000913/609212‑609484                                                                                                                                        |                                                                                                                                          aGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAACCTACAAAACGCAATTGAAGAACGCGAGGCATAATCTTAACGAGACGCCGAGGCGTCGCATTCGTCAGATGGTTCAACACTTAAGTTAGCGCTTATGGGAgga                                                                                                                                    >  2:77844/1‑141 (MQ=11)        aGGTGGCCAGTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCg                                                                                                                             <  1:93311/143‑1 (MQ=38)             gCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGAGCATATGGGAGTAATCCCCGCatat                                                                                                                        >  1:953908/1‑143 (MQ=255)               cATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGGAATCCCCGCCTATcc                                                                                                                      >  1:1005426/1‑143 (MQ=25)                aTTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCg                                                                                                                     <  2:10972/143‑1 (MQ=255)                aTTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATGGAAGAACGCGAGGCATCGTCTTAACGACGCACCGAGGCGTCGCATTCTACAGACGGTTCGACCCGTAAGTTAGCGCGTCTGGGAGTACTCCCCCCATACCCg                                                                                                                     >  1:290552/1‑143 (MQ=11)                 ttCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTTACGAGGCACCGAGGAGTCGCATCCATCAGATGGTTCACCCCTTAAGTTAGCGCATCTGGGAGTAATCCCCGCATATCCgg                                                                                                                    >  1:184489/1‑143 (MQ=14)                  gcgggggACAGGATCACTACCAGAGTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGt                                                                                                                   <  1:1024463/139‑1 (MQ=14)                   cGTGGGACAGTATCCCTGCCAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGtt                                                                                                                  <  2:282709/143‑1 (MQ=255)                     tGGGACAGTATCCCTGACAGCCCACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgt                                                                                                                <  2:218475/143‑1 (MQ=255)                      gggactcgaTCGCTGACAGCCTACAAAACGCAATGGAAGATCGCGTGGCTGTGTCTTAACGAGGCACCGAGGCGGCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtc                                                                                                               <  1:11258/135‑1 (MQ=17)                        gACAGTGTCCCTGACAGCCTACAAAACGCAATTCAAGAACGCGAGGCATCGTCTTAACGAGGCACCGATGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTGATGGGAGTAATCCCCGCATATCCGGTTgtcag                                                                                                             <  2:185675/143‑1 (MQ=255)                         aCAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGCGGCGTCGCATTCTTCCGATGGTTCAACCCTTAAGTTAGCACTTATGGGAGTACTCCCCGCATATCCGGTTgtcagg                                                                                                            >  2:67869/1‑143 (MQ=255)                          cAGTATCCCTGACAGCCTACAAATCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtcaggt                                                                                                           <  2:220624/143‑1 (MQ=255)                                cccTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGAt                                                                                                     <  2:716928/143‑1 (MQ=255)                                 ccTGACAGCCTACAAAGCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATCCTTCCGATGGTTCGACCCTTAAGGTAGCGCTTATGGGGGTAATCGCCGCATATCCGGTTGtcaggtcaggcag                                                                                                    >  1:1062862/1‑140 (MQ=17)                                 ccTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATg                                                                                                    <  2:525354/143‑1 (MQ=255)                                     ccAGCCTCCAAACCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTaa                                                                                                <  1:305229/142‑1 (MQ=255)                                     aCAGCCGAGAGACCGCAATTGAAGGACGCGAGGCATCGTTTTAACGAGGCACCGAGGCGTCGCATTCTGCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTaa                                                                                                <  1:654783/143‑1 (MQ=18)                                       aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGACGGATCAACCCTGAAGTTAGCGCTTATGGGAGGAATCCCCGCCTATCCGGTTGTCGGGTCAGGATGGTAAgg                                                                                              >  1:909115/1‑143 (MQ=17)                                          cTACCAAACGCAATGGAAGGGCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTGAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCAc                                                                                           <  1:1014798/143‑1 (MQ=21)                                             cAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTg                                                                                        <  1:43956/143‑1 (MQ=255)                                               aaaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCt                                                                                      >  2:383102/1‑143 (MQ=255)                                                 aCGAAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGATGTGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCttt                                                                                    <  2:287866/143‑1 (MQ=255)                                                            gaaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCCGCTCTGCACTTTCGca                                                                         >  1:781378/1‑142 (MQ=255)                                                             aaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTACGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGCTGGTAAGGCACCTGCTTTACACTTTCGccc                                                                        >  2:96243/1‑143 (MQ=255)                                                                 ggatgcattgtggtAACGGGGCACGTGGGCGTCGTATTCGTCAGATGGTTCAACCCTTAAGTTGGCGCTTATGGGAGTAATCCCCGCTTATCCGGTTGTCAGGTCAGGATGGTAAGCCACCTGCTTTACACTTTCGCCCGTgc                                                                    <  1:1068963/130‑2 (MQ=25)                                                                     gCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCGCCTGCTTTCCACTTTCGCCCGTGGCCAg                                                                >  2:1033127/1‑143 (MQ=255)                                                                      cATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGt                                                               <  2:968926/143‑1 (MQ=255)                                                                        tCGTCTTAGCGAGGCACCGAGGCGTTGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGTATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGCTTAGtca                                                             <  1:454426/143‑3 (MQ=25)                                                                        tCGTCTTAGCGAGGCACCGAGGCGTCGCATTCTTCATATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGa                                                             <  1:57983/143‑1 (MQ=255)                                                                        tCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGa                                                             <  2:359742/143‑1 (MQ=255)                                                                        tCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGCGGTCAGTGa                                                             >  1:518967/1‑143 (MQ=255)                                                                          gTCTTGCCGCGGCACCGAGGCGTCGCATGCGTCAGATGGGTCGACCCTGACGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATg                                                           <  1:818709/143‑1 (MQ=255)                                                                           tCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCACGTCAGGATGGTAAGGCAACTGCTTTACACTTTCGCCCGTGGTCAGTGATgg                                                          >  2:810827/1‑143 (MQ=255)                                                                            cTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTCCACTTTCGCCCGTGGTCAGTGATGGc                                                         >  2:619204/1‑143 (MQ=255)                                                                               aaCGATGCAGCGAGGCGGCGCAGTCTTCAGATGGTTCTACCCTTAAGTTAGCGCTTATGGGAGTATTCCCCGCATATCCGGGTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGc                                                      <  1:891533/143‑1 (MQ=37)                                                                               aaCGAGGCATCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGc                                                      <  1:322590/143‑1 (MQ=255)                                                                               aaCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGc                                                      >  2:681332/1‑143 (MQ=255)                                                                                     gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGa                                                <  2:295640/143‑1 (MQ=255)                                                                                     gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGCGCGa                                                >  1:134246/1‑143 (MQ=255)                                                                                       aCCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCACATCAAGAGGTCAGGTCAGGCTGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAAt                                              >  2:702177/1‑143 (MQ=37)                                                                                            ggCGTCGCATTCTGCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTAc                                         <  2:227700/143‑1 (MQ=255)                                                                                              cggcGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCa                                       <  1:87143/140‑1 (MQ=255)                                                                                                tCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGa                                     <  1:408174/143‑1 (MQ=255)                                                                                                  gCATGCGTCAGATGGTTCAACCCTTGAGTTAGCGCGTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGTGGGCGAATCGTACCAGAtg                                   <  1:982265/143‑1 (MQ=255)                                                                                                   cATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATGATCGGGTGTCAGGTGGGGACGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgt                                  >  2:258101/1‑143 (MQ=38)                                                                                                    aTTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGCGATGGCTGCGGGCGAATCGTCCCTGAtgtt                                 >  1:325066/1‑143 (MQ=255)                                                                                                    aTTCTGCAGATGTCTCAACCCTTGTGGTAGCGCTTATGGCAGTAATCCCCGCATTTCCGGTTGTCAGGCCAGGATGGTAAGGCACCCGCTTTACACTTTCGCCCGTGTTCAGTGATGGCTGCGGTCGAATCGTACCAGAtgtt                                 <  1:1022862/143‑1 (MQ=255)                                                                                                    aTTCGTCATGTGGTGCCACCCTTAAGGTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTCTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgtt                                 <  1:953294/143‑1 (MQ=255)                                                                                                       cttcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTc                              >  1:62605/1‑143 (MQ=255)                                                                                                       cttcAGAGGGTTCAACCCTTAAGTGAGCGCGTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTc                              <  1:288544/143‑1 (MQ=255)                                                                                                         tcAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGCTGGTAAGGCACCTGCTTTACACTTTGGCCCGTGGTCCGTGATGGCTGCGGGTGAGGTGTCCCAGATGGGGTCac                            >  1:279407/1‑142 (MQ=37)                                                                                                             aTGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATCGCTGCGAGCGAATCGTACCAGATGCTGGCAAttca                        >  1:56120/1‑141 (MQ=255)                                                                                                               ggTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACATGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATc                      >  1:12574/1‑143 (MQ=255)                                                                                                                 ttCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCgt                    >  1:751697/1‑143 (MQ=255)                                                                                                                   cAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGGCGGTGATGGCTGCGGGCGAATCGTACCAGATGGTGTCAGTTAATCgtgt                  >  2:772602/1‑143 (MQ=255)                                                                                                                    agcccTTTTGTTAGCGCTTATGGGAGTAATGCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCCTACGGTTTACGGTTTCGTTAGTCTTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGtt                 <  1:495820/141‑1 (MQ=255)                                                                                                                    aaCCCTTAGGTTGGGGCTTATGGGAGTAATCCCCGCGTATCCGGTTGTCAGGTCAGGATGGTGGGGTCCCTCCATCACACTTTCGGCCCTGGTCAGTCATGGCGGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGtt                 <  2:517663/143‑1 (MQ=255)                                                                                                                    aaCCCTTAAGTTCGCGCTTATGGTAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGtt                 <  2:147807/143‑1 (MQ=255)                                                                                                                    aaCCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGtt                 >  2:572719/1‑143 (MQ=255)                                                                                                                    aaCCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGtt                 <  2:168684/143‑1 (MQ=255)                                                                                                                    aaCCCTGAAGTTAGCGCTTAGGGGAGTAATCCCCGCATATCCGGTTGTGAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCATGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGtt                 <  1:967056/143‑1 (MQ=255)                                                                                                                       ccTTAGGGTAGCGCTTATGGGAGTAATCCCCGCATATCCTGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGc              <  1:921819/143‑1 (MQ=255)                                                                                                                          tAAGTTAGCGCTTATGGGAGTAAGCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGcaca           <  2:1091653/143‑1 (MQ=255)                                                                                                                                 gcgcTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTAt    <  2:396977/143‑1 (MQ=255)                                                                                                                                   ggttATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGa  <  1:699294/141‑1 (MQ=255)                                                                                                                                   gcTGATGGGGGGAATCCCCGCATATCCGTGTGTGAGGTCAGGATGGGAAGGCACCTGCTGTACCCTGTCGCCCGTGGTCAGTGATGTCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGa  <  1:152446/143‑1 (MQ=255)                                                                                                                                        |                                                                                                                                          AGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGA  >  NC_000913/609212‑609484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.