Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,206,450 C→A 16.3% intergenic (‑196/‑11) ttdR ← / → ttdA transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4500CA16.3% 150.7 / 4.1 72intergenic (‑196/‑11)ttdR/ttdAtranscriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base C (6/47);  new base A (9/3);  total (15/57)
Fisher's exact test for biased strand distribution p-value = 2.53e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGG  >  NC_000913/3206217‑3206686
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                        
ttcgtgcaGTTTTTGGCTAAAGGCCAGCTTTTCAGCATCGTTAATTCTCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                                                                                                                                                  <  1:928828/232‑1 (MQ=255)
aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAg                                                                                                                                                                                                                                                  <  2:784985/239‑1 (MQ=255)
         tCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGCCAAATAAAAAAAATGGAGTTGCCatga                                                                                                                                                                                                                                       >  2:225737/1‑239 (MQ=255)
             tGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTCAGACAAAATAAAAAAACAGAGGTGGCATGATTAg                                                                                                                                                                                                                                 >  2:455370/1‑239 (MQ=255)
                 tAAAGGCCAGGTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                              <  2:1056758/238‑1 (MQ=255)
                 tAAAGGCCAGCTTTTTAAGATTGTTAAATTTGCGCAGTTGGGAAAAGCGCAATGTATTTCGCAAAACATTGCCATTCCCTGGTCTGGCGCAATATTTATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATAGTCACGGGGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTTGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                              <  1:85908/238‑1 (MQ=255)
                 tAAAGGCCAGCTATTCCGCATCGTTAATTATCCGCAGTTGGGATAAGCCCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                              <  2:949949/238‑1 (MQ=255)
                 tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                              <  2:989127/238‑1 (MQ=255)
                 tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGAAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                              <  2:822593/238‑1 (MQ=255)
                 caaaGTCCGGGTATTCACCCTCGTTTATTCTCCGCAGTTGTTATTAGCGAAGTTTATTTCCAAAAACATTGCCCTTCCCTGCTTTGGCTCCAAATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTTATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGa                                                                                                                                                                                                                              <  1:970451/237‑1 (MQ=255)
                   aaggcccggtttttcgcatgtttAATTTTCCGCAGTTTTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAg                                                                                                                                                                                                                           <  1:455370/218‑1 (MQ=255)
                   aaagccctttatttcagaTCGGTTATTTTCCGCAGGTGGTATAAGGGCAGTGATTTTCGCAAAACCTTTCCGTTCCCTGTTCTGGCGAAATATTAAGTCTTATTTTCGAGTTGATTCACGACCTTTTAATTACATATTCACGGTGGCAAAAAATATAAAACCTCATTTTTAGTTGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATTCACAAACCGGGGTTGCCATGAGGATCGATAg                                                                                                                                                                                                                           <  1:599061/222‑1 (MQ=255)
                        cccttttttacgctttttAATTGTCCGCTGTTGTGATAAGCGCAGTTTTTTTCACAACACATTGCCATTCCATGCACTGGAGAAATATTCATTCTTATTTTCGCATTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATGTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                       <  1:1216454/222‑1 (MQ=255)
                        cAGTTATTCTGCATGTTTAATTCTCCGCATTTGGGATAAGTCTAGTTTATTTCGCAAAACATTGCCATTCCCGGGTCTGGCGCAATATGCATTCTTATTGTCGCATTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                       <  1:39052/238‑1 (MQ=255)
                        cAGTTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                       <  2:677168/238‑1 (MQ=255)
                        cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                       <  2:599807/238‑1 (MQ=255)
                        cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                       <  2:191506/238‑1 (MQ=255)
                                  gtcttgTTAATTTGCCGCAGTTGTGCTAAGGGCAGTGTTTTTGCCAAAACATTGCCATTCCCTGCGCTGGCGCAATATTCATTCTTATTTTCGCGGTGATTCACGAACTGGTAAGTACATATTGACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGc                                                                                                                                                                                                          <  1:416545/234‑1 (MQ=255)
                                  gctttttttattttcccggtttGGGAAAAGCGCAGTTTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCGCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGc                                                                                                                                                                                                          <  1:48755/219‑1 (MQ=255)
                                   cATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCCATCCAAAATAAAAAATTGAGTTGTCATGATTAGGGGAAGAAAAAAACAAAAgaac                                                                                                                                                                                                          >  2:291498/1‑236 (MQ=255)
                                         tAATTTTCCGCCGTTGTGATAAGCGCCTTTTATTTCTCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAAt                                                                                                                                                                                                  <  1:1247563/239‑1 (MQ=255)
                                         tAATTATCCCCAGTTGTGATAAGCGAAGTGTATTTCGGAAAACCATGCCATTCCCTGCTCTGGCGCAATATTCATTCTTAGTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                                                                                                                                                   <  2:77305/238‑1 (MQ=255)
                                                 cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCAAAAAAAAAAAAAAAACGGAGATGTCATTATGAGGGAAAGGAATAATAAACAGACAAGGAATAAATTgtc                                                                                                                                                                                          >  2:884001/1‑237 (MQ=255)
                                                      ttGTGTTAAGCTCGTTTTTTTTCCCAAAACTTTGCCATTCCCTTCTCTGGCGCAATATTCCTTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                                                                                                                                                     <  1:153035/239‑1 (MQ=255)
                                                       tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGAGTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                                                                                                                                                    <  2:319895/239‑1 (MQ=255)
                                                           aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATaa                                                                                                                                                                                                <  2:573673/223‑1 (MQ=255)
                                                                cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCTGACAAAAACAAAAAATGGGGTTTGCCTGGTTAGGGGAAGTAATAAACAACAAGCAAGGGAAAAAATGACAGAGATTGTCGCTaa                                                                                                                                                                          >  2:685558/1‑239 (MQ=255)
                                                                                 aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAATACAAAAACAGGAGGTGCCCTGATGAGCGGAAAGAATAAAAAACAAGCAGAGAAAAAGATGACAGAGATTGTGGCTAACTTTACCGCCATGGttt                                                                                                                                                        >  2:497336/1‑239 (MQ=255)
                                                                                 aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCAACAAAATAAAAAACTGGGGTTTCCCTGGTTGTCGGAAGTAATAAACTAAAAGCAGGGAAAAAAGTGAACAGGAATTGTGCTTACCTTTACCCCCagaatt                                                                                                                                                         >  2:1320336/1‑234 (MQ=255)
                                                                                 aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCATACCAATAAAAAAAATATAGTTGCCCTGATTAGCGGAAGTAAAAAGAAACAAGCAAGGAAAAATATGACAAAAGATGTTGCTCACCTTACCTCCCTGAttt                                                                                                                                                        >  2:851303/1‑239 (MQ=255)
                                                                                   cATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                       <  2:78684/179‑1 (MQ=255)
                                                                                         cATTCCCTGCTTGGGCGCAATTTTCATTCTTATTTTCGCGTTGATTCACGAACTTTTAATTACATATTCAGGGTGGCAAAAAATAAAAACCCACATTTTTAGTGGTAGTTTGGGGCGGTGAATTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                                                                                                                                                <  2:31256/239‑1 (MQ=255)
                                                                                             cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTAATATTTTTCGACCAAAACAAAAAATGGAGTTGTCATGATGTGGGGAAGAAAAAAACAAACACAAGTGAATAAGATTACAAAGATTGTTGCTAATTTTATCCACCTCATTTCTTcccccaaca                                                                                                                                            >  2:1277090/1‑233 (MQ=255)
                                                                                                  ctctGGCGAAATATTCATTCTTATTTTCGCGTTGATGCAAGAACTGTTAATTACATATTCAGGGGGGAAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCAAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTAc                                                                                                                                                    <  2:1451/226‑1 (MQ=255)
                                                                                                             tatTCTTTTTGATTTTCGGTTTGATTAACGAACTGTTAATTACATATTGACGGGTGCAAAAAATATAAAACCACATGTTGAGTGTTATTTGGTGGCTGTGAATTTGTCCAGACAAATACAAAAGCGGGAGTTGCCATGATGAGGGAAAGTAATAAGCAACAGGAAGTGAAAAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                            <  2:1282646/239‑1 (MQ=255)
                                                                                                             tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                                                                                                                                                <  2:857478/160‑1 (MQ=255)
                                                                                                                      ttATTTGCGGTTTGATTCACGAACTGTTAATTACATATTCCGGGGGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAAAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGAAAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaa                                                                                                                   <  2:1321586/239‑1 (MQ=255)
                                                                                                                       tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGACAAAAAATAAAAACCCACATTTTTAGTGGTAGTTTGTGGCGGTAAATTTTCCCAGAAAAATAAAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                  <  2:1155511/239‑1 (MQ=255)
                                                                                                                       gggagatgtgtataaaggacagcTGTTAATTAAATATACAGGGAGAAAAAAAATAAAAACCACAATTTTTAGTGGTAGTTGGGGGGGGGAAATTTTTCAAGAAAAATAAAAAAAGTGGAGTTGCCATGAGGAGCGAAAGAAAAAAGCAACGGGCATAAAATAAGTGGACAGAGTTTGTCCCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                  <  2:1233766/217‑1 (MQ=255)
                                                                                                                            tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCCGACAAATACAAAAAAATGAGTTTCCATGATGAGCGGAAGAAATAAAAAACAAGCAGGGAATAAAGTTTCAGAGATTTTCGCTTACATTTACCCCCTGGTTTTTATCCGAAAGCCTGATGACGTGGGGGGtaaaataaaaaaact                                                                                                             >  2:406976/1‑234 (MQ=255)
                                                                                                                                         cGATCTTTTAATTACATATTCAGGGTGACAAAAAATATAACACAACTTTTTTGGTGGTATTTGGTGGCGGTGATTTTTCCCAGACAAATAAAAAAACTGGATTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCTTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGaa                                                                                                <  2:131391/239‑1 (MQ=255)
                                                                                                                                                  aaTTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCt                                                                                                                                                                             <  2:499028/155‑1 (MQ=255)
                                                                                                                                                        ttttagggggaaaaaaaaaaTAAAAACCAATTTTTTGGGGGTTGTTGGGGGGGGTAAATGTTCCCAGAAAAAACAAAAAACGGGAGGTGCTGTGATGGGCAAAAGAAATAAGCAAGAGGAAGTAAATAGGTGGACAGATCTTGCCGCTATTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                <  1:884001/225‑1 (MQ=255)
                                                                                                                                                        atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATACAAAAAAAGGAGGTTGCCTGATGAGGGAAAAGAAAAAACAAAAGGCAGAGAATAAGATGAAAGAGAGTTATGGTAAATTTTCCGCCCTGAATTTTTCCCGAATGACTGCTGAAGTGGTGGGTGAAAAAAAACAACTAAAGGGTGCCGCAACAACGTCGTCgggg                                                                                 >  2:836585/1‑239 (MQ=255)
                                                                                                                                                         ttttccgggTGGAAAAAAAAAAAAACCAAAATTGTTGGTGGTAGTTGGGGGGGGTAAATGTTACAAGAAAAAAAAAAAAGTGGTGGTGGCCATGAAGAGCGAAATGAATAAGAACATGGCAGTGAATAAGTGGAAGGAGTTTGGCGTAAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                <  1:1320336/232‑1 (MQ=255)
                                                                                                                                                         tttgtgggggggaaaaaatTAAAAAACCAAATTTTGGGGGGATTGTGGTGGGGGTAAATTTTCAAAAAAAAAAAAAAAAACGGGGTTGCCAAGAATGAAGAAATGTAAAAACAACAGGGAGTGTAATAGGTTGACAGATATTGTCGTAATTTTTACCGCCATGATTTCCACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                <  1:483071/226‑1 (MQ=255)
                                                                                                                                                         ttgtCAGGGTAGAAAAAAATAAAAACCCAAATTTTAGGTGGTAGTTTGGGGCGTTGAATTTTACAAGAAAAAAAAAAAACCGGGAGTTGCATTGATGAGAAAAAGTAAAAAGCAACAGGAAGTAAATAATTTAAAAAAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                <  2:881361/236‑1 (MQ=255)
                                                                                                                                                         tatTCAAGTTGGCAAAAAATAAAAACCCACATTTTGAGGAGTA‑‑TTGTGGTGGAGTAATTTTTCCCAGAGAAATACAAAAACGGGAGTTGCTAGGAGGAGCGAAAGTACAAAGCACCAGGCAGAAAATAAGTTAACAGAGATGCTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                <  2:1316716/239‑1 (MQ=255)
                                                                                                                                                         atttccgggttgaaaaaaaTAAAAACCCCAATTTTAAGGGTTATTTTGGGGCGGTAAATTTTTCCAAACAAATAAAAAAACTGGGGTGGCAATGATGAGCAAAAGAAATAAGAAACGGGCAGTAAATAAGTTGACAGAGATTGTCGTTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                <  2:370095/226‑1 (MQ=255)
                                                                                                                                                           ttCACGGTGACAAAAAATAAAAACCCAATGTTTGATGTGTAATTTGTGGCGGTAATTCTCAACAGAAAAAAAAAAAATGGGAAATGGCAATGATGTGCAAAAGAAAAAAGCAACAGGAATTGAATAAGTTGAAGGAGATTTAGTCTAAGTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                <  2:1260178/237‑1 (MQ=255)
                                                                                                                                                            tCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAAACAAAAACAAAAACTGGTGTTTCCATGGTTAGGGGAAAAGATAAAAAACAGGCAAGGGATAAAATGTAAGAGATTGTTGCTCACTTTTTCCCCCTGATTTCTACCCCCATGCCTGTTGAACTGGGGGAGAAACTAAAACAACTAAAAGAAGTCGAAAAGCCTCTGATGGGGgaaa                                                                             >  2:982406/1‑239 (MQ=255)
                                                                                                                                                              cggggggaaaaaaaTATAAACCCCATTTTTAAGTGGTAGTTTGGGCAGGTGAATTTTTCAAGACAAATACAAAAACGGGATTTGCCATGATAACGGAAAGAAAAAAGCAACGGGCAGAAAATAGGTTAACAGGGATTGGCCCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                           <  2:263352/231‑1 (MQ=255)
                                                                                                                                                                ggTGGAAATAATTAAAAAACCATTTTTTTTGTGTTTGTTGCGGGTGGTTAATTTTTCCAGAAAAATGCAAAATGTGGAGTTGCCATGGTGGGGAAAAGTAATAAGCAAGAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                         <  1:119881/239‑1 (MQ=255)
                                                                                                                                                                aaaagagaaataTAGAAACCCACATTTTGAGTGGTATTTTGGGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                         <  2:99919/232‑1 (MQ=255)
                                                                                                                                                                 gTGGAAAAAAATAAAAAACACATTTTGTAGTGGTATTTTGGGGAGGAGAATTTGCCCAGAAAAAAAAAAAAACTGGATTTGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTTTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt                                                                           <  2:573467/236‑1 (MQ=255)
                                                                                                                                                                    gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCAAACAAAAAAAAAAAATTGAGTTGCCCCGGTGAGCGGAAAGAATAAGCAAAAGGCAGGGAATAAGTTGAAAGAGAGTTTTGCTAAATTTACCCCCCTGATTTTTACCCGCATTGCTGTGTACGTGGTGGGTAAACTTAAAAAACTCAAGGATAGCCAAACGTAGTCGATGGGGGAAAATATCTa                                                                      >  2:948919/1‑238 (MQ=255)
                                                                                                                                                                    aaaaaaaaTAAAAACCCACTTTGTTGGGGTTATTTGGGGGCGGTAAATTTTTCAAAAAAAATAAAAAAACTGGGGTTGCCATGATGAGGGAAAGTAATAAGCAACGGGCAGTAAATAAGTTGACAGAGATTGGCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTa                                                                      <  2:249766/236‑1 (MQ=255)
                                                                                                                                                                          aaTATAAACCCCAATTGTTAGTGGTGATTTGGGTGGGTGAATTTTCCCAAAAAAATACAAAAACTGGAGTTGCCATGATGAGAGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                               <  2:498943/239‑1 (MQ=255)
                                                                                                                                                                            aataAAACCCAATTTTTGAGGGGTATGTTGGGGGGGTGAATTTTCCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGa                                                              <  2:816851/238‑1 (MQ=255)
                                                                                                                                                                              aaaaaCCAGTTTTTAAGTGGTAGTTGGGGGGGGTAAATTTTCCAAGAAAAATAAAAAAACGGGAGTTGCAATGAGGAGAGAAAGTAAAAAGCAACGGGAAGTAAATAAGTGGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGt                                                           <  2:15825/238‑1 (MQ=255)
                                                                                                                                                                                   ccACATTTTTAGTGGTATTTTGTGGCGGTGAATTTTTCCAGAAAAATAAAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCt                                                                                                                                                      <  2:982238/143‑1 (MQ=255)
                                                                                                                                                                                   accatttttttAGGGTGTTTTGTGGGCGGGAATGTTTCCAAAAAAAAAAAAAAAATGGGAGTGTCAATAGTGAGGAAAAATAATAAGCACAGGTCAGTAAATAAGTAAAAGGGGTTTTCTCTAAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGa                                                       <  1:982406/233‑1 (MQ=255)
                                                                                                                                                                                         attttgtgtgtgttttttgggggCGGTAAATTTTCAAAAAAAAATAAAAAAAGTGGATTTGCTAGTATGAGCGAAATAAAAAAGAAACAGGGAGTAAATAAGTTGAAAGAGGTTGGAGATAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                    <  1:291498/218‑1 (MQ=255)
                                                                                                                                                                                                       atttttTGGCGGTGAATTTATCAAGACAATATGACAAAGTGGGGTCACACTTATGAGAGAAATTAAATGACAACAGGCAGTGAATAAATAGACAGGGATTGTCTATTATTTTTCCGCCCTGATTTCTCCCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                      <  2:1192264/237‑1 (MQ=255)
                                                                                                                                                                                                        tttttTGGGGGTTAAATTTTCCAAAAAAAAAACAAAAAATGGATTGGCATGATAAGGCAAAAGAAATGAGAAACGGTCAGTAAATATGTAGAAAGAGATGGTCGCTCATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTCAAGGATGCCGAAACGTCGGCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                      <  1:800417/238‑1 (MQ=255)
                                                                                                                                                                                                         tttttggggggtgtaaTTTTTCCAAAAAAAAACAAAAACGGGAGTTACCAGTGAGAGAAAAAGTAATAAGCAAGAGGAATGAAATAAGTGGACAGAGATGGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                      <  1:138284/225‑1 (MQ=255)
                                                                                                                                                                                                            gtgtCGGTGAATTGTTCCAAAAAAAAAAAAAAACGGGGGTTGGCAGATGGAGAGAAAGGAAAAACCAAAGGGGAGTAAATAAGTTGACGTGGATTGTCGCAAATTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc                                 <  1:234195/239‑1 (MQ=255)
                                                                                                                                                                                                                              tttcaaaaaaaaTAAAAAAACGGGAGTGGCCATGATGAGCAAAAGTAAAAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                    <  2:1291857/230‑1 (MQ=255)
                                                                                                                                                                                                                                cAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcct                 >  2:737851/1‑238 (MQ=255)
                                                                                                                                                                                                                                 caaaaaaaaTAAAAAATTTGGAGTTGCCATGATGAGCAAAAGTAATAAACAACAGGCAGTGAATAATTTGACAGAGTTGCCCGCTACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcct                 <  2:998544/233‑1 (MQ=255)
                                                                                                                                                                                                                                        aaTACAAAAACTGGATTTCCCATACGGGGCAAAAGTAATAAGCAACGGGCAGGGAATAGGTTGACAGGAATTGCCGCTACCTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGa          <  2:624293/239‑1 (MQ=255)
                                                                                                                                                                                                                                               aaaCTGGAGTTGCCATGATGAGCGACAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTCAAACAGCTAAAGGATGCCGAAACGTCGTCGCTGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGCCCTGAATCGTCCGCCCTGTCAgacacacggg   >  1:350871/1‑230 (MQ=255)
                                                                                                                                                                                                                                                agcTGGAGTTGCCAAGAAGGGCAAAAGTAAAAACAAAAGGGCAGTAAATAAGTTGAAAGAAATTGCCGCTATCGTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg  <  2:750759/237‑1 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                        
ACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGG  >  NC_000913/3206217‑3206686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: