| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3653229 | NA (NA) | 63 (1.190) | 51/284 | 0.0 | 94.0% | intergenic (‑32/‑1) | insH1/yhiS | IS5 transposase and trans‑activator/pseudogene |
| ? | NC_000913 | 4049921 = | 4 (0.080) | noncoding (24/109 nt) | spf | Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent | |||||
Only 100 of 135 total aligned reads displayed.
AGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGT > NC_000913/4049780‑4050063 | agtaagCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTATGAACTGAACAAAAAAGAGTAAAGTTAGACGCGTAGGGTACAGAGATAAGGTGTTCt > 1:360781/1‑143 (MQ=255) gtaagCAACATGAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTa > 1:128121/1‑143 (MQ=255) taagCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAGGATGTTCTAt > 2:427285/1‑143 (MQ=255) taagCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTAt < 2:448125/143‑1 (MQ=255) acatcccctccctgttccgacggcccttactgctcaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgtcctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATc < 2:199547‑M2/5‑1 (MQ=255) aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagctgacaaacaggatctcatatcagggacttgttcgcaccttccCTATCt > 2:170532‑M2/138‑143 (MQ=255) cAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaa < 2:493807‑M2/143‑5 (MQ=255) aTAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGCGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtg < 1:270957‑M2/143‑9 (MQ=255) cTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAGAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaat < 1:450762‑M2/143‑14 (MQ=255) tggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactgatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCttt > 2:419107‑M2/127‑143 (MQ=255) tCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataag < 1:817247‑M2/143‑17 (MQ=255) tgagggcgcgtactgctgagttcactgtcggcgaaggtaagttgatgactcctgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACtt < 2:329332‑M2/22‑1 (MQ=255) tgacgtcgcttactgctgaattcactgtcggcgcaggtaagttgatgactcatgatgaaccgtgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACtt < 1:31181‑M2/22‑1 (MQ=255) cGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcgg > 2:801523‑M2/1‑124 (MQ=255) gTTGTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggg > 1:317763‑M2/1‑123 (MQ=255) tttGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcgggga < 2:523123‑M2/143‑23 (MQ=255) cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCAc < 2:359130‑M2/25‑1 (MQ=255) cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCAc > 2:21161‑M2/119‑143 (MQ=255) tgATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaatt > 1:780393‑M2/1‑117 (MQ=255) tgATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaagtgcgaataatcggggaaatt < 2:692800‑M2/143‑27 (MQ=255) ttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATc > 1:494406‑M2/113‑143 (MQ=255) tGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAAAGAAAAGTTATGCGTGCAAGACACAGAGGTAAGGTGTTCTATggaaggtgcgaataagcggggagaatatt < 1:9311‑M2/143‑30 (MQ=255) gCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcgggaaattcttctc < 2:702182‑M2/143‑32 (MQ=255) tgctgaattcactgtcggcgaaggtaagttgatgacgcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCAGGTAATCGGAt > 2:473464‑M2/109‑143 (MQ=255) ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGAttt > 2:697172‑M2/107‑143 (MQ=255) ttAGCAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggc > 1:214216‑M2/1‑108 (MQ=255) tgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTACTCGAATTTg > 1:865221‑M2/106‑143 (MQ=255) gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttcgatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTgg < 1:84456‑M2/39‑1 (MQ=255) gaattcactgtcggcgaaggtaagttgatgactcatgatgaacccggttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTGATACTTCACGTAATCGCATTAgg > 1:358861‑M2/105‑143 (MQ=255) aGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAAATGTTATATgcaagattctaataagcggggaaatacttctcggctg < 1:225667‑M2/143‑38 (MQ=255) gAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctga < 2:877354‑M2/143‑39 (MQ=255) attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCt < 2:685912‑M2/41‑1 (MQ=255) attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCt > 2:886294‑M2/103‑143 (MQ=255) tATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtca < 2:711661‑M2/143‑47 (MQ=255) aTGCCACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCGATggaaggtgcgagtaagcgggggaagtgttctcggctgagtcggtcat < 1:527396‑M2/143‑48 (MQ=255) aTGCAACAACTGAAAAAAAATTTACAAAAAGTGCTTTCTGAACTGAACAAAAAAAAGAAAAGTAAGTCGGGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaactccttctcggctgactaggtcc < 1:328385‑M2/143‑47 (MQ=255) aTGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat < 1:526021‑M2/143‑48 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTa < 1:529732‑M2/51‑1 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTa < 1:746960‑M2/51‑1 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTGTACTTAACGGAATCTCATTTGGCTGCCTATGTTa > 1:287280‑M2/93‑143 (MQ=255) gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAg < 1:817113‑M2/52‑1 (MQ=255) gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcaCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAg > 1:516844‑M2/92‑143 (MQ=255) gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAtcc > 1:426575‑M2/90‑143 (MQ=255) acaacTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat > 1:711661‑M2/1‑91 (MQ=255) caacTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt > 2:402541‑M2/1‑90 (MQ=255) aacTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 2:243987‑M2/143‑55 (MQ=255) aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGACTATTTTAGCCGCCCca > 1:344148‑M2/84‑143 (MQ=255) aaaaaaTT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgcctcagtgagtgcatttcttcatg < 1:475845‑M2/143‑62 (MQ=255) gactcatgatgaaccctggtctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTaa < 1:466936‑M2/68‑1 (MQ=255) aTT‑ACAAAAAGTGCTTTCTGAACTGAACAAACAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga > 2:88190‑M2/1‑77 (MQ=255) aTT‑AAGAACAGTGCTTGCTGAACGGGACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga > 1:715214‑M2/1‑77 (MQ=255) tt‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag > 2:235699‑M2/1‑76 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatctgggacttattcgcaccttccCTATCTTTCAGACCTCTTACTTCACGTAATCGGTTTTGGCTGATTATTTTCGCCGCCCCAGCCAGTcatta > 2:813803‑M2/73‑141 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGa > 2:385768‑M2/73‑143 (MQ=255) atgaaccttgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTggg < 1:469391‑M2/76‑1 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCCGTCAGTAATGACgggg > 1:910219‑M2/68‑143 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttacCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGGTGAATATTTTGGCCGCCCCAGTCAGTAAGGACTggg > 2:854243‑M2/68‑143 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTgggg < 2:365455‑M2/77‑1 (MQ=255) gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGAGTGGGGc > 1:540827‑M2/66‑143 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCATTACTGACTGGGGCg < 1:283634‑M2/79‑1 (MQ=255) aaccctgtgctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCATTACTGACTGGGGCg < 1:760713‑M2/79‑1 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATTACTGGGGCGttttt > 2:631138‑M2/60‑143 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGAGtttttt > 2:464902‑M2/59‑143 (MQ=255) actaaactcaacAGATAAGAGTAAAGTCAGACGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc > 1:860785‑M2/2‑61 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTAt < 2:265627‑M2/87‑1 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTAtt > 2:717318‑M2/56‑143 (MQ=255) gaacAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc > 2:27001‑M2/1‑53 (MQ=255) gcaGAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct > 2:413691‑M2/2‑51 (MQ=255) acAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct > 2:817247‑M2/1‑51 (MQ=255) aaaaaaGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgagtttttctcccgtaaatgccttg < 1:725500‑M2/143‑95 (MQ=255) gatgacaaacaggatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGTATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCgaaagaa < 2:368312‑M2/99‑1 (MQ=255) aaaaGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa < 1:708557‑M2/143‑97 (MQ=255) tgacaaacatgtgctcatacgagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGaaagaaaa < 1:699172‑M2/101‑1 (MQ=255) gagTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag > 1:467781‑M2/1‑43 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccCTAACATCCAGACCAAAAAAATAACGAGATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGAt < 2:569429‑M2/104‑1 (MQ=255) agTAAGGTGAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc > 1:200205‑M2/1‑42 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGCTTTGGCTGCATATTTTAGACGCCCAAGACAGTGATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATc > 1:670818‑M2/39‑143 (MQ=255) aaaGTTAGTCGCGTAGGGTACAGCGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgcttttttctcccgtaaatgccttgaatcaccctc < 1:18615‑M2/143‑105 (MQ=255) aGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctctcgtaaaggccttgaattagcctctt < 2:164039‑M2/143‑107 (MQ=255) gTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattttagttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctattt < 2:664828‑M2/143‑108 (MQ=255) ctcatatcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGcc < 1:385768‑M2/114‑1 (MQ=255) aGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggagattcttctcggctgactcagtcatttcattgcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga > 1:617035‑M2/1‑33 (MQ=255) aGTCGCGTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga > 2:360781‑M2/1‑33 (MQ=255) gcgTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcacactatttagaccgt < 1:618686‑M2/143‑115 (MQ=255) gcgTAGGGTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatatcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgc < 1:61581‑M2/143‑115 (MQ=255) atcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGCATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATg > 2:736057‑M2/25‑143 (MQ=255) atcagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATg < 2:539027‑M2/119‑1 (MQ=255) cagggacttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATgcg > 1:863572‑M2/23‑143 (MQ=255) gggTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt > 2:450762‑M2/1‑24 (MQ=255) ggTACAGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc > 2:576728‑M2/1‑23 (MQ=255) ggAACAGAGGTAAGATGTTCTATggaaggtgcgaacgagcggggcaattctgctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc > 2:124802‑M2/1‑23 (MQ=255) tACGGAGGTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttcctaccgtaatttccttgaatcagcctatttagaccgtttcttcgc > 1:651524‑M2/1‑21 (MQ=255) cttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAGAGAATAGATGCGTAATGCCTGATGCGATTTGt > 1:290611‑M2/17‑143 (MQ=255) ttgttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATccgtaatgcctgctgaactgtttt > 1:781971‑M2/16‑134 (MQ=255) ttcgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTGTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTAt > 2:904179‑M2/13‑143 (MQ=255) gTAAGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa < 2:489309‑M2/143‑130 (MQ=255) cgcaccttccCTATCTTTCAGACCTTTTACTTCACGTAATCGGACTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATACCTGGGGCGTTTTTTATTGAGCGCAAGAAAAGATCCGTAATGCATCATGCGCTATGTTTATCa > 1:600295‑M2/11‑143 (MQ=255) aGATGTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggc < 2:261008‑M2/143‑133 (MQ=255) gTTCTATggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgtta > 2:270957‑M2/1‑7 (MQ=255) cTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTGAGCGGCCTCAGTCAGGAACCACCGGGGACTTTTCTTTTTGGCGAAAGTAACGATCCGTAATGCCTGATGGGCTATGTTTATcggttccacggt > 2:569680/1‑132 (MQ=255) | AGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATT‑ACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGTTCTATCTTTCAGACCTTTTACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTAATGACTGGGGCGTTTTTTATTGGGCGAAAGAAAAGATCCGTAATGCCTGATGCGCTATGTTTATCAGGCCAACGGT > NC_000913/4049780‑4050063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |