Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2469137	2469788	652	37 [23]	[26] 28	gtrS	serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

AGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACT  >  NC_000913/2469571‑2470027                                                                                                                                                                                                                           |                                                                                                                                                                                                                                               agCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCa                                                                                                                                                                                                                            >  2:724358/1‑239 (MQ=255)      aTAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAgg                                                                                                                                                                                                                       >  2:581996/1‑239 (MQ=255)                                     ttttcttAACATTCAAAAACAATAAATCTATGCTTTTTCTTTTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACa                                                                                                                                                                                        <  1:724358/234‑1 (MQ=255)                                                                                                    cTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAAAAACGGGAATAAAATACCATCGTAtttttgttga                                                                                                                         >  1:469158/1‑233 (MQ=255)                                                                                                                    aTTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAg                                                                                                         <  2:469158/239‑1 (MQ=255)                                                                                                                                           tgtATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTACATAAGTACCATGCAACATACTTCGGAAGTTATCTTTATATGAAAACAAACGGGTATAAAATGCCATCGTAAGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCgcc                                                                                  >  2:1269663/1‑237 (MQ=255)                                                                                                                                                     ttatattTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTTCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGt                                                                                                                                                                            <  1:730538/139‑1 (MQ=255)                                                                                                                                                     ttatattTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGt                                                                                                                                                                            >  2:730538/1‑139 (MQ=255)                                                                                                                                                                ttGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGcc                                                                                                                                         <  2:317832/163‑1 (MQ=255)                                                                                                                                                                ttGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGcc                                                                                                                                         >  1:317832/1‑163 (MQ=255)                                                                                                                                                                                       aaaTCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTGATCTTTATATGAAAAGCAACGGGTATAAAATGCCATCGTAGGTTGATGATAAGAGAGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTGGGAACGaaagtttt                                      >  1:323793/1‑234 (MQ=255)                                                                                                                                                                                       aaaTCTGTAATATGAGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTAAAACGGCGTTGTTGCTTTCAATAAGTACCATGCAACATACTTCGGTCGTTGTCTTTACATGAAAAAACTCAGGTATAACCTGCCATCGTATGTTTTTTATATGCTTTTTCGTCTAGTTGTCTGGGCTATTACATTGTCCATATCTTTTGGCGCCACCCCactagcatctggaaagtaatctta                                      >  1:220778/1‑216 (MQ=255)                                                                                                                                                                                         aTCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTa                                                                                                                                                                                                  >  2:746483/1‑81 (MQ=255)                                                                                                                                                                                         aTCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTa                                                                                                                                                                                                  <  1:746483/81‑1 (MQ=255)                                                                                                                                                                                             gTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAAt                                                                                                                                                                                                            >  2:363239/1‑67 (MQ=255)                                                                                                                                                                                             gTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAAt                                                                                                                                                                                                            <  1:363239/67‑1 (MQ=255)                                                                                                                                                                                                     cGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGGGTGTTGGGTTAAATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGGTTCAAATCTCATaaaa                        >  1:1210621/1‑238 (MQ=255)                                                                                                                                                                                                      gtggtgTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGGGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCATGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAAAAGTTGGAACGGAATGTTTCAAATCTCATaaaaa                       >  1:416734/1‑237 (MQ=255)                                                                                                                                                                                                        ggtgTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGCTAAGTGGGTTGGGATAGATGCATGGGGAAATAAATCAGACATAACATTTGGCGCAACCCCAGCAACAGTTAGAACGAAGAATTTCAAATCTAAAAAAAAta                     >  1:447292/1‑238 (MQ=255)                                                                                                                                                                                                        ggtgTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCAAATCTCATaaaaagg                     >  1:1205878/1‑235 (MQ=255)                                                                                                                                                                                                              cttgcttgCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAgtgtgt                                                                                                                 <  2:118282/141‑1 (MQ=255)                                                                                                                                                                                                              cttgcttgCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAgtgtgt                                                                                                                 >  1:118282/1‑141 (MQ=255)                                                                                                                                                                                                                      cGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGaa        >  2:786579/1‑238 (MQ=255)                                                                                                                                                                                                                      cGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAAt       >  2:979681/1‑239 (MQ=255)                                                                                                                                                                                                                      cGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGAAATAAATTCGACATATCATTTGGGGCAACCCCAACCGAAGTTGGAACGAAATGTTTCGAATCTCATAAAAATAAAACATTTTCaaaa       >  1:760532/1‑238 (MQ=255)                                                                                                                                                                                                                      cGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAAAATACTTCGGTAGTTATCTTTATATGAAAAACAACAGGTATAAAATGCCATCGTATGTTGATGATAAGTGAGTTGGGTTAGATGCCTGTGTTAATAAATTCGACATATCATTTGGAGCTACCCCAACAGAGGTTGGTACGGAATGTTTAGCATCTCATAAAAATGAAACGATTTCAAAt       >  1:294587/1‑239 (MQ=255)                                                                                                                                                                                                                           atatTTGCTATATTTTTATCAAAAGGTTGTTATGAATTAAATAAGTCCCATGCAAAATACTGTGGTATTTTTCTTTATATCAAAACCAGCGGGTATGAAATGCCATGGTATGTTGATGATAAGTTTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACACCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGATACGGTTTCGAATGCAct  <  1:1269663/239‑1 (MQ=255)                                                                                                                                                                                                                           atatTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGGTTTCGAATGCa    >  2:398148/1‑237 (MQ=255)                                                                                                                                                                                                                           |                                                                                                                                                                                                                                               AGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACT  >  NC_000913/2469571‑2470027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑