New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =5 (0.080)65 (1.150) 43/386 NT 90.5% coding (290/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 1209619 = 9 (0.160)pseudogene (1/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

TACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCA  >  NC_000913/1209391‑1209846
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                    
tgacattgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccataggcagatgcttttgcggcattccacccccacttaatgattactgattgctcaataccaccaatcatacccgtcatagccatgaaaccggtgcggcctaaactagccgttacgacattgaattttgtaccttcccccaaacaaac                                                                                                                                                                                                                                      >  2:346688‑M2/229‑229 (MQ=255)
     ttgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgactgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgccctaatttaacccttgctgcatttagttttgcgccctctcccaaaccaaCGGTTa                                                                                                                                                                                                                                 >  2:722262‑M2/224‑229 (MQ=255)
     ttgtcataatttgcaacaacggcaacacaggcattattaaacgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctcatgtagccgttcctgcattgggttttgctccttttcccaaaccaaCGTTTa                                                                                                                                                                                                                                 >  2:634013‑M2/224‑229 (MQ=255)
            agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAAGCAACGTTTCTGAAAAt                                                                                                                                                                                                                          >  1:582498/1‑229 (MQ=255)
                 ccTTTAACAACCCCCCGCCCGGCATCCCAGCCAAGAATAAACTCACCACGTAAATCAGGCAATTTAGTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATgaaga                                                                                                                                                                                                                     <  2:403679/229‑1 (MQ=255)
                    gTATCAAACCCCGCCCAGTGCTCCAAGCCAAGAATAAACTTACCACGTAAATCAGGAAAGTTATGTGGCGGATAAGCTTTTGCTAGTTCCGAGTATGCTGCAGCAGAAAAAGCGGCACGATGGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGGCACGGAACCGGGACGCCAACAGGTAATGCAGAGCCGTCTCCCAAACCAAGGttttcgagagccgtttgca                                                                                                                                                                                                                  <  2:471860/229‑17 (MQ=255)
                           tCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAACAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCCCGGAACCGGGACACCACCAGGTAATGCCAGGCCGTCTCCCAAACCAACGATTATGAAAATGAAGAAAAAAAAAGc                                                                                                                                                                                                           >  2:167501/1‑229 (MQ=255)
                                cgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCACCAGGAAATGCAGAGCCTTCTCCCCAACCAACGGTTATTAAAAAGAAGAAAAAAAAAGCaaa                                                                                                                                                                                                        >  2:333494/1‑227 (MQ=255)
                                             acgcaaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggactagctatgaaaccggtgcgtcctaatgaagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGACAATGAAGAAATAACAAGCAAATGGCATcattctttc                                                                                                                                                                                         >  2:511491‑M2/184‑225 (MQ=255)
                                               ccaaccgtgaattcaactgtatttccactccccacagaggcagatgcttttgcggcattccccccccactgaatgattactgattgctcaatcccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                                                                                                                                        <  1:744601‑M2/47‑1 (MQ=255)
                                                 aaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAATTGAAGAAATAACAGGCAAATGGCATCATTCCTGCtttt                                                                                                                                                                                     >  1:170287‑M2/180‑229 (MQ=255)
                                                 aaccgggaatacaactgtatttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccgatgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaacccaaCGTTATTGCAAATCAAGCAATAACAAGCAAATGGCATCATTCCTCCtttt                                                                                                                                                                                     >  2:246526‑M2/180‑229 (MQ=255)
                                                      ggaattcaatcttatttccatcccccccagaggcatatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAg                                                                                                                                                                                <  2:547883‑M2/55‑1 (MQ=255)
                                                                    tttccatcccccccagaggcagatgcttttgcggcattccacccccactgaatgcttactgattgctcaataccaccaatcataaccggtatagctatgaaaccgtggcgtcctaatgtagccgtttctgcattgagttttgttccttttcccaaaccaaCGTTTATGCAAAGGAAGAAATAACAAGCAAAAGGAATCATTCCTGCTTTAACCAGGGGGATTTAAAATg                                                                                                                                                                  >  2:268417‑M2/161‑229 (MQ=255)
                                                                        cttcccccccagaggcatatgcttttgcggctttccacccccactgaatgattactgattgctcaattccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                              <  2:52609‑M2/73‑1 (MQ=255)
                                                                        catcccctccaggggagtatgctttggcggcattccacccccaatgaatgattcctgattgctcaattcccccaatcataaccggtatagctatgtaaccggtgcgtcctaatgtagccgttgatgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                              <  1:641982‑M2/73‑1 (MQ=255)
                                                                        cactccccccataggctgattcttttgcggccttccacccccgctgaatgtttactgcttgcccaattacaccaatcataacctgtatagctttgaaaccgttgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                              <  2:676247‑M2/73‑1 (MQ=255)
                                                                        cAGGCAATTTATTTGTCGGATAAGCCTTGGCCATTTCCGGGTATTACTCAGAAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAATGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTa                                                                                                                                                              <  1:333494/229‑1 (MQ=255)
                                                                          tcccccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgaggtttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACaagctaaag                                                                                                                                                            >  2:689311‑M2/155‑225 (MQ=255)
                                                                            ccccccaggggcggagtgttttgcggcatgccccccccactgaaagattaccgagggctcaatacacgcaagcataaccggtataggtatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAGGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                                                                                                          <  2:401370‑M2/77‑1 (MQ=255)
                                                                            ccccccagaggcagatgcttttgcggcattccccccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                                                                                                          <  1:634014‑M2/77‑1 (MQ=255)
                                                                              ccccagaggcagatgcttttgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAACGGATTATTGGCt                                                                                                                                                        >  2:518658‑M2/151‑229 (MQ=255)
                                                                                   gaggcagatgcttgtgcggcattccacccccactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                                                                                                                                                   <  1:518658‑M2/84‑1 (MQ=255)
                                                                                    atgcagatgcttttgcggcattcaaccccaactgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaacccaaCGTTTATGAAACTGAAGAAATAACATGCAAATGGCATCATTCCTGCATTTACCAGTGGGATTTAAAAATCTTATTGGCTATGTAc                                                                                                                                                  >  2:66600‑M2/145‑229 (MQ=255)
                                                                                     tGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGACAATGAAGAATAAACAAGCAAATGGCACCATTCCTGCTTTTACAATGGGGGTTTAACATGCTCATTGGCTATgaatg                                                                                                                                                 >  1:489960/1‑225 (MQ=255)
                                                                                           ggcttttgcggcattccacccccagtgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc                                                                                                                                           <  1:619863‑M2/92‑1 (MQ=255)
                                                                                             cttttgcggcattccacccccactgaatgattacagattgctcaattccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATTCTTATTGGCTATGTACGCGTATcaa                                                                                                                                         <  1:346688‑M2/94‑1 (MQ=255)
                                                                                                  gcgccatgccacccccactgaatgattacggtttgctcactcacacaaaacataaccggtatagctatgaaaccggtgcgtcctaaagtagccgttgctgtattgagtattgcgccttcgcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                                                                                                    <  2:650112‑M2/99‑1 (MQ=255)
                                                                                                   cgccattccacccccactgaatgattactgattgctcaattccaccaatcattaccggtatagctttgaaaccggtgcgtcctaatgtagccgttgcttaattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                                                                                                    <  2:755309‑M2/99‑1 (MQ=255)
                                                                                                     gccttcccccccctctgtaggattcatgattgctcaatgcccccaatcatacacggtatagctaggaaaccggtgcggcctaatgtagccgttgcagcaatgatgtttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                                                                                                                 <  2:278340‑M2/102‑1 (MQ=255)
                                                                                                        gtccccccccatcgaatgattactgattgctcaatcccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGGTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCa                                                                                                                               <  1:567738‑M2/104‑1 (MQ=255)
                                                                                                          cccccccctctgaatgattactgattcctcaataccaccaatcataaccggtatagttattaaaccggtgcgtcctaatgtgtacgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                                                                                                                            <  2:626464‑M2/107‑1 (MQ=255)
                                                                                                          ccccccccactgtatgattgctgatttctcaataccaccaatcataaccggtagagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTGCCAGGGTGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCATaa                                                                                                                            <  1:153293‑M2/107‑1 (MQ=255)
                                                                                                            acccccatttaattattactgattgctcaattccatcaatcataaccggtatagctttgaaaccggtgcgtaataatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATAAAAAAGAAGAAATAACTAGCCAATTGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                                          <  1:99478‑M2/109‑1 (MQ=255)
                                                                                                              ccccagtgaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtccgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAacac                                                                                                                         <  1:722263‑M2/110‑1 (MQ=255)
                                                                                                                     gaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAATTAACAAGCAAATGGCATCATTCCTGCTTTTACCAGCGGGATTTAACATGCTTATTGGCTATGTACGCGTATCCACAAATGTCCCAAACACAGATCTAc                                                                                                                 >  1:331983‑M2/112‑229 (MQ=255)
                                                                                                                     gaatgattactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACCCGTATCAAAAAATAACCAAAACACAAATCTa                                                                                                                  >  2:77913‑M2/112‑228 (MQ=255)
                                                                                                                      aatggttactgattgctcaattccaccaatcataaccggtaaagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACa                                                                                                                <  1:104911‑M2/119‑1 (MQ=255)
                                                                                                                           tttcttattgcctaaaccccacaatcataaccggtatagctatgaaaccggtgcgtcctaatttagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATTATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                                           <  2:331983‑M2/124‑1 (MQ=255)
                                                                                                                           tttctgaattctcaatgccaccaatcataaccggtatagctattaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                                           <  1:470372‑M2/124‑1 (MQ=255)
                                                                                                                           ttactgcttgctcaataccgccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                                           <  1:268417‑M2/124‑1 (MQ=255)
                                                                                                                           ttactgattgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAACTGAAGAAATAACAAGCAACTGGCATCCTTCCTGCTTTTACCAGGGGTATTTGACATGCTTATTGGGTCTTTACGCGTACCAACAACAGACACGAAAACacatctaacacga                                                                                                            >  2:138409‑M2/106‑222 (MQ=255)
                                                                                                                            tactgattgctcaataccaccaatcatacccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTTTACACAAATGaccaaaacacagaattccacagaaa                                                                                                          >  2:437396‑M2/105‑217 (MQ=255)
                                                                                                                                  ttgctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTCCGCGTATTAACAAATGCCCAGAACAACGATTTACAACATAATccgc                                                                                                     >  2:470372‑M2/99‑228 (MQ=255)
                                                                                                                                     cacaatacccccaatcataaccggtattgctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa                                                                                                 <  1:246526‑M2/134‑1 (MQ=255)
                                                                                                                                      ccaattacaccaatcataaccggtatagctatgaaaccggttcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAc                                                                                                <  1:23247‑M2/135‑1 (MQ=255)
                                                                                                                                      ccaatccccccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAc                                                                                                <  1:511491‑M2/135‑1 (MQ=255)
                                                                                                                                         ataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTCCTTTTAACAGGGGGATTTAACAAGCTTATTGGCTATGTACGCGTATCAAAAAAAGACCCAAACAAAGATCTACAACGTAAGGCGCTGGACtgt                                                                                             >  2:707844‑M2/92‑229 (MQ=255)
                                                                                                                                         ataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTCTATGAAACTGAAGAAATAACAAGCACATGGCATCATTCCTGCTTTTACCAGGTGGACTTAACATGCTTATTGGCTATGTCCGCGTTTCAACAAGATCCAAGAACAAAGACTCACAACGTAATGCGATGAACtgt                                                                                             >  1:352762‑M2/92‑229 (MQ=255)
                                                                                                                                               ccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                                             >  2:143669‑M2/86‑127 (MQ=255)
                                                                                                                                               ccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctacattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                                             <  1:143669‑M2/42‑1 (MQ=255)
                                                                                                                                                         ccggtttaattttgaaaccggtggcgactaatgtgtccatgtgtgcattgagttttcctccttcccccaacccaaTGTTTTGTAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGa                                                                            <  2:54312‑M2/154‑1 (MQ=255)
                                                                                                                                                         ccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                                                                                                    <  2:55210‑M2/99‑1 (MQ=255)
                                                                                                                                                         ccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                                                                                                    >  1:55210‑M2/76‑174 (MQ=255)
                                                                                                                                                             tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                                                                                                                                                         <  1:192229‑M2/46‑1 (MQ=255)
                                                                                                                                                             tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                                                                                                                                                         >  2:192229‑M2/72‑117 (MQ=255)
                                                                                                                                                             tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                                                                                                                       >  2:504042‑M2/72‑183 (MQ=255)
                                                                                                                                                             tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                                                                                                                       <  1:504042‑M2/112‑1 (MQ=255)
                                                                                                                                                             tatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGctgaaatggccaggagcggacatgatttt                                                                        >  2:642768‑M2/72‑215 (MQ=255)
                                                                                                                                                               tgggCGGAGTTGGTGAACGCCACGAAACCGGAACACCAACAGGGAATGCAAAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAACAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTg                                                                      <  1:377191/227‑1 (MQ=255)
                                                                                                                                                                 gttatgaaaccggtgggtcctaatttagccgttgctgcattgagtttggcacctgctcccaaaacaaCGGTTATGAAAATGAAGAAATAACAAGCAAATGGCATCAGTCCGGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGaa                                                                    <  2:272859‑M2/162‑1 (MQ=255)
                                                                                                                                                                 gctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGaa                                                                    <  1:77913‑M2/162‑1 (MQ=255)
                                                                                                                                                                    atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAGTGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTAACCAGGGGGATTTAACATGCTTATTGGCTATGCACGCGTATCAACAAATCACCCAAACACATATCTAAAACGTAATGCGGTGAACTGTCAAGGAGTCGAACTGATTTttgaaacc                                                                 >  2:640435‑M2/65‑226 (MQ=255)
                                                                                                                                                                    atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCACATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAGTACCAGAACAACGCTCTCCAACGTAATGCGCTGACTTGAGCAGGACATGAGCAAATTTTTGAAAAc                                                                 >  2:520131‑M2/65‑229 (MQ=255)
                                                                                                                                                                    atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATAAAAATGAGGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACCCGTATCAACAAATGACCAGAACACAGATCTCCAACGTAATGGACTAAACTGTGAAGAATGCGAGCTGATTTttgaaaaa                                                                 >  2:32281‑M2/65‑226 (MQ=255)
                                                                                                                                                                       aaaccggtgcgtcctaatgtagccgttactgcattgagttttgctccttctcccaaaccaaCGTTAATGAAAATGAAGAACTAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACTCGTATCAACAAATGACCAGAACCAATATCTCTAACTCAATCCGCTGACAGAGCAAGGATGCGAACTGATTTTTAAAAAAAAg                                                              >  2:48968‑M2/62‑229 (MQ=255)
                                                                                                                                                                             gtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATTTACGCGTATCAACAAATGACCAGAACACAGATCTCAAACGTAATGCGTGAAACTGGCAAGGATGCGACCAAATTTTTTAagaaaagaaaaa                                                         >  2:53976‑M2/56‑227 (MQ=255)
                                                                                                                                                                             gtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAg                                                         >  1:631943‑M2/56‑228 (MQ=255)
                                                                                                                                                                             gtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATACGAGCTGATTTTTGAAGACAAGATAAg                                                         >  1:537173‑M2/56‑228 (MQ=255)
                                                                                                                                                                             gtgcgtcctaatgtagccgttgctgcattgagttttgctcctgctcccaaaccaaCGTTTATGAAAATGAGGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCCGGAGGATTTAACATGCTTATTGGCTACGTACGCGTATACACAAATGACCAGAAAACAGATCTACACCGTAATGCGCTGAACTGTTCAGGATACGAGCAAATTTTTcaaaacaaaacaaa                                                         >  2:328456‑M2/56‑222 (MQ=255)
                                                                                                                                                                                  tcctaatgtagccggtgctgcattgaattttggtccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTGACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGAAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGcac                                                   <  1:138409‑M2/179‑1 (MQ=255)
                                                                                                                                                                                            gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCAGGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCg                                           >  1:553994‑M2/41‑227 (MQ=255)
                                                                                                                                                                                              cgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCACCAAATGACCAGAACACAGATCTACAACGAAATGCGCTGAACTTGGCAGGATACGAGCTGATTTTTGAAGACAATATAAGGGTCACAAAGACCCAAAg                                       >  2:89574‑M2/39‑229 (MQ=255)
                                                                                                                                                                                                    ctcattgagttttgctacttttcccaaaccaaCGTTTAAGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAGGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGCCAAGATAAGCGGCACAAAGCCCGAAAGGCCggg                                 <  2:418834‑M2/197‑1 (MQ=255)
                                                                                                                                                                                                             tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa                                                                                                 >  2:415423/1‑157 (MQ=255)
                                                                                                                                                                                                             tGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGaa                                                                                                 <  1:415423/157‑1 (MQ=255)
                                                                                                                                                                                                                tgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGACCTGTGCAGGATGCGAGCTGATTTTTGACAACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACtgaaaaaaag                     >  2:26426‑M2/21‑227 (MQ=255)
                                                                                                                                                                                                                  agCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGAGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGc                   >  2:537417/1‑229 (MQ=255)
                                                                                                                                                                                                                   tccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCt                  <  1:642769‑M2/212‑1 (MQ=255)
                                                                                                                                                                                                                   tccttcccccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCt                  <  1:437396‑M2/212‑1 (MQ=255)
                                                                                                                                                                                                                   tcctgtccccaaacataCGTTTATGAAAATGAAGAAATAAAAAACAAATGGGATCATTCCTGGTTTTACCAAGGGGATTTAACATGGTTATTGGCTATGTACGCGTAGCAACAAATGACCAGAACACAGATCTACAACGTAATGCGGTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCt                  <  2:402742‑M2/212‑1 (MQ=255)
                                                                                                                                                                                                                   cccttctcccaacacaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCt                  <  1:667615‑M2/212‑1 (MQ=255)
                                                                                                                                                                                                                                   aCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                                          <  1:137153‑M2/109‑1 (MQ=255)
                                                                                                                                                                                                                                   aCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                                          >  2:137153‑M2/2‑110 (MQ=255)
                                                                                                                                                                                                                                   aCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCCCAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCa  >  2:219036‑M2/2‑229 (MQ=255)
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                    
TACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCA  >  NC_000913/1209391‑1209846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.