| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,464,860 | A→C | 10.2% | V441G (GTG→GGG) | treB ← | trehalose‑specific PTS enzyme: IIB and IIC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,464,860 | 0 | A | C | 10.2% | 308.9 / 2.5 | 134 | V441G (GTG→GGG) | treB | trehalose‑specific PTS enzyme: IIB and IIC component |
| Reads supporting (aligned to +/- strand): ref base A (73/33); new base C (2/22); total (75/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.13e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 134 total aligned reads displayed.
TACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCGGCAGGCACGGAGATCTCGCGTTCATTGTGCTTGCGG > NC_000913/4464626‑4465093 | tACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAGACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCt < 2:246643/238‑1 (MQ=255) cTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑ga > 2:395134/1‑238 (MQ=255) accctgggtgTCCTTAAATCTCTTTGGATAAATCGGGAAGATAACGCGGTTTGGCGAGCAGGGGGGAAGGTGAGTCAGTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCTGCCCG‑AAGAAAATTAAACAATGTCCAGCTTGCCCAGGCGGTATTTCCGCTG‑ATAG‑AGAAACGAGGGGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAg < 1:571854/233‑1 (MQ=255) cGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAACTTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCCG‑TTAG‑ATAAACGGGGGGAGTAAAATCGGGCTGTGGTTGGCGTAAGCAATAGCCAGCCAAAA‑AACCTGCCA‑GCAGATc > 1:101227/1‑239 (MQ=255) ggtgTCCTGAAAACTCTTTGGATAAATCTGGTAGCTAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGACTGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAAGGTCCAGCGTGCCCAGGCGGTCTTTCCGCGG‑ATAG‑GTAAACGAGGTGAGTAAAAACGGGATAGTTATGGGGACAACCATTGCCGGGGGAAA‑AACCCGcaccagaccgggg > 1:1153322/1‑227 (MQ=255) ggtgTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGt < 2:624332/239‑1 (MQ=255) ggtgTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCCC‑GGt > 2:283632/1‑239 (MQ=255) gtCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTTCCA‑GTAGCTC‑GGTTGa > 2:443319/1‑239 (MQ=255) ccggAAAACTTTTTGGATAACACTGGTAGAAAACGCCGTTTTGCCACCAGTTGGGAAGATGAGGCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAAt < 2:1153322/236‑1 (MQ=255) ccTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTCAAATCGGGATGATGATGGCGATAGCCATTGCAAGCGCAAA‑CCCCTGCCA‑ATAGCCC‑GGTTGAAt > 2:1287303/1‑239 (MQ=255) tctTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑GAAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGTCGCTCGCCCTTGCCAGCGCAAA‑CACCTGCCA‑GGAGCTC‑GGTTGAATCga‑gagcaa > 1:229690/1‑236 (MQ=255) tctTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTGGAATCGA‑GAGaa > 2:472106/1‑238 (MQ=255) aaaTTTTGTAGAGAACGCTGTTTTGCCACCGGGGGGGAAGAGGGGTCATTACGTTATTCCTGCGAATGGGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAg < 1:283632/239‑1 (MQ=255) aaTCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGGCATTACGTTATTCCTGCGAATGCGAGGGGGGGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGGGCCCAGGCGGGATTTCCGCGG‑ATAG‑AGAAACGAGGTGAGTACAATCGGGATGGTGAGGGGGACAGCCATGGCCGCCGCAAA‑CACCTGCCA‑GAAGCCC‑GAGGGAATCGG‑AAGAATTccaagacg > 1:730300/1‑232 (MQ=255) atcggttAGATAACGCCGTTTGGCCACCAGGGGGGAAGATGAGTCATTACGTTAGTCCGGCGAATGCGAGGGGGCGCACTGGCGCCCCG‑AGGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGgc < 1:152070/233‑1 (MQ=255) gTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGG‑GAGAATTCCCGGCAGgccccc > 2:1656/1‑238 (MQ=255) gTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GGGAATTCCCGGCAGGCCGCCt > 2:493126/1‑239 (MQ=255) gTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCCC‑GGTTGAACCGA‑GAGAATTCCCGGAAGgccgcc > 2:750181/1‑238 (MQ=255) gTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGCGAGAAACATCCGGATGTAGATGGCGATATCCATTGCCAGCGCAAA‑CACCAGCCG‑TCGGCTC‑GGTTGAA‑CGAGGAGAATTCCCGCCAGcccgcac > 1:658300/1‑237 (MQ=255) aaCGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGG‑GAGAATTCCCGGCAGGCCCCCTACGCCg > 2:684234/1‑239 (MQ=255) aaCGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCg > 2:1210201/1‑239 (MQ=255) aaCGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCGGCCA‑GTAGCTC‑GGGTGAAACAG‑GGGAATTCCGGGCAGGCCGCCCAGGCCg > 1:1054203/1‑239 (MQ=255) aaCGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGGATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGAGGATGATGTCGCTAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCCC‑GGTGGAATCGA‑GAGAAATCCCGGGAGGCGGCCCAccccc > 1:934120/1‑238 (MQ=255) aCGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCCC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCGGCCTACGCCg > 2:157436/1‑238 (MQ=255) aGATGATTCATTACGTTATTCCTTGGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAAAAAATTAAACAATGTCCAGCGTGCCACGGGGGTATTTCCGCGG‑ATAG‑ATAAACGAGGTGAGTCAAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CTCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTCCGCCGATGCCATT‑CGCCATAACGCCGTTCa < 1:1066691/239‑1 (MQ=255) tgtgttaTTAGGTTTTTCCGGTGAAGGCGAGGGGGCGGCATTGCGCCCCG‑AAGAAAATAAAACAAGGGCAGGCGTTGCCGGGCGTTAATTCGGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAgg < 1:172037/232‑1 (MQ=255) gAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGCTAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GCTAATTCCCGGCAGGCCGCCTACGCCGCTGACATT‑CGCCATAACGCCCTCCAGGc > 2:380324/1‑238 (MQ=255) gAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGGATTTCCGCTG‑ATAG‑AAAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGAGCAAA‑ACCCACCCG‑CTGACTC‑GCTTGAATCGA‑AGAAATTCCACGCAGGCCGCCCCCGCCGTGGCCATC‑CCCCATaaacccgctaaggag > 1:965066/1‑226 (MQ=255) aGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTCTTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑AACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCCTAACCCCGTTCAGGcc > 2:801066/1‑238 (MQ=255) tCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCa < 2:194744/213‑1 (MQ=255) tttttccctggagatgggggggggCCAAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCGGCGTGCCCGGGGGGTTTTTCCGCTG‑ATAG‑ATAAACGAGGTGATTACAAGCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAAt < 1:553129/220‑1 (MQ=255) aTTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCCAAACGCCGTTCAGGCCGCATAGCAATcc > 2:574139/1‑238 (MQ=255) aTTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATGCCAATcc > 2:921827/1‑238 (MQ=255) aTTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCCC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCCTAACGCCGTTCAGGcgccaaggaaaacc > 2:543127/1‑225 (MQ=255) ttctggaaaTGGGGGGGGGGACAATTGGGCCCCA‑AAGAAAATTAAACAAGGGCCAGCGTGCCCAGGCGGTATTTCCCGTG‑ATAG‑ATAAACGAGGTGAGTACAAGCGGGATGATGCGGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGc < 1:1286056/232‑1 (MQ=255) tcttgagAATGCGGGGGGGGGAAATAGCGCCCCG‑AAGAAAAATAAACAAGGTCCGGCGTGCCGGGGGGGTGTTTCCG‑GG‑AGAGAATAAACATGGTAGGTACAATGGGGATGAGGAGGGCGATTGGCATTGCCAGCGGAAA‑CCCCTGCCA‑GGAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGc < 1:154849/233‑1 (MQ=255) tcgcgagAATGCGAGGGGGCCAAGTGGCTCCCTG‑AAGAAAAATAAACAGTGGCCGGCTGCCCCAGGCGGT‑TTTCCGCGGTATAG‑ATAAACGAGGTTAGCACATTCGGGATTATGAGGGCGATTGCCAGTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATCCCCGGCAGCCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGc < 1:837610/233‑1 (MQ=255) tCCTGGGAATGCGAGGGGGCGCAATGGCGCCCAG‑AAGAAAATTAAACAATGTCCAGCGGGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGc < 2:163110/239‑1 (MQ=255) tCCTGCGAATGCGAGGGGGCGCAATTGCCCACCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGc < 2:11627/239‑1 (MQ=255) tCCTGCGAAGGCGGGGGGGCGCAATTTCGCCCCG‑AAGAAAATGTAACAAGGGCCGGCGTGCCCGGGTGGTATTTCCGGTG‑ATAG‑ATAAACGGGGTGAATACAAGCGGGATGATGGTGGCGATAGCCATTGCCAGCGCAAA‑CGCCTGCCA‑GTAGCCC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGc < 1:178276/239‑1 (MQ=255) gCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCCATGCCATT‑CGCCATAACCCCGTTCAGGCCCCAAACCAAcccccccca > 1:434150/1‑232 (MQ=255) gCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGCGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCCATGCCATT‑CGCCCTAATCCCCTTCAGGCGCAATAGCAATCCTGccag > 2:350630/1‑238 (MQ=255) actggtggggggCGAATTGGCGCCCCT‑AAAAAAATTAAAAAATGTCCAGGGTGCCCAGGGGGTTTTTCCGCTG‑ATAG‑ATAAACGGGGTAAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccagacca < 1:811368/232‑1 (MQ=255) aGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GGAAATTCCCGTCAGGCCGCCTACTCCGCGGCCATT‑CGCCAAAACGCCGTTCGGCCCGCATACCAACCCTCccaaccacaaacca > 1:1087377/1‑228 (MQ=255) cgcAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATACCGCCGTTCAGGCCGCATAGCAATCCTGCCCGACACGAACCAatcat > 2:1193033/1‑238 (MQ=255) tttccccccG‑AAAAAATTTAAACAGTTTCCAGGTTGCCCGGGCGGTTTTTCCCCTG‑ATAG‑ACAAACGGGGTGAGTACACTCGGGCTGATGATGGCGATGGCAATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGca < 1:543127/234‑1 (MQ=255) ttGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATa < 2:337645/205‑1 (MQ=255) ttGCGCCCAG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGca < 2:455960/239‑1 (MQ=255) ttGCGCCCAG‑AAAAAAATTAAACAATGCCCAGGGGGCCCAGGCGGTATTTCCGCTG‑AGAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATGGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGca < 1:901117/239‑1 (MQ=255) ttGCGCCACG‑AAGAAAATTAAACCAGGTCCAGGGTCCCCGGGCGGATTTTCCGCTG‑ATAA‑AATAACGAGGTGAGTACAAGTGGGAGGAGGAGGGCGAAGGCCTTGGCAAGCCGAAA‑CGCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGca < 1:262718/239‑1 (MQ=255) tgtgcccccG‑ATGAAAAGTAAACAATTGCGAGGTGGCCGAGGCGGGCTGTCGGGTG‑AGAG‑TCAAAGGATGAGAGTAGAACCGGAGGGATGATGACGATAGCCGTGGCCAGCGGAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑AATACTGCCCGGCAGGCCGCCCACGCCGATGCCACT‑CGCCATAACGCCGGTCAGGCCGGATAGCAAGCCTGCCAGACCAGAACCAATCATCGCGca < 1:531032/234‑1 (MQ=255) gtggccccaG‑AAAAAAATTTAAAAATTGCCAGGGGGCCCGGGGTGTTTTTCCGCTG‑ATAA‑AAAAAAGGGGAGAGTACAATCGGGAGGGTGAGTGCGATAGCCATTGCCAGCGAAAA‑CACCGGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGca < 1:1656/234‑1 (MQ=255) tGCCCCCCGCAAAAAAATTTAACAAGGTCCCGGTGGCCCGGGGGGTTTTCCCGGTT‑ATAG‑ATAAACGAGGGGAGTACAAGCGGGATGGTTATGGCGATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGca < 1:443319/239‑1 (MQ=255) cG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACg > 2:89076/1‑181 (MQ=255) cG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCCTAGCAATCCTGCCAGACCAGAACCAATCATcgccaccagcaccg > 2:351741/1‑228 (MQ=255) aaTCAAAAAATGTCCCGGGGGCCCGGGGGGTATGTCCCGTG‑ATAG‑TTAAACGGGGGAGGTACCACCGGGAGGTTGTGGGCGAAAGCCCTT‑CCCGCCCAAACCCCCTGACA‑GTAGCTC‑GTGTCAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCg < 1:571786/239‑1 (MQ=255) tAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGG‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCCAAACGCCGTTCAGGCCCACTAGCAATCCTGCCAAACCGCAACCAATCATCGCGCCCACCATCGGGAAGCGata > 2:571786/1‑239 (MQ=255) tAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGGGAGTACAATCGGGATGATGATGGCGCTAGCCATTGCCAGCGCAAA‑CACCTTCCA‑GTAGCTC‑GGTTGAATCCA‑GAGAATTCCCGGCAGGCCGCCTACTCCCATGCCAAT‑CGCCAAAACGCCGTTCAGGCCGCATAGCAAGCCTTCCAAACCCAAACCAATAATCCCGCACAGCATCGGGAAGCCata > 2:571800/1‑239 (MQ=255) tgcccgCGTTCTCAGGTGGTTTTTCCGCTG‑ATAG‑ATAACCGGGGTGAGTACAATCGGGCTGATGATGGCGATAGCCATGGCCAGGCCAAA‑CACCTGCCA‑GTTGTGC‑GTTTGAATCGA‑GAAAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGt < 1:1316210/234‑1 (MQ=255) gTCCAGCGTGCCCAGGGGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTTAGTACAATGGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CCCCGGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGt < 2:965066/239‑1 (MQ=255) ccAGCTGGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGt < 2:88464/237‑1 (MQ=255) tagTGCCCTGGCTGTTTTCCCGGTT‑AAAG‑ATAAAAGAGGGCAGTCCCAGCGGGAGGGAGAGTGCGATTGCGATGGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATg < 1:917010/237‑1 (MQ=255) gtctGCCCAGGGGGTTTTTCCGGTG‑ATAG‑ATAAACGGGGTGATTCCATACGGGTGGATGATGGCGATAGCCATGCCCAGCCAAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATg < 1:73527/236‑1 (MQ=255) ggtggCCCAGGGGGTTTTTCCGATG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATg < 2:500882/235‑1 (MQ=255) gggggCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATg < 2:23738/235‑1 (MQ=255) gCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGAt > 2:1246097/1‑238 (MQ=255) cGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACACTCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGG‑GAGAATTCCCGGCAGACCGCCTACGCCGGTGCCATTGCGCC‑TAAAGCCTTTCAGGCCCCATCGCAAACCACCCACACCCGAAACACTCATACAGCACCCCAATGGGAAGCGAGA‑TTTTAGGTGGacc > 1:1228129/1‑236 (MQ=255) gCCCGGGGGGTATTTCCCGTG‑ATAG‑AAAAACGAGGGGGGTACAATGGGGATGATGAGGGCGATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGt < 2:652091/239‑1 (MQ=255) cccAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTAAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATAATCGCGCACAGCATCGGGAAGCGCTA‑TTTCAGGTTGATGCCGTa > 2:304166/1‑239 (MQ=255) aGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGTTGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGCGAGCACTA‑TTTCAGGTTGCTGCCGGAcct > 2:891800/1‑237 (MQ=255) aTTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCAAAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAgg > 2:176521/1‑238 (MQ=255) cggtG‑ATAG‑ATAAACGAGGGTAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGt < 2:701224/236‑1 (MQ=255) cGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCTCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTa > 2:1121282/1‑224 (MQ=255) cGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAgg > 2:1246385/1‑238 (MQ=255) taAACGGGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGc < 2:187052/239‑1 (MQ=255) taAACGGGGTGAGTAAAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGc < 2:685258/239‑1 (MQ=255) gggttGAGTACAATCGGGGTGTGGCGGGGGATGCCCTTTCCCAGAGCAAA‑CACCTGCCA‑GTAGCTC‑GGTGGAATCGA‑GAGAATTCCCGGCCGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGc < 1:1210201/235‑1 (MQ=255) gAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGCTA‑TTTCAGGTTGATCCCGTACATTCCAGGCCCAGGGACCCCAAACCAggg > 1:192809/1‑238 (MQ=255) ggTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGccagac < 2:133332/152‑1 (MQ=255) ggTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTAACCCCAAGCCAGGCgg > 2:119282/1‑239 (MQ=255) gTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCCTACAAATCCTGCCACACCAGAACCAACCATCGCGCACACCATCGGGCCCGGGTC‑TTTCCGGTTGATGCCCTCCATTGCAAGCCCCGTGACCCCAAGCCCGggggg > 1:1084121/1‑238 (MQ=255) gTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTTCAGGCTCAGTGACCCCAAGCCAGGCggg > 2:431723/1‑238 (MQ=255) atcgggttgtggttgcgacaaGCCATCGCCA‑CGGCAA‑CGCCCGCCAGGTATCTC‑CGTTGAATCAA‑GAGAAGCCCCGGCGGGCCGCCAATGCCGATGCCATT‑CGCTATAACGCCGTTCAGGCCGCAGAGCAATCCTGCCAGACGAGAACCAATCATAGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCggc < 1:921827/219‑1 (MQ=255) tCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCGGTTCAGGCCGCATAGCAATCCTCCCAGCCCAGAACCAATCATCGCGCACAGCATCGGGAACCGATA‑TTTCAGGCTGATGCCGTACATTGCCGGCCCAGTGACCCCacaccacccggggagaggggac > 1:772947/1‑218 (MQ=255) tCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCATTGACCCCAAGCCAGCCGGGGAGAGTggca > 2:1258595/1‑239 (MQ=255) tCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGGGATAGCggca > 2:1253275/1‑239 (MQ=255) tCGGGATGATGAGGGCGATAGCCATTGCCCGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCggca < 2:101227/239‑1 (MQ=255) ggctgatgatgGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑TGTTGAATCGA‑GAGAATTCCCGGCAGCCCGCCTACTCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCCTAGCAACCCTGCCAGACCAGAACCAACACTCGCCCACCACATCTGGAAGCGATA‑TTCACGGTTGATGCCGCACATTACAGGCACATGGACCCAACACCAGACGGAGA‑AGCgggcaaga > 1:1224601/4‑233 (MQ=255) ggATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCACGCACAGCATCGGGAAGCGAAA‑TTTCAGGTTGCTGCCGTACATTCAAGGACCCGTGCCCCCAAGCCAGGCGGAGATAGccggaagg > 1:869575/1‑232 (MQ=255) atgatgatgGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GTTTGAATCGA‑GAGACTTCCCGGCAGGCCCCCTAAGCCGATGCCATT‑CGCCATAAAGCCGCTCAGGCCGCATAGCAATCCAGCCAGACCAGAACCAATCATCGCGCCCATACTCGGGAAG‑GACACTTTCAGGATGCTGCCGTACATTGCAGGCCTGATGACCCCAAGcacgacggggaacagggcagggcc > 1:42260/1‑216 (MQ=255) atgatgatgGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCCGGCTCAGTGACCCCAAGCCAGGCGGCGATACCGGCAGGCAc > 2:726254/1‑239 (MQ=255) ataaggatgGCCAAAGCCATTACCAAGGCAAA‑CCCCTGCCA‑TTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCggcaggca < 2:275945/233‑1 (MQ=255) tgGCAATAGCCATTGCCAGCGCAAA‑CCCCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCGGCAGGCACGGAGAt < 2:1037326/238‑1 (MQ=255) gggcaTAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCGGCAGGCACGGAGAtct < 2:1087377/235‑1 (MQ=255) tgccccttccccccgcAAC‑CCCCTGCCA‑GT‑GCTCGGGTTAAAACGA‑GAGACTTCCCGGCAGGCCCCCCACGCCGATGCCATT‑CGCCATAACTCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCGGCAGGCACGGAGATCTcgcg < 1:725041/225‑1 (MQ=255) acgcATTGCCAGCCGAAA‑CACCGGCCA‑GGAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCGGCAGGCACGGAGATCTCGCGtt < 2:1094074/236‑1 (MQ=255) ccgttGCCAGCCCAAA‑CCCCCGCCA‑TGTGCTG‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCGACGCCGGTGCCGTT‑CGCCATACCGCCGTTCAGGCCGCATAGCAAGCCTGGCAGACCAGAACCAAGCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGGCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCGGCAGGCACGGAGATCTCGCGTTCa < 1:801066/236‑1 (MQ=255) tGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGCAA‑TTTCAGGGTGACGCCGTACATTGCAGGCTCAGTGACACCAAGCCAGGCGGGGATAcaggcagggaacgggaacccggggtcaatgg > 1:1304113/1‑216 (MQ=255) gCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAACCCAGGCGGGGATAGCGGCAGTCCCGGGGATCCCCGCTTCATtgt > 2:274017/1‑238 (MQ=255) cgcAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGACGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCGGCAGGCCCGGGGATGTCGCGTTCATTTGGCttcg > 2:611011/1‑237 (MQ=255) | TACCGCTACCCGTGGTGTCCTGAAAACTCTTTGGATAAATCTGGTAGATAACGCCGTTTTGCCACCAGTGGGGAAGATGAGTCATTACGTTATTCCTGCGAATGCGAGGGGGCGCAATTGCGCCCCG‑AAGAAAATTAAACAATGTCCAGCGTGCCCAGGCGGTATTTCCGCTG‑ATAG‑ATAAACGAGGTGAGTACAATCGGGATGATGATGGCGATAGCCATTGCCAGCGCAAA‑CACCTGCCA‑GTAGCTC‑GGTTGAATCGA‑GAGAATTCCCGGCAGGCCGCCTACGCCGATGCCATT‑CGCCATAACGCCGTTCAGGCCGCATAGCAATCCTGCCAGACCAGAACCAATCATCGCGCACAGCATCGGGAAGCGATA‑TTTCAGGTTGATGCCGTACATTGCAGGCTCAGTGACCCCAAGCCAGGCGGAGATAGCGGCAGGCACGGAGATCTCGCGTTCATTGTGCTTGCGG > NC_000913/4464626‑4465093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |