| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,132,787 | A→C | 100% | I204S (ATC→AGC) | wcaA ← | putative glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,132,787 | 0 | A | C | 100.0% | 222.6 / ‑6.7 | 79 | I204S (ATC→AGC) | wcaA | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (33/43); minor base T (0/2); total (34/45) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
CCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACT > NC_000913/2132566‑2133011 | cccGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATATTTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑g > 1:595212/1‑227 (MQ=255) ccaaactccATCAGCTAGTATTTTGTCGTTTCGCCCCGAACGCGGGGTCCGCAAAGTGGGCCAGTTTATGCGTTTATTGCGGATCTGGTAGAGGGTAAACATCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTAACCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc < 2:326569/222‑1 (MQ=255) ccGAATACCATCAGTCAGTCGTTTGGCTTTCCGCGCCGATGGAGGCGTCAGCAAAGGGCGCCAGGTCATTCGGTTATTGCGGATCTGGTAGGGGGTAAACAGCCGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc < 2:225037/229‑1 (MQ=255) ccGAAACCCACCCGCCAGGCGTTTCCCGTTACGCACCGACAGCGGGGTCAGGAAAGGGTGCCAGGTCATACGTTTATTGCGGATCTGGTAGATGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTc < 2:340519/229‑1 (MQ=255) gAATTCCATCAGCCAGACTTTTGCCGTTTCGTACCGACAGCAGCGTCAGCAATGTGCGCCAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc < 1:579628/229‑1 (MQ=255) gAATTCCATCAGCCAGACGTGTGCCGTTACTCACCGACAGCAGAGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc < 1:70854/229‑1 (MQ=255) gAATACCATCAGCCAGACGTTTGCCGTTACGCCCCGACAGCAGCGTCAGGAAAGTGCGCCAGGTCATACGTTTATTGGGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc < 1:583380/229‑1 (MQ=255) aaaTACCATCAGCCGGTCGTTTTCCGTTACGCACCGGCAGCTGGGTCAGCAAAGTGCCCGAGGTCATTCGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGc < 1:340790/228‑1 (MQ=255) acttacaccAGGCTTTTGCCGGTTCGCACCGACGGCGGCGTGAGCAAAGTGCGTCGTGTCATGCGGTTATTGGGGATCTGGTAGAGGGTACACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTATTTGGGCTTGCGGTAAAAGTGGAATTTCCCGGAGAATTTTTTCGGTTACGAGGTGATCTCCATTTTACCGTGATTGATATGCAGGCTCT‑GCGTCGCCtctt < 2:521498/222‑1 (MQ=255) cATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGAAGGCTCT‑GCGTCGTCtctt > 1:521498/1‑228 (MQ=255) tCAGCCAGACTTTGGCCGTTGCGCACCGAAAGGAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGGGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCCCCGTGATTGATATGCAGGCTCT‑GCGTc < 2:700894/219‑1 (MQ=255) tCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGCTCTGGTAGAGGGAAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGCGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTc > 1:700895/1‑219 (MQ=255) tCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTCCATTTCACCGTGATTGATATTCAGGCTCT‑GAGTCGGCTCTTCTa > 2:736092/1‑229 (MQ=255) aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGCCGAGGTGATCTGCATTTCACCGTGATTGATTTCCAGGCTTT‑GCGTCGCCTCTTCTACTTTCCAc > 1:750853/1‑229 (MQ=255) aCGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGGGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GGGTCGCGTCTTCTACTTTCCa > 1:729266/1‑228 (MQ=255) cGTTTGCCGTTTCGCACCGACAGCAGCGTCAGCAAAGTGCGACAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACg < 1:437614/229‑1 (MQ=255) gCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGCATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGTGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTc > 1:246311/1‑228 (MQ=255) gtttcgctgcGACAGCGGGGTTAGGAAAGTGGGCCGGGTTATCGGTTTAGTGCGGATTTGGTAGAGGGTAAAAGGCTGATA‑TTTTGTGCTGGCGCGGTCGAATTTGTTTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCg < 2:724268/220‑1 (MQ=255) ttACGCACCGACAGCAGTGTCAGCAAAGGGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑GTTTTTGCTAGCGCGGTCGAATTTGGCTTTGTGCTTGCGGTAAAAGTGGAAGTACCAGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCg < 1:212677/228‑1 (MQ=255) aCGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGGAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGTTGACGAGGTGATTTGCATTTCACCGTGATTGATATGCAGG‑TCTGGCGCGGCCTCTTCTACTTTCCCCCGTTCTCCGTa > 2:501885/1‑228 (MQ=255) gagcagaGGCAGCAAAGTGCGCCAGGTCTTACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTTATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGATAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTccaccac < 1:594566/227‑1 (MQ=255) aagggggcccagTCATACGTTTATTGCGGCTCTGGTAGAGGGTAAAGAGCTGATA‑TTTTTTGCTGGCTCGGTCAAATTTGTCGTTGTGCTTGCGGTAAAAGTGGAAGTCCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGaa < 2:729265/215‑1 (MQ=255) cAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGAAGGCTTT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCAACCCCCATCCGCAGGAAGagtccgta > 1:145113/1‑220 (MQ=255) cAGGGCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCATGCGGGAAAAGTGGAAGTACCCGGGGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTTGTATGCAGGCTCT‑GCGTCGCCTCGTCTACTTTCCACGGGTCGCCGTAGTCACCCGGCATACGCCGGAAGAA‑Gtagga > 2:107389/1‑223 (MQ=255) gtctgtcGTTTATTGCGGATCTGGTAGAGGGTAAACAGGTGATT‑TTTTTTGCTGGCCCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCt < 1:371568/223‑1 (MQ=255) tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCT‑GCGTCGCCCCTTCTACTTTCCCCGGTTCGCCGTCCCCCCCCACCATCC‑CCGGGAGATCGTCGTAATcccttg > 2:145965/1‑224 (MQ=255) tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGCGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGAAAAAT‑GTCGTAATCCtttg > 2:148457/1‑228 (MQ=255) tACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTGGTCTTTTTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTCCTTGATAATCAGGCTCT‑GCGGCGCCTCTTCTACTTTCCACGTTTCGCCGTACACCACAACCACCCCCAGGAAGAT‑GTCGTAATCCTCTGc > 2:178566/1‑229 (MQ=255) gtttttgtgggggagttGGTAGAGGGTAAACAGTTGATA‑GTGTTTTCTGGCGCGGGCGAATTTGTCGTTGTGGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTGTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGcc < 2:545935/213‑1 (MQ=255) tATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTTGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCCCGGTTCGCGGTACTCCACCACCATCCGCCGGACGCT‑GTCGTAATCCTGGGCCGCttt > 2:159170/1‑229 (MQ=255) ttgtgggATTTGGGGGAGGGTAAACAGGTGATA‑TTTTTTGCTGGCGGGGGCGAATTTGTCTTTGGGGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCttt < 2:246311/223‑1 (MQ=255) aTTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCCGTAAGAT‑TGCGTAATCCtgtcactcttt > 1:635728/1‑220 (MQ=255) aTTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGGGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCCGGAAGAT‑GTCGTAATCCTTTGCCGCttt > 1:196241/1‑228 (MQ=255) cGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGtt > 1:487327/1‑229 (MQ=255) cTGGTTGGGGGTAAACAGCGGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGa < 2:498706/197‑1 (MQ=255) cTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAgc > 1:498706/1‑196 (MQ=255) gttttgagGGTATAGAGGTGATT‑TTTTTGGGTGTGGCGGGTGAATTTGTTTTTGTGCTTGGGGGAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCTCCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTAt < 2:294614/224‑1 (MQ=255) ggTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaac > 1:443908/1‑228 (MQ=255) gTAAACAGGTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGATTGCGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaa < 1:487519/228‑1 (MQ=255) taaatgggtGATA‑TCTTGTTCTGGCGGGGTCGAATTTGTCTTTGTGCTTGCGGTTAAAGTGGAAGTACGCGGAGAAGTGTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTTGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca < 1:315697/221‑1 (MQ=255) aaCAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCCCTTTTCCTTTCCCCGGTTCGCCGTACTCAACCCCCACCCCCAGAGAATT‑GTCGCAACCCGTTGCCCCTCTCAATCCGGATTCCAACAAaaac > 2:70853/1‑228 (MQ=255) aaCAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGGAAAAGTGGAAGGACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACTATCCGCAGGAAGAT‑GTCGGAATCCTGTGCCGCTTCCATTTCGGTATCGcacaacacc > 2:175918/1‑224 (MQ=255) cTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAAAACCCttt > 1:333090/1‑228 (MQ=255) tGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGCT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATGGAAAAAAACCTCTTTg > 2:521149/1‑228 (MQ=255) ctgtttttttttGCTGGCGGGGTCGAATTTGTTTTTGTGCTTGGGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGAGGTTATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCttt < 2:750852/222‑1 (MQ=255) ttttttGGTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGGGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGc < 1:711607/229‑1 (MQ=255) ggtGGCGGGGTGGATTTGGTTTTTGGTGTTTCGGTAAAAGTGGAAGTTCCCGGGGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc < 2:117411/227‑1 (MQ=255) ggtGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGcc < 1:148457/227‑1 (MQ=255) cTGTCGCGGTGGATTTTGTCGTTGTGGTTGCGTTAATAGTGTAAGTACCCTGAGAAGTTTTTCGGTGACGAGGTGATCTGCCTTTCCCCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGccc < 2:145113/229‑1 (MQ=255) cTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTGCGCCGTACTCCACCACCATCCGCAGGAGGAT‑GTCGTAATCCTGTGCCGCTTTGAGTTCGGAATCGAACAAACACACTTTGAAACCCCATGcc > 1:660337/1‑228 (MQ=255) tGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCa < 2:546014/130‑1 (MQ=255) tGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCa > 1:546014/1‑130 (MQ=255) gcgcGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca > 1:583746/1‑206 (MQ=255) gcgcGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGaacaaaca < 2:583745/206‑1 (MQ=255) ttttTCTTTGTTGTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTg < 1:521149/228‑1 (MQ=255) ttGTCGTTGTGCTTGGGGTAAAAGTGGAAGTTCCCGGAGAATTTTTTCGGTGACGATGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTgg < 1:469285/228‑1 (MQ=255) tttttttGTGTTTGCGGTAAAAGGGGAAGTACCCGGAGAATTTTGTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt < 2:595211/225‑1 (MQ=255) gttcttGTTCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCGCCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGGTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAAGCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt < 1:736093/224‑1 (MQ=255) gTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt < 1:152226/228‑1 (MQ=255) gTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTGTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGtt < 1:427261/228‑1 (MQ=255) cTTTGTGCTTGCGGTAAAAGTGGATGTACCCGGAGAATTTTTTCGGTGACGGGGTGATCTTCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGc < 1:510526/228‑1 (MQ=255) gctgTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACGCTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTg < 1:175918/226‑1 (MQ=255) taacgttgAAGTTCCCTGGGAATTTTGTGGGGGACGGTGTGATCTTCTTTTCACCGTGTTTGATCTGGAGGTTTT‑GCTTCGCCTCTTCGACGTTCCACGGTTCGCAGTACTCCACCACCATCCGGAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCGTTGAAACGCCATGCCCAGGTAAAGATCTGGTTGCCAATGATATTGCGttt < 2:635727/222‑1 (MQ=255) aaaaGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCAACATCCGCAGGACGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGACCAAACACTCTTTGAAACGCCATGCCCAGGTAAAAACACGGTTGCCAAAGAAATTGCGttt > 2:93004/1‑229 (MQ=255) ggAAGTACCCGGAGAATTTTTTCGGTTACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGaa < 1:501885/229‑1 (MQ=255) gTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCCTTTCCCCGTTATTGGTATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAgg < 1:504764/229‑1 (MQ=255) tgcccGGAAGATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAggc < 1:486715/227‑1 (MQ=255) cccGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAACGACCTGGTTCCCAATGACATTGCGTTTCTAGAACAggcgg > 1:727312/1‑229 (MQ=255) ttttCGGTTACGAGGTGATCTGCATTTCCCCGTGATTGATAGGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACgg < 1:145965/229‑1 (MQ=255) tGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATTCCCAGGTAAAGACCTgg > 1:500272/1‑178 (MQ=255) tGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGAtt < 1:380060/227‑1 (MQ=255) tttGCTTTTCCCCGTGTTTGCTCTCCGGGCTCT‑CCGTGCCCTCTTCTCCCTTCCACGGTTCGCCGTACTCCACCCCCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCgg < 2:333090/227‑1 (MQ=255) cACCGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACAATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGAAAAGACCTGGATGCCAATGTTATTGGGTTTGGAGAACAGACGGCGTGCATACGGCGAGTTGGGAAACAGCTGCAAGCATGc > 1:268389/1‑229 (MQ=255) cGTGATTGATATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCTCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACTAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTCCCAATGATATTGCGTTTGTAGTACAGTCGGCGTGACTACGTCGATTTGGGATACAGCGGCCAGCTTGACgg > 1:225887/1‑229 (MQ=255) tgattgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAAAAGGCGGCGTGAAAACGGCGCATTGGGATCCAGCGGCAAGCTTGCCgg > 1:223483/1‑227 (MQ=255) tgattgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGACGACCAGGCGGCGGGAATACGGCCAATTTGGTAACACCGTCAAGCTTGGCGGtt > 2:233418/1‑229 (MQ=255) attgatATGCAGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGACGCT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGCGGGGAATACGGGGGTTTGGGATACAGCGGCAAGATTTCCgggggg > 2:502524/1‑225 (MQ=255) gatATGCCGGCTCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGaa < 1:233418/229‑1 (MQ=255) gaGGTTCT‑GCGTCCCGTCTTCTTACTGCCAGGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCGGGGCCGCTTTCAGTTCGGTATCGAACAAACTCTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACt < 2:220310/228‑1 (MQ=255) | CCCGAATACCATCAGCCAGACGTTTGCCGTTACGCACCGACAGCAGCGTCAGCAAAGTGCGCCAGGTCATACGTTTATTGCGGATCTGGTAGAGGGTAAACAGCTGATA‑TTTTTTGCTGGCGCGGTCGAATTTGTCTTTGTGCTTGCGGTAAAAGTGGAAGTACCCGGAGAATTTTTTCGGTGACGAGGTGATCTGCATTTCACCGTGATTGATATGCAGGATCT‑GCGTCGCCTCTTCTACTTTCCACGGTTCGCCGTACTCCACCACCATCCGCAGGAAGAT‑GTCGTAATCCTGTGCCGCTTTCAGTTCGGTATCGAACAAACACTCTTTGAAACGCCATGCCCAGGTAAAGACCTGGTTGCCAATGATATTGCGTTTGTAGAACAGGCGGCGTGAATACGGCGATTTGGGATACAGCGGCAAGCTTGCCGGTTGGGAATAGACT > NC_000913/2132566‑2133011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |