| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 437,444 | A→C | 18.8% | V231G (GTG→GGG) | yajO ← | 2‑carboxybenzaldehyde reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 437,444 | 0 | A | C | 18.8% | 139.0 / 2.9 | 71 | V231G (GTG→GGG) | yajO | 2‑carboxybenzaldehyde reductase |
| Reads supporting (aligned to +/- strand): ref base A (36/17); new base C (3/14); total (39/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.92e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGAAGCGTGCATTGATGACGCGCCGATATAACG > NC_000913/437207‑437682 | tCGGCAATCTTTTCCGGCTTCAAAGTGATATCCACCGCATTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGacac < 2:1186116/239‑1 (MQ=255) cggcaagtgtttccgatgtCAAAGTGATAGCCCCCCCGTGCAATGGCCCACTAAGCTGTTCTTCGAGCAGAGTTCCGGAAAGC‑GGTGCGGCAATGCCCGGTTTACTCAACGACCAGGCCAGCGCAAGTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCAGCAGacac < 1:233936/220‑1 (MQ=255) cGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCCACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCCCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGacac > 2:823666/1‑238 (MQ=255) ttCCGGGTTCCAATTTGTATCCCCCGGGTTAGATGGCCCAACGAGGTGTTCCTCGCGGCAAGTGCCGATAATCGGGTGC‑GCAATGCCCGGTTTAATCCACAACCAGGCCAGCGCAACTTGTGCCCGTGTCGCCCCCAGTTCTTCACTGCCGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCgg < 1:1287842/239‑1 (MQ=255) ttCCGGCTTCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑CTCGCTTTCTTTTTAGAGCTTTTTCCCCCCCTCATCAGccaccaacccagcg > 2:233936/1‑230 (MQ=255) ttCCCGGTTCAAAGGGTATTCCCCCGGGTTCCATAGGTCATTCAGCTGTTCCTCGGGCGAAGTTCCGAAAATG‑CGTGCGGCAATGCCCGTTTTACTCAACACCCAGGCCAGCGCCACTTTTGCTCGTGTCGCCCCCAGTTCTTCCCTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCAGCAGACACCAGTCGTGCgg < 1:583542/239‑1 (MQ=255) tCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCCGACCCCAGTCGTGCGGTAGtttt > 2:1287842/1‑237 (MQ=255) aaaGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTtttc > 2:925734/1‑238 (MQ=255) tatCCCCCGCGTTCAATAGCCCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGa < 2:1100670/239‑1 (MQ=255) aCCGCGTTCAATCGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGt < 2:243623/239‑1 (MQ=255) cgcgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGCGGTTTTTCCCACCCTCTTCAGACACCAATCGTTCGGCATTTTCTCCACACGGAccggcaa > 1:301597/1‑233 (MQ=255) cgcgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTTCCCCCACGGACCCTTCa > 2:1191500/1‑239 (MQ=255) cgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGGGATTTTTCCCCACCTCATCAGACCCCAGTCGTGCGGTCGTTTCTCCCCACGGACGGCTCAg > 2:1189357/1‑238 (MQ=255) cgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGa < 2:732837/239‑1 (MQ=255) cgTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTAACTGACGCCTGTTAACCGCTCTGCGATCTCCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGGTTTTTCCCCACCTCATCAGACACCAGACGTGAGGAGATTTTTCCCCACGGAAGCGTCaaa > 1:243623/1‑237 (MQ=255) attgCTCATCAAGCTGTTCTTCGCGCTAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGccc < 2:794322/236‑1 (MQ=255) cTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCtt > 2:36081/1‑238 (MQ=255) atcaAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCCCTCCATCCGGCACAAGTCGTTCGGGAGTTTCTCCCCACGGGCGCGTcggcaccacccttccca > 2:1141609/1‑223 (MQ=255) caAGCTGTTCTTCGCGCGAAGATCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGCTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGCCATTTTC‑CTCGCTTTCTTTCTAGAGATTTTTCCCCACCTCATCAGGCACCAGTCGCGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCaac > 1:274792/1‑237 (MQ=255) tGTTCTTCGGGTGAAGTTCCGATAAGC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCggg < 2:96138/237‑1 (MQ=255) tcttcGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGTCACCAGTCGTGCGGTAGTTGCTCCCCACGGACGCGCCAGACGGCCCCTTTCCAGCGGGCTCCa > 2:270782/1‑239 (MQ=255) cttcggccaaatttCCGAATAGC‑GGTGCGGCAATGCCCTGTTTACTCAACACCCAGGCCAGGGAACCTGGTGCTCGTGTCGCCCCCAGTTCTTCACGTACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCAt < 1:624687/227‑1 (MQ=255) aaTC‑GGGGCGGCAAGGCCCGGTTTCCTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCcct < 2:1258792/239‑1 (MQ=255) cccgggggggCAAGGCCCGGTTTACACACAACCCGGGCCCGGGCAACTTGGTCTCGTGTACCCCCCGGTTTTTCCCTGCCGCCTGTTAACCGCTCTGCGACCTGCGCGTCATTTTC‑ACCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGACCCCAGTCGGGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCcctc < 1:1239381/231‑1 (MQ=255) c‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCCGTCGTGCGGCAGTTTCTCCCCACGGACGCGTCCGACGGCCCCTTTCCACCGGGCTCCATGGAATTACCGCcccccccccc > 1:853887/1‑238 (MQ=255) tGCGGCAATGCCCGGTTTACTCAACAACCCGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCACACGGGCTCCATGGAATTACCGCACCGCCTCCCTGAt > 2:419903/1‑239 (MQ=255) ggCATTGCCCGGTTTACTCAACAACAGGGCCCGCGCAACTTGTGGTGGGGTCGCCCCCATTTCTTCACGGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGACCCCAGTCGTGCGGTAGTTTCTCCCCCCGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATaa < 2:713312/238‑1 (MQ=255) ggCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTCCCCGCTCTGCGCTCTGCGCGTCCTTTTC‑CTCGCTTTCTTTCTCGAGATTTTTCCCCACCTCATCCGCCCCCAGTCGTGCGGTCGTTTCTCCCCCCGGCCGCGTCAGCCGCCCCCTTTCCAGCGGGCCCACTGAAATAACCGCAACGCCCCCCTAATAac > 1:73690/1‑239 (MQ=255) cAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCG‑CCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGCCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGCAGTTTCTCCCCCCGGACGCGTCAGACGGCCCCTTGCACGCCGGCCCCATGTAATTACCGCCACGCCCCCCCGAAAAaaca > 1:1319969/1‑239 (MQ=255) acttccggtttttCTCAACAACCGGGCCCGCGAATCTTGGCCCTGGGGCGCCCCGAGTTCTGTACTGCCGCTTTTTAACCTCTCGGCGTGCGGCGCTGAATTTTC‑AGCGTTTTCTTTAGGAAGATTTTTCCCCCCCGTCGCCGCCCCCGGTCGTGCGGTAGTTTCTCCCCCCGGACGCGTCAGACGGCCCTTGGCCCGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAacac < 1:1189357/229‑1 (MQ=255) cTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCCGATAACACAGTGGAAGCAtct > 2:336501/1‑238 (MQ=255) tCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCAtctc > 2:115060/1‑238 (MQ=255) cacaccCCGGCCCGCTCAACTCGGTCTCGTGTCCCCCCCATTTTTTCACTGACGCCTGTTACCCGCTCCTCGATCTGCGGTTCATTTTC‑ATCTCTTTCTTTATAGGAATTTTTCCCCCCCTCCTCAGACACCAGTCGGGCGGGAGTTTCTCCCCACGGACCCGTCAGCTCGCCCCTTGCCGGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTcgcg < 1:493216/238‑1 (MQ=255) ccAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGCTAACACAGTGGTAGCATCCCGCGccct > 2:297485/1‑238 (MQ=255) gcgcAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGGGGTAGCATCTCGCGCTCTTCTTCACGa > 2:731583/1‑239 (MQ=255) cgcAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACggt > 2:768544/1‑237 (MQ=255) acttttttcttgtgtCCCCCCCTTTTCTTCCCTGGCGCTGGTTAACCGCTCTGCAGTCTGCGCTTCATTTTC‑ATCGCTTTTTTTATAGGTATTTTTCCCCCCCTCATCAGCCCCCGGTCGTGCGGTAGTTTCTCCCCCCGGACGCGTCAGACGGCCCCTTGCAAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATaaa < 1:115060/228‑1 (MQ=255) cTTGGGCTCGTGTCCCCCCCAGTTTTTCACTGACCCCTGTTAACCGCTCTGCGTTCCGCGCGTCATTTTC‑ACCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGACCCCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCcct < 1:1069962/192‑1 (MQ=255) cGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCGGATTGTa > 2:265281/1‑239 (MQ=255) cGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCCCGCTCTTCTTCACGATAAATCAGATTGTa > 2:1287916/1‑239 (MQ=255) tgttcccccctATTTTTTCTCTGACCCTTTTAAACCGCTTTGCGATCTGCGCGTCATTTTC‑ATCGTTTTTTTTATAGAGTTTTTTCCCCCCCTCATCAGACCCCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAg < 1:925734/233‑1 (MQ=255) gtgtCGCCCCCAGTTCTTCCCTTACGCCTTTTAACCGCTTTGGGATCCGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAg < 2:440422/239‑1 (MQ=255) gtgtCCCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAg < 2:957993/239‑1 (MQ=255) tgtCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAaca > 2:1069962/1‑192 (MQ=255) tgtCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAACTCAACTTGTa > 2:336703/1‑237 (MQ=255) tgtCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGCGGTAGCATCTCGCGCTCTTCTTCACGATAAAACAAATTGAAgg > 1:957993/1‑238 (MQ=255) tgtCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTACTGATAAAACAGTGGTAGCATCTCTCCCCCTTCTTCACGCACAATCAAATTGTaat > 1:795538/1‑237 (MQ=255) gCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGCTAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGAt > 2:800825/1‑238 (MQ=255) gCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCAAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGAt > 2:878726/1‑238 (MQ=255) gcttttttccttgtccctttttcaCCTCTCTGGGCTCTTGGCGTCATTTGCGCTCG‑TTTCTTTAAGGAAATTTTCCCCCCTCCCACCAGACGCGCGTCGTGCGGAAGTTTCCCCCCACGGACGCGTCAGTCGGCCCCTGGCCACGGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAAGCAGATTGTAGTGATCCTGCa < 1:876118/216‑1 (MQ=255) cattttttcACTGACGCCTTTTACCCGCTCGGCGATCTGCGCGTAATTTCC‑ATCGCTTTCTTTATAGAGATTTCCCCCCACCTCACCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCa < 2:73690/233‑1 (MQ=255) cAGTTCTTCCCTGACGCCTGTTACCCGCTTTGCGTTCTGCGCGTCATTTTC‑ACCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGACACCAGTCGTGCGGTGGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCa < 2:573045/239‑1 (MQ=255) ttttttcTCTGCCCCCTTTTACCCGCTCTGCGATCTGCCCGTCATTTTC‑CGTGCTTTCTTTATACAGATTTTCCCCCCCCGCAGCAGACCCCAGTCGTGCGGTAGTTTCCCCCCACGGACGCGTCACACGGACCCTTGCCAGCGGGCTCCATGGAATTCCCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATa < 1:36081/235‑1 (MQ=255) gTTCTTCACTGCCTCCTGTTAACCGTTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCCCCTCATCAGCCCCCAGTCGTGCGGTAGTTTCCCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATa < 2:1206007/239‑1 (MQ=255) cACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCCTGGACTTACCGCCACCCCCTCCTGATAACCCAGTGGAACCATCTCGCCCTCTTCTTCCCGACAAAACAGAATGAAGGGATCCTGCCAACTTACa > 1:631068/1‑239 (MQ=255) aCGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCTCCTTGCCAGCGGGCTCCCTGGAATTCCCCCCACGCCCTCCTGTTAACACAGTGGTAGCATTCCGCGCCCTTCTTCCCGATAAACCAGATTGTAGTGATCCTGCACACTGACAAACt > 1:939430/1‑238 (MQ=255) aCGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGCCAAACt > 2:1198443/1‑238 (MQ=255) cTGTTACCCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCGCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTg < 2:1248958/214‑1 (MQ=255) ttAACCGCTCTGGGATCTGCGCGCTATTTTC‑ATCGCTTTCTTTATAGGAATTTTTCCCCACCTCATCAGACCCCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAg < 2:301597/239‑1 (MQ=255) cGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCCCGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTg < 2:853887/239‑1 (MQ=255) ctctGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCTAACTGGAAAACTGCGCCCAGCCGTGCt > 2:1096411/1‑239 (MQ=255) ctctGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCCCTTCTTCACGATAAATCCGATTGTAGTGATCCTGCATACTGCCAAACTGCGCCCAccccg > 1:99010/1‑234 (MQ=255) tcggcgcCTTATTTTC‑ATCGCTTTCTTTAAAGAGATTTTTCCCCACCTCATCAGACCCCAGTCGTGCGGTAGTTTCCCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTg < 2:776035/235‑1 (MQ=255) ttggccgTCCTTTTC‑CTCCGTTTCTTTAAAGAGATTTTCCCCCCCCCCAACACACCACGGTCGTGCGGTAGTTTCCCCCCACGAGCGCCTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGa < 1:1287916/234‑1 (MQ=255) ttgccgcttaTTTTC‑TTCGTTTTTTTTATGGAATTTTTCCCCCCCCCCATCAGCCCCCAGTCGTGCGGTTGTTTCCCCCCCGGGACGCGTCAGGCGGCCCCGTGCCAGCGGGCTCAATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCGGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGa < 1:265281/230‑1 (MQ=255) gcgcGTCATTTTC‑ATCGCTTTCTTTTTAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCa > 2:266011/1‑201 (MQ=255) cgcgTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGt > 2:626310/1‑238 (MQ=255) cATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGt > 2:1118420/1‑239 (MQ=255) taaaggaaTTTTCCCCCCCCCCATCAAACCCCAGTCGGGCGGTAGTTCCCCCCCCCGGCCGCGTCAGACGGCCCCTTGCCAGCGGGCTCAATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGaa < 2:795538/232‑1 (MQ=255) gtgtttttaagtgccaaCCTCATCAGGCCCCAGTCGGGCGGTATTTTCTCCCAACGGACCTGTCAGGCGGCCCCTTGCCAGGGGGTTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGaa < 2:1011723/222‑1 (MQ=255) tttttCCACAGCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCTCACGGACGCGTCAGACGGCCCATTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGCTAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCTTGCATACTGACAAACTGACACCAACCGAGATGTTTTTGGAGCTCCAGTGCCGGAGCAAACTGCGAAACggacat > 1:1256575/1‑234 (MQ=255) cACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGCTAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGGGCTTGTTTTGGAGTTCCAATCCCTGAGCAACCTGCCAAGCGGCCATTGGTGAcc > 1:1160711/1‑238 (MQ=255) aCCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGGCCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACGGCGAAGGGGCCATTGTTGAcgc > 1:9555/1‑239 (MQ=255) atcaGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGAAGCGTGCATTGATGACGCGCCGa > 2:476100/1‑239 (MQ=255) tcaGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGTTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTgcg < 2:382252/169‑1 (MQ=255) acCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATACTGCATACTGACAAACTGCGCCCAGCCGCGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAAATGGCCACCGGGCATtgactgtttcttatacaaa > 1:1011723/1‑221 (MQ=255) acCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGGGGTAGCATCTCGCGCTCTTCTTCACGCTAAATCAGATTGTAGTGATCCTGCATACTGCCAAACTGCGCCCAGCCGTGCGGTTTTTGGAGTTCCAGTGCCCGGGCAAACTGCGAAGCGTGCATTTAGGACGCCCCGagaaaaac > 1:625258/1‑232 (MQ=255) acCAGACGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCCCGCTCCTCTTCACGATACATCAGATTGTAGTGATCTCGCATACTGGCAAACTGCGCCCAGCCGTCCTGTTTTTGGTGTTCCAGCTCCTGGACAAACACCTAAGCGTGcctgtgttaaggcccgagataacg > 1:329078/1‑216 (MQ=255) | TCGGCAATCTGTTCCGGCTTCAAAGTGATATCCACCGCGTTCAATAGCTCATCAAGCTGTTCTTCGCGCGAAGTTCCGATAATC‑GGTGCGGCAATGCCCGGTTTACTCAACAACCAGGCCAGCGCAACTTGTGCTCGTGTCGCCCCCAGTTCTTCACTGACGCCTGTTAACCGCTCTGCGATCTGCGCGTCATTTTC‑ATCGCTTTCTTTATAGAGATTTTTCCCCACCTCATCAGACACCAGTCGTGCGGTAGTTTCTCCCCACGGACGCGTCAGACGGCCCCTTGCCAGCGGGCTCCATGGAATTACCGCCACGCCCTCCTGATAACACAGTGGTAGCATCTCGCGCTCTTCTTCACGATAAATCAGATTGTAGTGATCCTGCATACTGACAAACTGCGCCCAGCCGTGCTGTTTTTGGAGTTCCAGTGCCTGAGCAAACTGCGAAGCGTGCATTGATGACGCGCCGATATAACG > NC_000913/437207‑437682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |