| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,649,242 | A→C | 18.6% | V1015G (GTG→GGG) | yfhM ← | bacterial alpha2‑macroglobulin colonization factor ECAM, anti‑host protease defense factor, periplasmic inner membrane‑anchored lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,649,242 | 0 | A | C | 18.6% | 133.6 / 2.2 | 62 | V1015G (GTG→GGG) | yfhM | bacterial alpha2‑macroglobulin colonization factor ECAM, anti‑host protease defense factor, periplasmic inner membrane‑anchored lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (31/17); new base C (4/9); total (35/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.51e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
ATAACCCGGCAATGCTCGCACCGGGATAAACAGCGTAGTACG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGACGCCCCTGAC > NC_000913/2649007‑2649473 | aTAACCCGGCAATGCTCGCCACGGGATAAACCGCCGTGTCCG‑CCCACCTGGCCCAAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCactt < 2:541687/239‑1 (MQ=255) tAACCCGGCAATGCTCGCACCGGGATAAACAGCGTAGTACG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGGATCGCCACTCGCCATAAAGCGCGGCATGTTACGTTCAGCAATCACCGGTGCGGCAACTATCacttt > 2:1047906/1‑239 (MQ=255) ggtgtttataagcgacagaaaCACCGTAGTACG‑CACCCCTGGCGCTAATTCAACGGCGGCGGGGGAATCGGTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCGCTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGt < 1:1029759/221‑1 (MQ=255) cAATGCTCGCACCGGGATAAACAGCGTAGTACG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCACCAATCCCCCGTGCGGCAACTATCCCTTTACTTTCGt > 2:810001/1‑239 (MQ=255) gaTGCCCGCACGGGGATGAACAGGGT‑GTTCGCCAGACCGGGCGATAATTCAACGGCGGGGGGTAAATCGCTGGCCGGTCAAAGCAAACCAGGGCCGGTCAGGGCAACGTTCAGTTTGTGCGGTTTACCGGTAAGATTAGTGATATCCATCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCCCTTTACTTTCGt < 1:186913/237‑1 (MQ=255) aaaCAGCGTAGTACG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTg < 2:893014/239‑1 (MQ=255) cGTAGTACG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGAGCGGCCACTATCACTTTACTTTCTTTG‑CTACCGAAgccctttcccggcc > 2:551756/1‑226 (MQ=255) cGTAGTACG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CCCGAGGTATCGCCACTCGCCATAAACAGCGGCATGTTAAGTTCAGCAATCACCCGTGCAGCAACTATCACTTTACTTTCGTTG‑CTACCGCAGTCATCTACCGTcc > 2:978042/1‑239 (MQ=255) taCG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGGGCGGCAACCATCACCTTACTTTCGTTG‑CTACCGAAgccttcccttttaaccat > 2:1029759/1‑221 (MQ=255) aCG‑GACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGc < 2:779189/237‑1 (MQ=255) cG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCCGTTTTTGCGGTTTATCGGCAAGATTAGGGAAATCCAGCGTCCGA‑CGCGCGGGATTGCCACCCGCCATAAAGCGCGGCATGTTTCGTTTCGCAAATACCCGGGCGGCAACTATACCTTTCATTTCGTTT‑CTACCCaaacaacactcccaccagggctg > 1:399185/1‑218 (MQ=255) agggacagaaTTCCACGGGTGCGGGGGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATg < 2:1265482/231‑1 (MQ=255) gcgcTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCCTAAAGAGCGGCATGTTCAGTTCAGCAATCACCCGTCGGGCCACTACCCACTTACTTTCCTTG‑CTACCCATTGCAACTCCCCTCCAGGccttggccacaaa > 2:284393/1‑226 (MQ=255) aCCAGGTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGGGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAg < 2:599532/239‑1 (MQ=255) ttCAAGCAAACCACTGGCGGTCAGGGCAAAGTTCCGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCCACTATCACTTTACTTTCGTTT‑CTACCGAAGTCATCTGCCGTCCAGGCTTTGGCCATGACGCGCCATTCCCCGTTATAATCGCCAATCCGcccggtg > 2:648498/1‑232 (MQ=255) aCCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGGTTATCGGCAAGATTAGTGATATCCAGCGTCAGA‑CCGCAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATAACCGGGGCGGCAACCATCACTTTACTTTTGTTG‑CTCCCCCAATAATTCTCCGTCCAGCCCTCCGCCCATACCCGCCATTCCCCGTTAAAAACCCCaaacagccgcgaaaaacaca > 1:1244400/1‑218 (MQ=255) tcTGGCGGGCAGGGCCATTTTTCTTTTTTGGGGTTTTAGGGAAAAATTGGGTGTACCCAGGGTCAGA‑CGGGTGGTATCGCCCCTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGc < 1:605568/238‑1 (MQ=255) tGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc < 2:399185/239‑1 (MQ=255) gtgggctaGGGCAACCTTCATTTTTTGCGGTTTAT‑GGTCAGAATTGGGTACTCCCCGCTCAGAGCGCGAGGTTTCGCCCATCGCCATAAAGCGCGGCATGTTCAGTTCAGAAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCCATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCt < 1:1016264/232‑1 (MQ=255) aGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCCATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTTCGCCATGaaccgcc > 2:84961/1‑178 (MQ=255) cGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGACGTCATCTGCCGTCCAGGCTTGCGCCATGCCGCGCCATTACCCGGTAAAACAGCCAACCGGCCGGGTTACCCAACGTTCGCCCTggtttttaagggtt > 1:750747/1‑226 (MQ=255) ttGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACGGAGCCTTCCCCCTGTTCGTTGGCAGTTACCGGCAgg > 2:401765/1‑237 (MQ=255) aGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCCCTTTACTTTCGTTG‑CTACCGAAGTCCTCTGCCGTCCAGGCTTCCGCCATGACGCGCAATTCACCGTTAAAATCGCCAAACGGCAGTGTAACCGACCGCTCCCCCGTGTCGTTTAGCGTTAACGGCAGCGCCCGCCGCACCGCAAAATTGa > 1:724531/1‑239 (MQ=255) tCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCCGTTCAGCAATCACCGGTGCGGCAACTATCACTTTCCTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCCGGCTGTCGCCATGACGCGCAATCTCCCGTTAAAATCGCCCATCGGCCGTGTAACCGCGCCTTTCCCCTGTTCGCGTCGCGTTACCGCCCGCGCCCGCTGCACGCCCACAATGACgggtgt > 1:759951/1‑234 (MQ=255) tCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGACGTCATCTGCGGTCCAGGCTTGCGCCATGACGCGCAATTACCCGTTAACATCGCCAACCGGCAGGTGACCCCAGCCTTCGCCCCTATCGTTGAACGTTACCGGCAGGCCCTGCTGCACGCCaaaagtgcagggtta > 1:1083888/1‑226 (MQ=255) tCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGCCGCCCAATTCACCGTTAAAATCGCCCATCGGCCGGGTAACCCAGCCTTCGCCCGGTTCGTTGAGCGTTACCGGCCGCTCCTCATGCACGACAACATTTAGCTGAtt > 1:254813/1‑239 (MQ=255) tCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCCCGCCAATATTGACGTGAtt > 2:731281/1‑239 (MQ=255) tCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGACCGTTACCGGCAGCGCCTCCTGCACGACACTATTGACGTGttt > 2:1073730/1‑239 (MQ=255) tCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGGGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGCAAAAATTGACGTGAtt > 2:750194/1‑239 (MQ=255) tCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCACCAATCGGCAGTGTAACCGGGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAAAATTAACGTGAtt > 2:1257422/1‑239 (MQ=255) cGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGGGCCTGCTGCCCGGCAATATTTACGGGATTGACcg > 2:1160132/1‑239 (MQ=255) cGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGGGATTGACcg > 2:1140832/1‑239 (MQ=255) cGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCGGCTGCCCGCCAAAATTGAGGGGTTTGAcgg > 1:1051438/1‑237 (MQ=255) gTCAGG‑CCCGAGGTACCGCTCCTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCCCTTTACTTGCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAAGCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACcgg < 2:254813/239‑1 (MQ=255) gctgggctactcgcagtctccATAAACCGTGGGATGTTCTGGTCGGGAAGCACCGGGGCGGAAACTAGCACGTTACCTTCGTTG‑GTTCCGAAGGCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGGCAATCGGCAGTGTAACCGAGCGTTCGCCCTGTTCGTTGAGCGTTCCCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGttt < 1:349810/220‑1 (MQ=255) cgcgAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGgtt > 2:363580/1‑239 (MQ=255) tttataaggagtatccATATAGCGCTGCATTTTCAGTGCAGCAATCTCCGGTTCGGCTACTATCCCTTTACTTTCTTTG‑GTGCCGATGTCATCGGCCGTCCAGGCTTTCGCCTTGACGCGCAATTCTCCGTTAAAGGCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTaccac < 1:985956/225‑1 (MQ=255) tCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATTACGCGCAATTCCCCGTTAAAATCGCCCATCGGCATTTTAACCGAGCCCTCGCCCTGTTCGTTGAACGTTACCGGCAGCGCCTCCTGCACGACAAAATTGACGTGATTGACCGGCGGGTTaccaccc > 1:1322675/1‑236 (MQ=255) gacagctaTAAAGCGCGGCTTTTTCCGTCCAGCAATCCCCGGTGCGGCAACTATCCCTTTACTTTCGTTG‑CTACCGAAGTCACACGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAAGCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGttt < 1:153682/230‑1 (MQ=255) cTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCCGGGTAACCGGGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCCGCCCCTGCTGCCCGACAATATTTCGGTGATTTACCGGCGGTTTtcccacaccagtac > 1:1320072/1‑227 (MQ=255) cGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTc > 1:1141371/1‑88 (MQ=255) cGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTc < 2:1141371/88‑1 (MQ=255) gcgGTATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAAGTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCAt < 2:504955/237‑1 (MQ=255) gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTAACCCTGTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCAt < 2:1229326/237‑1 (MQ=255) cgggCATGTTCAGTTCAGCAATCCCCGGGTCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCGGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCAt < 2:1051438/235‑1 (MQ=255) ggCATGTTCAGTTCAGCAATCGCCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGc < 2:12809/238‑1 (MQ=255) ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGCCAATATTTCCGTGATTGACCGGCGGCTTCCCCCCCCGGTTctgacccgttcttatca > 2:985956/1‑222 (MQ=255) ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTTCCACCCCGTTTCAGCCCA‑TCAcccaccc > 2:1074139/1‑233 (MQ=255) ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGCCGGTTTTCCCCCAACTTTCAGcccctccccctgc > 2:153682/1‑225 (MQ=255) ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGAACGACAATATTGACGGGATTGACCGGCGGGTTACCCCCACGGTTTAGGTCC‑TCAcccaccc > 2:97741/1‑233 (MQ=255) ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGCTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGCCAATATTGACGGGATTGACCGGCGGTTTAACACCCCGCTTTCGCCCA‑Tccccccccc > 2:195009/1‑233 (MQ=255) ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTACCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATTACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGGGTAACCAAGCCTTCGCCCTGTTCGTTGAGCGGTACCGGCAGCGCCTGCTGCCCGCCCATATTGACGTGGTTGGCCGGCGGGTTTCcaccaccctatagcccctaaccaacacc > 1:1270333/1‑217 (MQ=255) cAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACCTTTTAGCTCA‑TCCCCCCCGCGCCCGAAACGCaga > 2:821781/1‑236 (MQ=255) cAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTACGCGTTACCGGCAGCGCCTGCCGCACGACAATATTGACGTGCTTTGCCGGCGGGTTTCCACCACCGTTCAACGCC‑ACACCCTCCCCCCCCAAACACACAGc > 1:799754/1‑238 (MQ=255) ccGGTGGCGCAAATATCCAGTTACTTTCGTTGTATACC‑AATTCATCCGCCCGCCAGGGTTGCGCCATGACGGCCAATTCACCGTTAAAATCGCCAACCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGAAAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGa < 1:1073730/239‑1 (MQ=255) ccGGTCCGGCAACTATCCCTTTCGTTTCGGTA‑CTACCGAAGTCAACTGCCGTCCGGGCTTGCGCCATGACGCGCAATTCCCCGCAAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGa < 1:195009/239‑1 (MQ=255) ccGGGGCGGCAACTTCCTCTTTACTTTCGTTG‑CCTCCCAAGTCATCTGCCTGCCGGGGTTGCGCCAGGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGa < 1:1074139/239‑1 (MQ=255) cGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGAc < 2:724531/239‑1 (MQ=255) ggTGCGGCAACTATCCCTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGACg < 2:1075611/239‑1 (MQ=255) gggCAACTATCACTTTTCTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCGTGCGCCGTGGCGCGCAATTCCCCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGACGccc < 2:759951/237‑1 (MQ=255) cGGCCACTTTCACTTTCCTTTTGTTT‑CTACCGAGATCATCTGCCGCCCAGGCTTGCGCCCTGGCGCGCAATTCACCGTTAAAATCGGCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCAGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGACGcccc < 1:551756/239‑1 (MQ=255) cGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCCCGTTTCGGCCCACTCCCCA‑CGCCCACCAAACGCCGGCATGCCAGACGccc > 2:985648/1‑238 (MQ=255) ggCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGACGcccc < 2:33004/238‑1 (MQ=255) aCTATCCCTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGACGCCCCTGAc < 2:807441/238‑1 (MQ=255) | ATAACCCGGCAATGCTCGCACCGGGATAAACAGCGTAGTACG‑CACACCTGGCGCTAATTCAACGGCTGCGGGTGAATCGCTGACCAGTTCAAGCAAACCACTGGCGGTCAGGGCAACGTTCAGTTTTTGCGGTTTATCGGTAAGATTAGTGATATCCAGCGTCAGA‑CGCGAGGTATCGCCACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTG‑CTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCGGCAGCGCCTGCTGCACGACAATATTGACGTGATTGACCGGCGGTTTACCACCACGTTTCAGCTCA‑TCACCATCGCCACCGAAACGCAGAGCTGCCAGACGCCCCTGAC > NC_000913/2649007‑2649473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |