| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 433,649 | T→G | 39.7% | G65G (GGT→GGG) | ribD → | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 433,649 | 0 | T | G | 39.7% | 26.1 / 11.2 | 53 | G65G (GGT→GGG) | ribD | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5‑amino‑6‑(5‑phosphoribosylamino) uracil reductase |
| Reads supporting (aligned to +/- strand): ref base T (10/20); new base G (16/6); total (27/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.07e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.58e-01 | |||||||||||
TTTGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGC > NC_000913/433419‑433883 | tttGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGCCAAA‑GAGGCGAccc > 2:193026/1‑237 (MQ=255) ttggcagaggtcccggccgcTTGGGGGACAAGCCCGTGGAGGGCGTGTATTAAGGGGCGGGGGACTAAAAGTTGGCGCAAGGGGTCCGTTTTCCCACGCCTCCCACCCCGAAGGGCGGGTGCGTAATTGTAAAAGA‑GGCAAAATTTGTGGGTAAGGGTTCCCACAAAGTGGGGGGTAAACCACAGGCCGAAGTACACGC‑GTGGCGTATGGG‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑Gcc < 1:1264585/222‑1 (MQ=255) cgcgcgCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTTTGGC‑GGGGGGGAAAACCAAA‑AGGGGGACC‑CCCCAT‑GTccaacccg > 2:882922/1‑232 (MQ=255) ccTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGGGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGCCCAA‑AGGGCGACC‑CCCCAT‑GTCACCCTCGAAccc > 2:67511/1‑238 (MQ=255) gaggaCTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGGCAAA‑GGGGCGACc‑ccccactccaacatccaaccccgta > 2:1305509/1‑216 (MQ=255) cTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGCCAAA‑GGTGCGACC‑GCCCCT‑GTCAACCTCGAACCCTCTAGCcatc > 2:41358/1‑239 (MQ=255) gatgCCGTGCGGGAGTAGTATGACATGGCGCGGGCTCAAAAGGGTGCCCACGGTGTACTTTGTACCCCCCATCCAACCACGAAGGTGGGTGGCTTCATTGTAAAAGAGGGCAAAT‑TTGCCGGTGAAGGTTCCCACCAACGTGCGGGTGAACCACATCCCGAAGTCCACCC‑TTTGCGTAGGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCcatca < 1:41358/236‑1 (MQ=255) aGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGCCCAA‑AGGGCGACC‑GCCCAT‑GTCACACTCCAACCCCGTAGCCATCATg > 2:214080/1‑239 (MQ=255) gTGCAGGACGAGTTTTACAGGGCGGGGGCGATAAAGCGGGCGCAACGAGGACGTTTTCCCACGCATCCCACCCCGAATGTCGGGTGCTTCATTGTAAAAGATGGCGAAA‑TTGTCGGTGAAGGTTCCCACCAACGTGCGGGTGACCCACATGCCGAAGTACACGC‑GTTGCGTAGGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCg < 2:1177589/239‑1 (MQ=255) tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑AGGGCGACC‑GCCTAT‑GTCACACTCGAACCCCGTAGCCCCCATcgtcgt > 2:1284265/1‑239 (MQ=255) tGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGCCAAA‑AGGGCGACC‑GCCCATGGTCAC‑CTCGCAACCCGTAGGCCACATGGTCGt > 2:1199913/1‑239 (MQ=255) gTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCCAT‑GTCACACTCGAACCCTGTAGCCATCATGGGCGTACGCCACCGt > 2:190422/1‑239 (MQ=255) gTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAACCAAA‑GGGGGGGCC‑CCCTCT‑TTCACACCCGCACCCCGGTGCCACCCTGGGCGTAcccccc > 2:576169/1‑234 (MQ=255) tATCACATGGCGCGGGCGCTAAAGCTGGCGCAAGGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCCCCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTca < 2:599955/199‑1 (MQ=255) cgtgggcggggCGCTAAAGGTGGCGCAACGAGGACTTTTTCCCGCGCATCCCAACCCGAATGGCGGGTGCGTAATTGTCAAAGAGGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCtgtg < 2:863996/231‑1 (MQ=255) ggCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGCCAAA‑GGGGCGACC‑GCCTTT‑TTCACACTCGAACCCCGTAGCCACCATGGGCTTACGCCACCCGCCTGTGAc > 2:924888/1‑238 (MQ=255) cgcgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGCCAAA‑GGGGCGAAC‑GCCTAT‑GTCACACTCGAACCCTTTAGCCAACATGGGCGTACCGCACCGGGcctgtgcgc > 2:726619/1‑230 (MQ=255) cgGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGGGCGACC‑GCCCCT‑GTCCCACTCGAACCCTGTAGCACTCATGGTCGTACGCcccccgtctcttttaccc > 2:761881/1‑224 (MQ=255) gcgcAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGGGAAAAAGCCAAA‑GGTGCGAAC‑GCCCAG‑TTACCACCCCAACCCCGTAGCCATCAACGCCCTACGCCACCGTGCTGTGGCGCACCCATACCCGCCGGCgc > 2:775452/1‑238 (MQ=255) cGAGGGCTTTTTCCCCCGCACCCCAACCCGAATGGGGGGGGCGTCATTGAAAAAGATGGCGAAA‑TTGGCGGTGAAGGTTACCCCCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTAGGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAgcgcg < 2:253464/239‑1 (MQ=255) tttttACCACGCCTCCCAACCCGAATGTGGGGTGCGTCATTGTCAAAGATGGCGAAA‑TGGTCGGTAAAGGTTACCCCCAACGTGCGGGTGAACCACATGCCGAAGTACACGG‑GTTGCGTAGGGC‑GGGTAAAAAAGCCAAA‑GGGGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGt < 2:1286785/237‑1 (MQ=255) cGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGGGGCACC‑GCCTAT‑GGCACACTctga > 2:904652/1‑155 (MQ=255) cATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGGGCGACC‑GCCCAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCCCTGGCGTAGCGCGCGTGGGTG‑CCTCGAGGCa > 2:868874/1‑239 (MQ=255) aTGGCGGGTGCGTCATTGTCAAAGGTGGCGAAA‑TTGTCGGTAAAGGTTACCACCAACGTGGGGGTGAACCACATGCCGAAGTACCCGC‑GTTGCGTATGGC‑GGGTAAAAAAGCAAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCg < 2:449975/239‑1 (MQ=255) ggTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCCCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGt > 2:1154930/1‑238 (MQ=255) cGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGCGGGGGGAAAAACCCAAA‑GG‑GCGGCC‑CCCCCT‑GTGCCCCTCGAAACCCGTAGCCATCATGGTCGTACGCCCCCCCGCTGTGGCGCCCCCCACCCCGCCGGCCTAGCGCCCGGGGGTG‑CCCCGCTGCCAAAACCCAACCCACAgggggggg > 1:449975/1‑233 (MQ=255) cATGGTAAAAGGTGGCAAAT‑TTGCAGGTGACGGTTACCCCAAACGTGGGGGTGAACCCCAGGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGc < 2:155321/239‑1 (MQ=255) tgtcaaaaGATGGCGAAA‑TTGTGGGGTAAGGTTACCCCCAACGGGGGGGTAAACCACAGGCCGAAGTACACGC‑GTGGCGTATGGG‑GGGTAAAAAAGCAAAA‑GGTGGGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGt < 2:386828/234‑1 (MQ=255) gggCAAAA‑TTGGCGGTGAAGGTTACCCCAAGCGTGGGGGTAAACCCAATGCCGAAGT‑CCCGCGGTTGCGTAGGGC‑GGGTTAAAAAGCAAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTa < 2:400068/236‑1 (MQ=255) cgattttttCGGTAGAGGTTCCCACATACGTGCGGGTAAACCACAGGCCGAGGTACCCGC‑TTGGGGTAGGGG‑GGTAGAAAAGCCCAAG‑GGTCGGACC‑GCCTAT‑GTCACCCTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGt < 1:214080/230‑1 (MQ=255) tttggtgggTGATGGTTCCCACCCGCGGGCGTGCAAACCAGATGCCGACGTACCCGT‑GTTGGGGTTGGT‑GGGTAAAAGACCCAAG‑GGTGCGACC‑GCCTAT‑GTCCCCCTCGAACCCTGTTGCCATCATGGTCGTACGCCCCCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTg < 1:332363/231‑1 (MQ=255) accaccAACGTGCGGGTGAACCACATGCCGAGGTACACGC‑GTTGCGTATGGC‑GGGTGGCAAAGCCAAA‑AGGGCGACC‑GCCCAT‑GTCACCCACGAACCCCGGAACCATCATGGTGGTACGCCCCCGCGCCCTTACGCACTCCTCTCCCCAGGCGGAGCGACCCAGGTTGCCCCCGAGACAAG‑TCCTAACCCCCAGGGCGCCTGGCGGGGGCTCTAccctactccaaaagccggggttgcg > 1:277060/1‑216 (MQ=255) aaCGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTTTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACCCATCGCCGCTGGCGTAGCGCGCGGGGTTG‑CCTCGGTGCAAGATCCTAACCCCCCGGTCGCCGGGCGTGGACCTTTCCGGCTGCCACAGGCTGGCA‑TTGACGTCAg > 2:947268/1‑238 (MQ=255) cgggCGGGTGACCCATGTGCCGAAGTCCCCGC‑GTTGCGTATGGC‑GGTGAAAAAAGCAAAG‑GGTGCGACC‑GCCTAT‑GTCACACGCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCa < 2:1251738/236‑1 (MQ=255) cgggCGGGTAAACCCCATGCCGAAGTCCCCGC‑GTGGCGTATGGC‑GGGTGAAAAAGCCAAG‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCa < 2:34168/236‑1 (MQ=255) tGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGGGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCCCCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGGGCGGGCTTTTCCGCCTGCAACAGGCTGGCA‑TTGACGCCGGCCCCg > 2:369194/1‑239 (MQ=255) gggggAGAACCCCATGCCGAATGAC‑CGT‑GTTGGGGTGGGG‑GGGGGAAAAAACCAAAGGGTGGGGCC‑GCCTTT‑GGCACACTCGAACCCTGTGGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACg < 1:486136/236‑1 (MQ=255) cGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAACCAAA‑GGGGCGACC‑GCCCAT‑GTCACACTCGAACCCCGTAACCATCCTTGTCCTACGCCACCCGGCTTTGAGGCACGCACTGCCGCCGGCGCATCGCCCCGGGGTG‑GCTCGTTGGAGAACACCAACCCGCCGGCGCCTGGGCCGGGCCTTTACCGGCTGAAAACGGCTGGccatgcaagcagacacgcc > 1:14619/1‑221 (MQ=255) gggtaaacccattGCCAAAGTACACGG‑GTTGGTTAGGGG‑GGGTAAAAAACCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGc < 2:250050/226‑1 (MQ=255) cccccggcccggatgtcccggtgtGCATAGGGG‑GGGTG‑AAACGACAAA‑GGGGCGGCCTCCCTAT‑GGCCCACCCGAACCCTGTAGCCATCGTGGACGTCCGCCACCGGGCTGTGACGCTCGTTTGGCCGCTGTCGAAGCGCGCGTGGTTG‑CCTCGATGCAAGATTCTATCCCGCAGGTCGCTGGGCGTGGACTGTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCtgatg < 1:1279906/215‑1 (MQ=255) gcagaagctcccgttggCGTTTGGG‑GGGAGAAAACCCCAAAGGGGGCGCCC‑GCTTAG‑TTCCCCCTCGAACCCTGTGGCCACCATGGCCGTACGCCCCCGGGCGGTGACGCACTAATCGCCGCGGGCGTAGCGGGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAg < 1:880179/220‑1 (MQ=255) aaGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCCGGTCGCTGGGCGGGGACTTTACCGTCTGCCACAGGCTGGCA‑TTGACGTCAGCCCCGGCCCGATGGTGAGGGAAGcc > 2:915124/1‑239 (MQ=255) attccccgc‑gTTGGGTAGGGC‑GGGTGAAAAACCCAAG‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCg < 2:1295641/233‑1 (MQ=255) tactgcggttggtgtgggC‑GGG‑GAAAAAGCCAAAGGGGGCACCC‑GCCTTT‑GTCCCACTCGAACCCCGTAGCCATCAGGGGCGGACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTCGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAg < 1:576169/223‑1 (MQ=255) acccgggTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGCCC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAg < 2:277060/232‑1 (MQ=255) ttGCGTATGGC‑GGGTGGAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGGACCCTGTAGCCATCATGGTCGGACGCCCCCGGGCTGTGACGCACTCCTCGCCGCTGGCGGAGCGCGCCTGGGTG‑CCTCGATGCAAGATCCTAACCCGCAGGGCGCTGGGCGTGGACTTTACCGTCCGCAACAGGCCGGCA‑TTTGCGTCCGCCACCGCCTGATGTTAGGGGAAACCGGGCAATTGaa > 1:229860/1‑239 (MQ=255) gCGTATGGG‑GGGGAAAAACGCAAAG‑GGGGCGACC‑GCCTAT‑GTCACCCTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATa < 2:14619/239‑1 (MQ=255) cGTAGGGC‑GGGTGAAAAAGCAAAG‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGt < 2:58994/69‑1 (MQ=255) gtGGG‑GGGTGAAAAGCCAAAA‑GGTGTGCCC‑GCCTAT‑GGCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAg < 2:404270/237‑1 (MQ=255) gggC‑GGGAAAAAAAGCCAAG‑GGGGCGCCC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGc < 2:687243/238‑1 (MQ=255) ggggAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCCTGCTTTGCAGCCCTCATCGCCCCTGGCGTAGCGCGCCGGGTGG‑CCTCGATGCAAGATCCTAACCCGCAGGGCGCCGGGCGTGGCCTTTACCGTCTGCAACAGCCTGGCACTTCGCG‑CCGCCCCGGCCCCAAGATGAGTGAAACCGCGAAAATGaaaaaaagggtttc > 1:687243/4‑231 (MQ=255) a‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGCCTTTCTCAAGCGGATgggc > 2:534743/1‑238 (MQ=255) a‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGGGAGGCCGACCAATTGAATAAAGGCTTTCTCAAGCGGCTgcgc > 2:204363/1‑238 (MQ=255) | TTTGGCGAAGAGATCGCGCGCCTGGAGGACTAAGCCGTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAA‑TTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGC‑GTTGCGTATGGC‑GGGTGAAAAAGCCAAA‑GGTGCGACC‑GCCTAT‑GTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTG‑CCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCA‑TTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGC > NC_000913/433419‑433883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |