| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,201,277 | A→C | 19.0% | G137G (GGT→GGG) | zraP ← | Zn‑dependent periplasmic chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,201,277 | 0 | A | C | 19.0% | 158.8 / 3.8 | 71 | G137G (GGT→GGG) | zraP | Zn‑dependent periplasmic chaperone |
| Reads supporting (aligned to +/- strand): ref base A (49/6); new base C (3/13); total (52/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.92e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCTT > NC_000913/4201046‑4201514 | gcTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCCTGGCTGGAACCGCCCGAAAGTTCGCAATTACTGTTAGTGGCAAA‑CCCTGTTTTCTGTCGCTGGCAACCAAACGGACAAACGGCTTGATTTCCACGTGGcccacccccataa > 1:1312075/1‑238 (MQ=255)gcTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAATGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGccacaacccatag > 2:892099/1‑238 (MQ=255) cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGcccataccccgtt > 2:203410/1‑234 (MQ=255) cTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATg > 2:58146/1‑239 (MQ=255) tGGCATGCGATGGAACAGGCCGTGACCACCTGGGAAGGGCAACCCATTAAACCTGATTTAGATTCGGAGGCGATAGCGCATTTCGAGCGCCGCCAGACCCGCTTTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATg < 2:963658/238‑1 (MQ=255) gggggtgaaactgcacggcacacccTGCGAAGGGCAAACGATTAACCCTAATTGAGATGCGCAGGCAATAGGGCACAGCGGGGGCCGCCAGGGCAGCTTTTCTGGTGATTTCAGCGTGGCATGGCTGGAAGCGACCGAAGGTTCGCATTTACGGTTAGGGGAAAC‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCGCTACCCATATGAgcgc < 1:524423/215‑1 (MQ=255) gggtaaCAGTCCGGCACCCCCGGGGAGGGGAAACCCATCAACCCTGATTTAGATGCGCAGGCGTTAGGCAATTGCGGGCGCCCGCAGGGCCGCTCTTCTGTTGAGGTCAGCGGGGCATGGCGGGAAGCGCCCGAAGGTCCGAAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGccacc < 1:772623/234‑1 (MQ=255) aCCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAgcc > 2:633352/1‑238 (MQ=255) aCCGTGACCACCTGCGAAGGGCAAACCATTAAACCGGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGACGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCGGTCAACCCAACCAGAAAAGGGTCTGTTTTACAAATGGcccctacccaacagacacccccaaacccaagc > 1:1104878/1‑216 (MQ=255) cGTGACCACCTGCGAAGGGCCAACCATTAAACCTGATTTAGATTCGCAGGCGAGAGCGCATATCGAGCGCCGCAAGAGCCGCTCTTCTGTTGATGTCAGCGGGGCATGGCGGGAACCGCCGGAAGGCTCGCACTTACTGTTAGTTGCACA‑CGCTGCTTTCTGTCCCAGGCACGCAAACAAGGAACGCTTGTGGTTTACCAGTGGGCCCCCCCCATATGaacacaaccccagcaccacgg > 1:1058289/1‑219 (MQ=255) cGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCCCCTCAgccgcc > 2:882541/1‑239 (MQ=255) cGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTCATTTACCAGTGGCCAATACCCCTTTTACCGCccccactcacaccccc > 2:1141487/1‑229 (MQ=255) ggcacccatgtagaatgcaatagcATTAAACGTTATTTAGGTGCGGAGGTGATCGCGATAATGGAGCGCCTCCAGACCCGCTCTGCTTTTGATGTCAGTGGGGCATGGCTGGAAGCGCCGAAAGGTCCGAAATTACT‑TTTGTTGCAAATCTCTGATTTCTGTCCCTGGCAACCCAACGAGAAAACGTTCTGTTTTACCATTGCCCCATCCCCATTTGACCGCCACCTCCGCAGccgccg < 1:1196086/216‑1 (MQ=255) tGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCACA‑CTCTGATTTCTGTCGCTGGCAACCCACCGAGAAAACGTTCTGATTTACCACTTGCCACTACCCATATGACCCCCaccacccaccccccccc > 1:292411/1‑228 (MQ=255) tGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGt > 2:229338/1‑239 (MQ=255) tGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCACTGGCCCATACCCATATGACCGCCACAACCGCAACCGCCGt > 2:967991/1‑239 (MQ=255) gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGGTTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGccgccgga > 2:666237/1‑237 (MQ=255) gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTCTTGATTTTCCAGTGGCCCCTCCCCATATGACGCCCACCACCACGGCAACCGTa > 2:194377/1‑239 (MQ=255) gACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAAAGTTCTGATTTACCAGTGGCCCATACCCATAGGACCGCCACCACCGGACCCGCCGTa > 2:987011/1‑239 (MQ=255) cGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGCAAGCGACCGAAGGTTCGCAATTACTGTTACTGGCCAA‑CTCCGAGTCCTGCCCCTGGCAACCCAACGGGAAAACGTTTTGATTTACCAGAGGCCCCAACCCCAAACAAGCCCACCACCGCAgcccaccaagccccatc > 1:231515/1‑224 (MQ=255) gAAGGGAAAACCATTAACCCTGATTTAGTTTCGCGGGCGATAGCGCATATCGAGCGCCGCAAGGGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCCCCCGAAGGTTCGAAATTACTGTTAGTGGAAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGGGGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAgcccatgcc < 2:1008630/238‑1 (MQ=255) cAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGCCCGCCACCACCGCAGCCGCCGTAACCCATGCCCATTcc > 2:757656/1‑238 (MQ=255) tAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CCCTGATTTCTGTCGCTGGCAACCCAACGAGCAAACGATCTGATTTACCAGTGGCCCATCCCCATATGACCCCCCCCACCGCCTCCGCCGCAACCCACTCCCATTCCCGCCCcccg > 1:1017887/1‑239 (MQ=255) gATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGACGCGCCCGAAGGTTCGCACTTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTCCCAGTGGCCCATACCCATATGACCCCCACACCCCCACCCCCCGAACCCCCTCCCCCTTCCgcgtcccccccgaaa > 1:1194786/1‑224 (MQ=255) gATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAAt > 2:640485/1‑238 (MQ=255) aTTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATa > 2:561122/1‑238 (MQ=255) aTTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCCCCGCAGCCGCCGTACCCCACGCCCATTCCgcgcccccccggaaaaacgcct > 1:150213/1‑217 (MQ=255) gCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATTCCCATTCCGGCTCCGCCCGGAATACCCGCCTCAg > 2:254367/1‑238 (MQ=255) aTAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAACCGTTCTGATTTACCACTGGCCCCTACCCATATGACCGCCACCACCGCAGCCGCCGGAGCCCATACCCCTTCCGCCTCCCCACGGCAAAACCCCTTccccccccccg > 1:910278/1‑229 (MQ=255) atCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCCTGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGCCGCTGGCAACCCAACGAGAAAACGTTGTGATTTACCAGTGGCCCATACCCATATGACCACCCACACACCAACCGCCGTAGCCAATCCCCATACCGGCCCCGCGCGGAAAACCCCCCTCAcccccaccaaaaccacgt > 1:612040/1‑224 (MQ=255) atCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCCCGCGGAATACCCGCTTCAGCCATCGCGATATCCCGt > 2:64311/1‑239 (MQ=255) aGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCCGGCAACCCAACGAGAAACGGTTCTGATTTACCAGTGGCCCATACCCATATGAACGCACCCACCGCCGCCGCCGTAGCCCCTGCCCATTCCGGCTCCGCGCCGAATAACCCCCTCAACCCCCCCGGTAACCCGTTTc > 1:717691/1‑238 (MQ=255) gcgcCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCa > 2:28360/1‑238 (MQ=255) cgccgcCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATCCCGGCTCCGCGCGGGATACCCGCTTCAGCCATCGCGATATCTCGTTTCAc > 2:664313/1‑238 (MQ=255) gATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑ATCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACGGCACCAGCAGCAGCCCATGCCCATTCCGGCTCCGCCCCGAATACCCGCTTCCGCCAACGAGATATCTCGTTTCAACCGCaaacaacacaaaaaccgacgc > 1:633677/1‑220 (MQ=255) gTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCCTTCCGGCTCCGCGCGGCATACCCCCTTCAGCCATCGCGATATCTCGTTTCACCCGTACACCATCTAACGACTGACGCa > 2:1148632/1‑237 (MQ=255) gTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCaaa > 2:175000/1‑239 (MQ=255) ggCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCtt > 2:461550/1‑239 (MQ=255) cTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAACCCATCCCCATTCCGGCTCCGCCCGGAATACCCCCCTCCGCCATCGCGAAATCTCGTTTCACCCCTAATCCATTTAACGCCTGCCCCAAATTCTCCA‑CTCtttt > 1:1043659/1‑237 (MQ=255) cTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTCACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGCATACCCCCTTCAGCCATCGCGATATCTCGTTTCACCCCTAACTCATCTACCGACTGTCGCACATTCTcccccccttt > 2:331476/1‑230 (MQ=255) cccGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGCTTTCTGTCGCTGGCAACCCAACGAGACAACGTTCTGATTTCCCAGTGGCCCCTACCCATATGACCGCCAACACCCCAGCCGCCGTAGCCCATGCCCATTACGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCCCGTTTCACCCGTAACTCATCTAACGCCTGCCGCAAATTCTCCCTCTCTTTGGcacccg > 1:885165/1‑232 (MQ=255) cccGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACcccg > 2:1070802/1‑239 (MQ=255) ttCGTAATTCCGGTTAGGGGCAAC‑CTTTGATTTCTGGCGCTGGACACCCAACGAGAAAACGTTCTGATTTCCCAGTGGCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAAttt < 2:1104878/238‑1 (MQ=255) cGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCCCGCTACCTCGTTTCACCCGTAAATCATCTAACGACTACCCCCAATTCCCCAACTTTTTGGCGAccccctcacatttcc > 1:138207/1‑226 (MQ=255) ttgcTGTTAGTGGAAAC‑CTCTGTTTTTGGTCGCTGCCACCCCAACGAAAAAACGTTCTGATTTACCAGGGGCCCATCCCCATATGCCCCCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTa < 2:1312075/236‑1 (MQ=255) cacaggTTAGTGGCAAT‑CTCTGTTTCCGGTCGCTGGCAACCCAACGATAAACCGTTCTTATTTACCAGTGGCCCATCCCAATATGCCCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCAACCGCGTTAATTTtgctgc < 2:622283/232‑1 (MQ=255) gTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGTTGCTATCCgg > 2:635480/1‑239 (MQ=255) aGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGGAGCCCAGGCCCATTCCGGCTCCGCGCGGAATACCCCCTTCCGCCAACGCGATATCCCGTTTCACCCGTAACTCATCTAACGTCTCACGCCCATGCCCCCTCTCTTTTGCGACCCAGTTAATTTtgttgcgaccgggggg > 1:672223/1‑229 (MQ=255) gCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCCCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGtt > 2:1158439/1‑238 (MQ=255) cAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTcg > 2:910224/1‑239 (MQ=255) a‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCCCGGAATACCCGCCTCAGCCATCCCGATATCTCGTTTCACCCGTACCCCACCTAACGACTGCACCAAATTCTCCATCTCTTTGCCACACGCGTTAATTTTCCTCCTATCCgaggggctgtg > 1:622283/1‑227 (MQ=255) tgattcgttgcGCCGGCCACCCAACGAGAAAACGTTCTGATTCACCAGTGGCCCATCCCCATATGACCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTaa < 2:757472/229‑1 (MQ=255) tGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCTCGGCTaa > 2:361066/1‑239 (MQ=255) tGATTTCTGCCGCTGACAACCCAACGAAAAACCTTTCTTATTTCCCGGGGCCCAATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTaa < 2:231515/239‑1 (MQ=255) ttttGTGTCCCTGGAAACCCAAGGGAAAAACGTTCTGTTTTACCAGTGGCCCATCCCCATAGCACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACa < 2:1043659/238‑1 (MQ=255) aTTTCGGTCGCGGGCACCCCAAGGAAAAACCTTTCTGATTTCCCAGGGGCCCATCCCCATATGACCGCCCCCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACa < 2:150213/239‑1 (MQ=255) cTGTCCATGGAACCCCAGCGAAAAACCGTTCTTATTTCCCAGGGCCCCATACCCATATGCCCGCCCCCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGc < 2:1116084/239‑1 (MQ=255) gTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCCCCCGTAACTCACCTAACGACTGACGCAAATTTTCCATCTCTTTGGCGCCCGCGTTAATTTTGCTGCATTCCGGAGGGttggggggaaaacgggcat > 1:297130/1‑222 (MQ=255) gTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCCCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTTGCGACCGCGTTACTTTTGCGACTATCCGGGGGGTTCCAGGCTAACAGGGCAt > 1:533641/1‑239 (MQ=255) ccgcggccAACCAAACGAGAAACCGTTTGGATTACCCAGTGGCCCATCCCCATAGGACCGCCCCCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCAtt < 2:885165/232‑1 (MQ=255) ccTGGCACCCCAACGAGAAACCTTTCTGATTTCCCAGTGCCCCATCCCCATAGGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGt < 2:292411/238‑1 (MQ=255) gggcacccaaacagaaaaaCGTTCTGATTTCCAGGTGCCCCATACCCATAGGCCCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTAt < 2:1017887/224‑1 (MQ=255) aaCGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATACCTCGTTTCACCCGTAACTCATCTAACACCTGACGCAAATTCCCCACCCCTTTGGGGACCCCGTTATCTTTGCTGCTATCCGGGGGGTTCGCGGCTAATCGGGCATTGTATTCATAAc > 1:1053102/1‑237 (MQ=255) aCGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCt > 2:590527/1‑85 (MQ=255) ctcttgttcaCCAGGGGCCCATCCCCATAGGACCGCCACCCGCCCACCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGt < 2:270182/230‑1 (MQ=255) tCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGtt > 2:1150180/1‑239 (MQ=255) tACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGGATTCATAACGCTTCGTCACCAGTTGCTGTTg > 2:1167438/1‑239 (MQ=255) ggTGCCCCATACCCATATGACCGCCACCCCCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGt < 2:1291871/238‑1 (MQ=255) gTGGCCCATACCCATATGACCGCCACCACCTCAGCAGCCGTAGCCCATGCCCATTCCGGCGCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCCAATTCTCCATCTCTTTTGCGACCGCGTTAATTTTGCTGTTATACGGTGCGTTCGCGGCTACCAGGGCTTTGTATTCATAACGCTTCGTCACCCATTTCTTTTGCAggg > 1:905002/1‑237 (MQ=255) ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATaa > 2:166434/1‑209 (MQ=255) ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGGATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTgc > 2:23296/1‑238 (MQ=255) ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAAACGGGCCTTGTTTTCATAACCCTTCGTCACCATTTCCGGTTgagggggg > 1:1164465/1‑232 (MQ=255) ggCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCAATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGCAACCAGTTGCTGTTGCACTgc > 2:583732/1‑238 (MQ=255) ggCCCATACCCATAAGACCGCCACCACAGCAGCCGCCGTAGCCCATGCCCATTCCAGCTCCACGCGGTATACCCGCTTCAGCCAACGCGATATCTCGTTTCACCCGCAACTCATCTAACGCCTGACGCACATTCTCCAACACTTATGCGAACGCCTTAAGTATGTTGCTACCCGACGGCTTCCCGGCTAACTGGGCACTGACTTCATAACGCTTCGTCAcaaataccccttaccacgc > 1:616498/1‑220 (MQ=255) gCCCATCCCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTgcg < 2:1109617/238‑1 (MQ=255) tacccataTGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCtt > 2:312687/1‑239 (MQ=255) | GCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAA‑CTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGATTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATACCCGCTTCAGCCATCGCGATATCTCGTTTCACCCGTAACTCATCTAACGACTGACGCAAATTCTCCATCTCTTTGGCGACCGCGTTAATTTTGCTGCTATCCGGTGGGTTCGCGGCTAACAGGGCATTGTATTCATAACGCTTCGTCACCAGTTGCTGTTGCAGTGCGCTGCTT > NC_000913/4201046‑4201514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |