| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,734,567 | G→A | 15.1% | D45N (GAT→AAT) | mepH → | murein DD‑endopeptidase, space‑maker hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,734,567 | 0 | G | A | 15.1% | 138.8 / 2.3 | 55 | D45N (GAT→AAT) | mepH | murein DD‑endopeptidase, space‑maker hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (41/5); new base A (2/7); total (43/12) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.16e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTCTTCTTCTATGCATTAGAATCATCAAGTTTTGTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATAAATCGCATTGTGTGAAA > NC_000913/1734352‑1734794 | tctcTTCTTCTATGCATTAGAATCATCAAGTTTTGTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGAACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCCTATCACCAAAAACCCAAATaaaaaacaaa > 2:94924/1‑223 (MQ=255) tGCATTAGAATCATCAAGTTTTGTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCCCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAGGCAAGCCTGGTCGAGTTCTGCTACCACTCATATCTCCAAAAAAGCTGATAAAAAGAAAAGCCCGGCAacac > 1:401253/1‑226 (MQ=255) tGCATTAGAATCATCAAGTTTTGTAAATCAGACGCAAGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGCTACACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTAACACCCTTCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGCGAGTTTTGCTACCCAACAAATAACCAAAACACAAAGTAAAAACAAAAGAACgcccaaccc > 2:443367/1‑221 (MQ=255) tAGAACCATCAAGTGTTGTAAATCAGCCGCAGGCATGATAGACCTGCCTTTACAGGTGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCaaaa < 1:724277/229‑1 (MQ=255) gAATCATCAAGTTTTGTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGCTAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGCGAGTTCTGCTACCAATCATATCACCAAAAAAGCAGAAAAAAAGAAAAGCACGGCAACCACCaaaaaa > 2:727533/1‑228 (MQ=255) ttttGTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTCCCACTCATATCACCAAAAAAGCAGATCAAAAGAAAAGACCGCCAACAAccaaaaaaaccaaaaaaaa > 2:246100/1‑228 (MQ=255) gTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGc > 1:449095/1‑228 (MQ=255) aCGCAGGCATGATAGACCTGCCTTTACAGAGTGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCAATGAAACCACCAAAAAGACCCAAAAAACACCGaaaaaaaac > 2:574707/1‑226 (MQ=255) cGCAGGCATAATAGCCCTGCCTTTAAAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTCCGATCCCGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTAAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAgccg < 1:445403/229‑1 (MQ=255) cgcgtcataatgcgccTGCCGTTACAGGGGGCCGCGCAGTTGCTGGGATAAACCGTTTTTCGATCGCTCTCGGGGCTTTGCTTTTTACCCCCCTGCCGTTACCGCTTAGGCCCCATGCTTAAAAGAAAGCAAGGGAGATTTCTGCTACAACTAATATCACAAAAAAAGCAGATAAAAAGAAAAGCCAGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAgccgc < 2:397996/215‑1 (MQ=255) ccTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCCCCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAgaagga > 1:548042/1‑224 (MQ=255) ccTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTGACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAACGCAAGCCAGGGAGAGTTCTGCTACCAATCATTTCACCAAAAAACCAGATAAAAAGAAAAGCAAGGCAACCACCAACAAAACCCAGAAAACAGCGAAAAAAACCCGCAGTcaaacgacag > 1:753413/1‑223 (MQ=255) gCCTTTCCAGAGGGCCCTTCAGTGGCGGGGATAAACCGTATTCCGATCCCGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTCCCACTCATATCACCAAAAAAGCAAATAAAAAGAAAAGCACGGCACCCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCa < 1:94924/229‑1 (MQ=255) ccTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACACCGAAAAAAGCCGCCAGTAAAAGAAAGACCa > 1:740090/1‑228 (MQ=255) gggACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCACAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCCGCTAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAAAAGCGAAAAAAACCGCCAGTAAAAGCAACACCAAAAACcaaaac > 2:733914/1‑227 (MQ=255) gggACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATCTCCCCAACAAAGCAGATAAAAAGAAAAACCCGGCCACCACCAAACAGACCCAGAAAAAAGCCAAAAAAGCCGCCAGCAAAAGAACGACCAaaaacaaaaca > 2:165457/1‑228 (MQ=255) gggACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATTACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCACGTAAAAGTACGACCAAAAGCAAAAca > 1:240890/1‑228 (MQ=255) gggACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGACAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAACAAGACCCAGAAAACAGCACACAAAGCCGCCAGGAAAAGATAGACCAAAAGAAAAAca > 1:264894/1‑228 (MQ=255) cTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGcatct > 1:24367/1‑229 (MQ=255) cTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATAACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAAACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCcctcct > 2:186999/1‑229 (MQ=255) tGGCGCGGATAAACCGTATTTCGATCCCGCTCTGTGCTTTACTTTTTACCCCCCTGCCTTTAACGCCTATGGCCCATGCTTAAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACAAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGAcc < 1:130752/206‑1 (MQ=255) tGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCCCCAAAAAGACCCAGAAAAAAGCGAAAAAAGCCGCCACAAAAACAACGACCCAAAACAAAAcccataacctaa > 2:130752/1‑218 (MQ=255) aCCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAACCGCCCGTAAAAGTACGACCCAAAGCAAAAACGCTTCTTCCGTTAAAAAATCTTc > 1:452838/1‑229 (MQ=255) ttcaaccACCCTCTGTGTTTTCTTTTTCCCCCCCCTGCTTTTAACCCGTATGGCCATGGCTAAAAAGAAGACAAGGGAGAGTTCGGCCACCCACCAAATCACCAAAAAAGCAAAAAAAAAGAAAAGCACGACACCCACCAAAAAGACCCAAAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTAcc < 2:449095/223‑1 (MQ=255) tgtgCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTCCGACCCAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATAACCCCTTCCAAAAAcc > 2:675451/1‑228 (MQ=255) tgCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCCAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAATAAAAGCACGACCAAAAGCAAAACCGATTCTTACGTTAACAAATCTTCCATTACCGATTCTAAAAACGcc > 1:616605/1‑229 (MQ=255) tgCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAACACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGATTCTTCAGTTAAAAAATCTACCATTACCGCTTCTaaaaaaccc > 2:507051/1‑225 (MQ=255) tgCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGAACGACCAAAAGCAAAACCGATTCTTACGTTAAAAAATCTTCCATTACCCCTTCTAAAAACAcc > 2:752953/1‑229 (MQ=255) tgCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGAACGACCAAAACAAAAACCGCGTCTTCCGTGAAAAAATCTTCCATAAccccaccccaaaacacc > 2:379036/1‑214 (MQ=255) tgCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAAAAGCGAAAAAAGCCCCCCGTAAAAGTACGACCAAAAGCAAAACCGATTCTTCCGTTAAAAAATATTCCATTACCGCTTCTAAAAACGc > 1:710783/1‑228 (MQ=255) tACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGCTAAAAAGAAAAGAACGGCAACCACCACAAAAACCCAGCAAACAACCAAAAAACACGCCACTAACAGTCCGACCAAAAGCAAAACCGCCTCCTCCGTTAAAAAAAATACCATTACCGCTACAAAAAAACCCaaacc > 2:248110/1‑227 (MQ=255) tACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACCCCAAAAc > 1:80028/1‑229 (MQ=255) tcTTTTCCCCCCCCTGCCTTAAACCCCTAGGCCCAACACTAAAAACAAAGACAGGAAAATTACCGCAACCACAAACAACACAAAAAAAGAAAAAAAAAAAAAAAGCGCGGAAACCACAAAAAAGACCAAAAAAACCGCAAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACt < 2:240288/228‑1 (MQ=255) tttACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGCAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTACAAAATCTTCCATTACCGCTTCTAAAAACGCCACAACt > 1:240288/1‑225 (MQ=255) tttACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACAAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCATCTAAAAACGCCAAAACTCgc > 1:512599/1‑228 (MQ=255) ccTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCg > 1:84718/1‑229 (MQ=255) ccTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCg > 1:499735/1‑229 (MQ=255) ccTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACAAACAAAAGCAAAACCGCTTCTTCCGTTAAAAACACTTCCATTACCGCTTCTACAAACGCCAAAACCCCCACCaaaaccaccg > 2:655692/1‑222 (MQ=255) ccTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAATACGACCAAAAGCAAAAACGCTTCTTCCGTTAAAAAATCTTCCATTACCGCCTCTAAAAAAGCCAAAACTCCCAGCAAACACGCCg > 2:516891/1‑229 (MQ=255) cTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTACAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAAc > 1:43509/1‑229 (MQ=255) cTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGAAAAACCGCATCTTCCGTTAAAAAATCTTCAATTACCGCCTCAAAAAACACCAAAACTCCACAAAAAAACACCGTCAAAAAAAc > 2:278754/1‑229 (MQ=255) tATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAAc > 1:427418/1‑228 (MQ=255) tGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACAAGCCGTCAATAAAACGGCCCcagcc > 1:342711/1‑229 (MQ=255) tGCTTCAAAGCAAGCCAGGGAGAGTTATGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTACGTTAAAAAATATTCCATTAACGCTTCTAAAAACGCCAAAACTCGCAGCAAAAACGCCGGCAATAAACAGGCCTaagcc > 1:396357/1‑229 (MQ=255) gcaagcCGGGAAAATTTCTGCTCCCACCAAAACCACAAAAAAACAAAAAAAAAAGAAAGGCACGCAAACAACAAAAAAAACCAAGAAAACAGCAAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTAcc < 1:246100/229‑1 (MQ=255) gTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCCTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACCCGCCGTCAATAAAACGGCCCCAGCCCGCTTTACCGAAAAggggacaaa > 2:552425/1‑221 (MQ=255) ccaCCACGCAAAACACAAAAAAAGCAGAAAAAAAGAAAACCACGGCAACCACCAAAAAGACCAAAAAAACAGCAAAAAAAGCCGCCAGAAAAAGTACGACCAAAAGAAAACCCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTa < 1:516891/226‑1 (MQ=255) aaccaccaataccccaaaaaaaGCAAAAAAAAAAAAAAGCCCGGCAACCACAAAAAAGCCCCAAAAAACAGCAAAAAAGGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTaa < 1:727534/212‑1 (MQ=255) aCTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACCCCGTCAATAAAACGGCCCCAGCCAGCTTTACCCAAAAACGTACCCAACTCAAgggaa > 2:472665/1‑227 (MQ=255) ccaaaacccaaaaaaaaGAAAAAAAAAAAAAAAGCACGCCAACAACAAAAAAGCCCAAAAAACCGGAAAAAAAACCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCt < 1:675452/217‑1 (MQ=255) cATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGGGTACCAAACGAAAGGGCtata > 1:477715/1‑229 (MQ=255) aaaaaaaaGAAAAAAAAAAAAAACCCACAGAACACACCAAAAAGCCCAAAAAAAGAGCGAAAAGATCCGCCAGTAAAAGTACGACCAAAAGAAAACCCGCTTCTCCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATAAAGCGCa < 2:628486/227‑1 (MQ=255) cAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAACCGTAAGGGCTATAAATCGCa > 1:139257/1‑228 (MQ=255) aaaaGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTCAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGACAACACTCCGTCAATAAAACAGCCTCAGCCAGCTTTACCGAAAAGTGACCCAAACGTAAGGGCTATAAATACCATtgt > 1:265394/1‑229 (MQ=255) aaaaGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAAAACACCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATAAATCGCATtg > 1:628487/1‑228 (MQ=255) gATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATAAATCGCATTTGGTGaaa > 1:136728/1‑228 (MQ=255) | TCTCTTCTTCTATGCATTAGAATCATCAAGTTTTGTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATAAATCGCATTGTGTGAAA > NC_000913/1734352‑1734794 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |