Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3798957	3799506	550	28 [26]	[13] 27	[waaU]–[waaZ]	[waaU], [waaZ]

TTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTT  >  NC_000913/3799328‑3799745                                                                                                                                                                                    |                                                                                                                                                                                                                                               tttAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATcc                                                                                                                                                                                                       <  2:1295498/221‑1 (MQ=255)           ggATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGTTGTCTTGAAGTTTAATAAATTGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATCAATTTTAATATCTTTTACATTATCATGCATACACCGAAAAAATGGACAAATTTTGAATAAATCCCTACTTAATTcctgtttcttatacaaat                                                                                                                                                                           >  1:1295498/1‑223 (MQ=255)                                                            tttCTTGTCATATCTTTTGATTCTTCTGCACTGATGACTTGAAGTTTAATAAATGGATTTCCATCGTAAGAAATAGCTGTATCATGTGTTAAATTATAAATATTAATATCTTTTACATTATCATTCATAAAACGAAAAAATGTGAATATTTTGAATAAATCCCTACTTAATTCCGCGGGCATTGGATTTTTATTCTCATCATATAAACTAGACCAGATACCCGTTAAATCAATACCaaa                                                                                                                          >  1:42212/1‑237 (MQ=255)                                                                                             aTGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGc                                                                                         >  2:458059/1‑239 (MQ=255)                                                                                                                                                                    aaTATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCa                   >  2:103378/1‑238 (MQ=255)                                                                                                                                                                          ttttACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGAATGGCATGAGCAATAACCAAGACTAATGTCCTTGCCAAATCCAACCAgac            >  2:280844/1‑239 (MQ=255)                                                                                                                                                                           tttACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAACCTCATGTCCTTGCAAAATCCAACCAgacg           >  2:970947/1‑239 (MQ=255)                                                                                                                                                                            ttACATTATCATTCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATa                                                                                                        <  2:964196/145‑1 (MQ=255)                                                                                                                                                                            ttACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATa                                                                                                        >  1:964196/1‑145 (MQ=255)                                                                                                                                                                             agacagaTCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAgacgac         <  2:202886/233‑1 (MQ=255)                                                                                                                                                                               cATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAga             <  2:591754/233‑1 (MQ=255)                                                                                                                                                                                   aTCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCa                                                                   >  2:412747/1‑175 (MQ=255)                                                                                                                                                                                   aTCAAGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCa                                                                   <  1:412747/175‑1 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATaa                                                                                                                                                                                                           <  2:273507/38‑1 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATaa                                                                                                                                                                                                           >  1:273507/1‑38 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAg                                                                                                                           <  2:987738/118‑1 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAg                                                                                                                           >  1:987738/1‑118 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACACATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCAt                                                       >  1:751949/1‑186 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCa                                                                   >  1:1058104/1‑174 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCa                                                                   <  2:1058104/174‑1 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCAt                                                       <  2:751949/186‑1 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCa                                                  <  2:1302147/191‑1 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCa                                           <  2:320668/198‑1 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCa                                           <  1:976843/198‑1 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCa                                           >  2:976843/1‑198 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCa                                           >  1:320668/1‑198 (MQ=255)                                                                                                                                                                                    tCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAAAACAGCTACCCGTTAAATCAAGACCAGAACAATTAATCAGCGCATACTTAAGTGAATATGCAATTTGAATTGCAGCAAAGTCAATAGAATGGCAGTAGCAATAACCAAGACTAAGTTCCTTGACAAATTCAAcaacaagacactgtta  >  1:591347/1‑224 (MQ=255)                                                                                                                                                                                    |                                                                                                                                                                                                                                               TTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACTGATGTCTTGAAGTTTAATAAATGGAATTACATCGTAAGAAATAGCTGTATCATCTGATAAATTATAAATATTAATATCTTTTACATTATCATGCATAAAACGAAAAAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTT  >  NC_000913/3799328‑3799745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑